Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1818 Papaver somniferum HOM05D005535 ORTHO05D006753 4.4e-144 515.0 343 100.0
PSO017G0680 Papaver somniferum HOM05D005535 ORTHO05D006753 3.5e-133 478.8 361 82.0
TAR629G1161 Trochodendron aralioides HOM05D005535 ORTHO05D006753 6.3e-66 255.4 283 54.4
TAR371G0260 Trochodendron aralioides HOM05D005535 ORTHO05D006753 1.8e-65 253.8 286 54.9
Dinv19929 Davidia involucrata HOM05D005535 ORTHO05D006753 1.6e-64 250.8 294 54.4
CSS0007804 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 2.9e-63 246.5 250 59.6
Actinidia04914 Actinidia chinensis HOM05D005535 ORTHO05D006753 5.0e-63 245.7 247 60.3
Actinidia37646 Actinidia chinensis HOM05D005535 ORTHO05D006753 1.5e-62 244.2 247 59.5
Thecc.03G081300 Theobroma cacao HOM05D005535 ORTHO05D006753 3.3e-62 243.0 284 53.5
vmacro17524 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 3.3e-62 243.0 249 59.4
Dinv38677 Davidia involucrata HOM05D005535 ORTHO05D006753 4.2e-62 242.7 280 55.7
Aqoxy3G00718 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 2.8e-61 240.0 319 50.2
Lj9A460T58 Lonicera japonica HOM05D005535 ORTHO05D006753 2.8e-61 240.0 290 51.0
Duzib084G1387 Durio zibethinus HOM05D005535 ORTHO05D006753 6.1e-61 238.8 282 51.1
Hma1.2p1_1617F.1_g293810 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 8.0e-61 238.4 240 59.6
Duzib205G0302 Durio zibethinus HOM05D005535 ORTHO05D006753 4.0e-60 236.1 297 49.2
Rhsim08G0158400 Rhododendron simsii HOM05D005535 ORTHO05D006753 1.5e-59 234.2 250 57.6
Ciclev10020848m.g Citrus clementina HOM05D005535 ORTHO05D006753 3.4e-59 233.0 293 50.2
GSVIVG01008044001 Vitis vinifera HOM05D005535 ORTHO05D006753 5.7e-59 232.3 293 51.9
Atru.chr9.2302 Acer truncatum HOM05D005535 ORTHO05D006753 9.8e-59 231.5 290 50.0
Actinidia34981 Actinidia chinensis HOM05D005535 ORTHO05D006753 2.2e-58 230.3 252 56.7
Actinidia19054 Actinidia chinensis HOM05D005535 ORTHO05D006753 2.8e-58 229.9 247 57.1
CSS0007998 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 2.8e-58 229.9 247 56.7
Nn3g17153 Nelumbo nucifera HOM05D005535 ORTHO05D006753 2.8e-58 229.9 279 53.0
Cc04_g15390 Coffea canephora HOM05D005535 ORTHO05D006753 1.4e-57 227.6 249 55.4
vmacro16564 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 1.8e-57 227.3 248 56.5
Nitab4.5_0004785g0010 Nicotiana tabacum HOM05D005535 ORTHO05D006753 7.0e-57 225.3 293 49.5
Hund09363 Selenicereus undatus HOM05D005535 ORTHO05D006753 9.2e-57 224.9 290 52.8
EL10Ac5g10956 Beta vulgaris HOM05D005535 ORTHO05D006753 1.2e-56 224.6 296 49.0
Gohir.A12G175600 Gossypium hirsutum HOM05D005535 ORTHO05D006753 1.2e-56 224.6 247 54.3
MBI01_g12912_MAGBIO Magnolia biondii HOM05D005535 ORTHO05D006753 2.0e-56 223.8 232 56.5
QL10p015851 Quercus lobata HOM05D005535 ORTHO05D006753 2.0e-56 223.8 301 49.5
Manes.06G095400 Manihot esculenta HOM05D005535 ORTHO05D006753 3.5e-56 223.0 299 49.2
Gohir.D12G178800 Gossypium hirsutum HOM05D005535 ORTHO05D006753 5.9e-56 222.2 290 49.0
Migut.I00138 Erythranthe guttata HOM05D005535 ORTHO05D006753 1.7e-55 220.7 246 54.9
Cfa018977 Carpinus fangiana HOM05D005535 ORTHO05D006753 2.9e-55 219.9 297 48.8
HanXRQChr09g0271071 Helianthus annuus HOM05D005535 ORTHO05D006753 5.0e-55 219.2 283 47.3
Lj5A114T27 Lonicera japonica HOM05D005535 ORTHO05D006753 5.0e-55 219.2 198 62.1
ECA232G4425 Erigeron canadensis HOM05D005535 ORTHO05D006753 8.6e-55 218.4 244 51.2
Eucgr.B00441 Eucalyptus grandis HOM05D005535 ORTHO05D006753 8.6e-55 218.4 283 48.8
MSTRG.11394 Avicennia marina HOM05D005535 ORTHO05D006753 1.1e-54 218.0 244 53.3
Rhsim12G0158200 Rhododendron simsii HOM05D005535 ORTHO05D006753 1.1e-54 218.0 245 55.1
Gorai.008G191600 Gossypium raimondii HOM05D005535 ORTHO05D006753 1.5e-54 217.6 299 48.2
Nitab4.5_0000785g0140 Nicotiana tabacum HOM05D005535 ORTHO05D006753 2.5e-54 216.9 299 48.8
Cpa.g.sc17.224 Carica papaya HOM05D005535 ORTHO05D006753 4.3e-54 216.1 288 49.7
PGSC0003DMG401018143 Solanum tuberosum HOM05D005535 ORTHO05D006753 1.2e-53 214.5 286 49.0
Haze_07363 Corylus avellana HOM05D005535 ORTHO05D006753 1.6e-53 214.2 272 51.8
Prupe.5G188200 Prunus persica HOM05D005535 ORTHO05D006753 2.1e-53 213.8 273 51.3
AUR62021726 Chenopodium quinoa HOM05D005535 ORTHO05D006753 2.8e-53 213.4 294 46.9
Ah.02g113290 Amaranthus hybridus HOM05D005535 ORTHO05D006753 1.4e-52 211.1 298 50.3
AUR62008371 Chenopodium quinoa HOM05D005535 ORTHO05D006753 1.4e-52 211.1 291 47.4
CiPaw.12G015700 Carya illinoinensis HOM05D005535 ORTHO05D006753 3.1e-52 209.9 247 53.4
SGA_v2.0_scaffold56G20044 Striga asiatica HOM05D005535 ORTHO05D006753 4.0e-52 209.5 277 46.6
Nitab4.5_0004931g0020 Nicotiana tabacum HOM05D005535 ORTHO05D006753 5.2e-52 209.1 280 47.1
Nitab4.5_0000269g0110 Nicotiana tabacum HOM05D005535 ORTHO05D006753 6.8e-52 208.8 261 51.0
PSO832G1146 Papaver somniferum HOM05D005535 ORTHO05D006753 8.9e-52 208.4 269 52.0
TWI60G0583 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 8.9e-52 208.4 233 57.5
Lj1g0015301 Lotus japonicus HOM05D005535 ORTHO05D006753 4.4e-51 206.1 248 51.6
Sed0009946 Sechium edule HOM05D005535 ORTHO05D006753 4.4e-51 206.1 250 54.4
SalBow5G0107 Salvia bowleyana HOM05D005535 ORTHO05D006753 1.3e-50 204.5 241 53.5
SalBow5G2281 Salvia bowleyana HOM05D005535 ORTHO05D006753 1.3e-50 204.5 241 53.5
Peaxi162Scf00009g00219 Petunia axillaris HOM05D005535 ORTHO05D006753 2.2e-50 203.8 260 48.8
Sopen03g032160 Solanum pennellii HOM05D005535 ORTHO05D006753 4.9e-50 202.6 293 47.1
COL.COLO4_14041 Corchorus olitorius HOM05D005535 ORTHO05D006753 6.4e-50 202.2 293 44.4
Glyma.17G098100 Glycine max HOM05D005535 ORTHO05D006753 8.3e-50 201.8 252 48.0
Solyc06g070970.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 8.3e-50 201.8 253 51.0
ClCG06G016340 Citrullus lanatus HOM05D005535 ORTHO05D006753 1.9e-49 200.7 250 53.2
Solyc03g113090.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 2.4e-49 200.3 294 48.6
PSO591G0334 Papaver somniferum HOM05D005535 ORTHO05D006753 3.2e-49 199.9 270 49.3
Hma1.2p1_0104F.1_g050150 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 4.1e-49 199.5 312 45.2
FAN08G2745 Fragaria x ananassa HOM05D005535 ORTHO05D006753 5.4e-49 199.1 231 54.5
Peaxi162Scf00013g00129 Petunia axillaris HOM05D005535 ORTHO05D006753 7.0e-49 198.7 196 54.1
Aqoxy3G03311 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 1.6e-48 197.6 281 44.5
Ca_21840_v3 Cicer arietinum L. HOM05D005535 ORTHO05D006753 1.6e-48 197.6 250 48.0
FAN18G1286 Fragaria x ananassa HOM05D005535 ORTHO05D006753 1.6e-48 197.6 234 53.4
FvH4_5g15300 Fragaria vesca HOM05D005535 ORTHO05D006753 2.0e-48 197.2 246 50.8
Medtr4g108100 Medicago truncatula HOM05D005535 ORTHO05D006753 2.0e-48 197.2 243 48.1
Oeu006178.3 Olea europaea HOM05D005535 ORTHO05D006753 2.7e-48 196.8 224 54.5
PGR083G2381 Punica granatum HOM05D005535 ORTHO05D006753 3.5e-48 196.4 280 46.8
arahy.Tifrunner.gnm1.ann1.WGP01G Arachis hypogaea HOM05D005535 ORTHO05D006753 4.6e-48 196.1 259 46.3
MELO3C017158.2 Cucumis melo HOM05D005535 ORTHO05D006753 4.6e-48 196.1 252 51.2
FAN13G1299 Fragaria x ananassa HOM05D005535 ORTHO05D006753 4.6e-48 196.1 243 53.9
Sopen06g027240 Solanum pennellii HOM05D005535 ORTHO05D006753 7.8e-48 195.3 253 49.4
Oeu022201.1 Olea europaea HOM05D005535 ORTHO05D006753 1.0e-47 194.9 261 49.8
RcHm_v2.0_Chr7g0180761 Rosa chinensis HOM05D005535 ORTHO05D006753 1.0e-47 194.9 275 47.3
CANSAT80G1786 Cannabis sativa HOM05D005535 ORTHO05D006753 3.0e-47 193.4 265 47.5
Glyma.04G173200 Glycine max HOM05D005535 ORTHO05D006753 3.9e-47 193.0 298 45.3
TPR.G27376 Trifolium pratense HOM05D005535 ORTHO05D006753 6.6e-47 192.2 266 46.6
CsaV3_1G002190 Cucumis sativus L. HOM05D005535 ORTHO05D006753 1.9e-46 190.7 251 51.4
Glyma.05G028700 Glycine max HOM05D005535 ORTHO05D006753 1.9e-46 190.7 251 47.4
VMungo1215G1657 Vigna mungo HOM05D005535 ORTHO05D006753 2.5e-46 190.3 244 48.4
CAN.G628.33 Capsicum annuum HOM05D005535 ORTHO05D006753 3.3e-46 189.9 218 52.8
Glyma.06G191000 Glycine max HOM05D005535 ORTHO05D006753 7.3e-46 188.7 287 45.6
Sc10g0009960 Simmondsia chinensis HOM05D005535 ORTHO05D006753 7.3e-46 188.7 239 50.6
VMungo1309G2126 Vigna mungo HOM05D005535 ORTHO05D006753 1.2e-45 188.0 245 49.4
ATR1120G167 Amborella trichopoda HOM05D005535 ORTHO05D006753 2.1e-45 187.2 221 50.7
arahy.Tifrunner.gnm1.ann1.G5WMYY Arachis hypogaea HOM05D005535 ORTHO05D006753 2.1e-45 187.2 242 46.7
Lj4g0008602 Lotus japonicus HOM05D005535 ORTHO05D006753 2.8e-45 186.8 280 42.5
FAN04G1197 Fragaria x ananassa HOM05D005535 ORTHO05D006753 6.2e-45 185.7 243 52.3
Phvul.009G189600 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 6.2e-45 185.7 248 49.6
Lalb_Chr12g0196771 Lupinus albus HOM05D005535 ORTHO05D006753 8.0e-45 185.3 287 43.2
THA.LOC104821430 Tarenaya hassleriana HOM05D005535 ORTHO05D006753 4.0e-44 183.0 234 49.6
Sed0000211 Sechium edule HOM05D005535 ORTHO05D006753 8.9e-44 181.8 229 52.0
Lalb_Chr13g0303381 Lupinus albus HOM05D005535 ORTHO05D006753 5.8e-43 179.1 281 43.8
HanXRQChr05g0158021 Helianthus annuus HOM05D005535 ORTHO05D006753 1.3e-42 177.9 238 47.9
Sabra15G0089300 Salix brachista HOM05D005535 ORTHO05D006753 1.7e-42 177.6 256 49.2
MD06G1189400 Malus domestica HOM05D005535 ORTHO05D006753 2.9e-42 176.8 236 49.6
Psat4g052400 Pisum sativum HOM05D005535 ORTHO05D006753 4.1e-41 172.9 257 44.7
SGA_v2.0_scaffold162G37926 Striga asiatica HOM05D005535 ORTHO05D006753 2.1e-40 170.6 257 44.0
Os06g0589500 Oryza sativa ssp. japonica HOM05D005535 ORTHO05D006753 3.5e-40 169.9 267 44.2
Potri.015G063700 Populus trichocarpa HOM05D005535 ORTHO05D006753 4.6e-40 169.5 235 49.8
Phvul.003G191800 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 1.7e-39 167.5 242 46.7
MD14G1196400 Malus domestica HOM05D005535 ORTHO05D006753 3.0e-39 166.8 243 46.9
Zm00001eb386190 Zea mays HOM05D005535 ORTHO05D006753 6.6e-39 165.6 245 44.9
HPP92_024074 Vanilla planifolia HOM05D005535 ORTHO05D006753 8.6e-39 165.2 241 46.1
Zm00001eb277070 Zea mays HOM05D005535 ORTHO05D006753 8.6e-39 165.2 246 45.1
Sp2g25720 Schrenkiella parvula HOM05D005535 ORTHO05D006753 1.5e-38 164.5 232 45.7
Lsat_1_v5_gn_5_19040 Lactuca sativa HOM05D005535 ORTHO05D006753 4.3e-38 162.9 243 44.4
Thhalv10004313m.g Eutrema salsugineum HOM05D005535 ORTHO05D006753 7.3e-38 162.2 232 43.5
BraA06t25881Z Brassica rapa HOM05D005535 ORTHO05D006753 1.2e-37 161.4 234 46.6
Aa31LG11G1090 Aethionema arabicum HOM05D005535 ORTHO05D006753 2.1e-37 160.6 233 45.5
A06p29250 Brassica napus HOM05D005535 ORTHO05D006753 1.2e-35 154.8 234 45.3
AT5G62550 Arabidopsis thaliana HOM05D005535 ORTHO05D006753 2.6e-35 153.7 233 44.6
BcaB02g09657 Brassica carinata HOM05D005535 ORTHO05D006753 2.6e-35 153.7 236 44.1
AL8G39440 Arabidopsis lyrata HOM05D005535 ORTHO05D006753 4.4e-35 152.9 260 40.8
BcaC01g02485 Brassica carinata HOM05D005535 ORTHO05D006753 9.9e-35 151.8 230 45.7
C03p64280 Brassica napus HOM05D005535 ORTHO05D006753 9.9e-35 151.8 230 45.7
BolC3t18683H Brassica oleracea HOM05D005535 ORTHO05D006753 9.9e-35 151.8 230 45.7
Carub.0008s2322 Capsella rubella HOM05D005535 ORTHO05D006753 4.9e-34 149.4 237 43.9
PGSC0003DMG400033073 Solanum tuberosum HOM05D005535 ORTHO05D006753 4.9e-34 149.4 253 40.3
unitig_26.g9639 Utricularia gibba HOM05D005535 ORTHO05D006753 1.2e-29 134.8 278 39.6
SEGI_01090 Sequoiadendron giganteum HOM05D005535 ORTHO05D006753 3.6e-21 106.7 228 34.2
TWI34G0031 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 4.8e-21 106.3 141 47.5
Actinidia03741 Actinidia chinensis HOM05D008415 ORTHO05D010601 7.6e-11 72.4 92 43.5
Nitab4.5_0000650g0050 Nicotiana tabacum HOM05D008415 ORTHO05D010601 1.3e-10 71.6 77 46.8
CAN.G631.8 Capsicum annuum HOM05D008415 ORTHO05D010601 1.1e-09 68.6 180 30.6
Lj3g0013437 Lotus japonicus HOM05D008415 ORTHO05D010601 1.1e-09 68.6 74 43.2
Phvul.011G073700 Phaseolus vulgaris HOM05D008415 ORTHO05D010601 1.4e-09 68.2 56 53.6
arahy.Tifrunner.gnm1.ann1.TY33PY Arachis hypogaea HOM05D008415 ORTHO05D010601 1.9e-09 67.8 56 53.6
SalBow3G0300 Salvia bowleyana HOM05D008415 ORTHO05D010601 2.4e-09 67.4 77 42.9
VMungo1127G1728 Vigna mungo HOM05D008415 ORTHO05D010601 2.4e-09 67.4 75 41.3
arahy.Tifrunner.gnm1.ann1.C7LIDW Arachis hypogaea HOM05D008415 ORTHO05D010601 3.2e-09 67.0 56 53.6
Lalb_Chr19g0137361 Lupinus albus HOM05D008415 ORTHO05D010601 3.2e-09 67.0 74 41.9
CANSAT54G1687 Cannabis sativa HOM05D008415 ORTHO05D010601 5.4e-09 66.2 107 39.3
Eucgr.J00943 Eucalyptus grandis HOM05D008415 ORTHO05D010601 5.4e-09 66.2 119 37.0
Oeu059099.1 Olea europaea HOM05D008415 ORTHO05D010601 7.1e-09 65.9 106 35.8
Rhsim01G0218700 Rhododendron simsii HOM05D008415 ORTHO05D010601 7.1e-09 65.9 56 53.6
Glyma.12G070700 Glycine max HOM05D008415 ORTHO05D010601 9.3e-09 65.5 163 30.7
Sed0001336 Sechium edule HOM05D008415 ORTHO05D010601 9.3e-09 65.5 109 35.8
GSVIVG01025161001 Vitis vinifera HOM05D008415 ORTHO05D010601 9.3e-09 65.5 204 31.9
Hma1.2p1_2585F.1_g324920 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 1.6e-08 64.7 138 31.9
Hma1.2p1_1931F.1_g307990 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 2.1e-08 64.3 138 31.9
Ca_19250_v3 Cicer arietinum L. HOM05D008415 ORTHO05D010601 3.5e-08 63.5 56 50.0
Cc01_g11390 Coffea canephora HOM05D008415 ORTHO05D010601 3.5e-08 63.5 117 35.0
QL01p023166 Quercus lobata HOM05D008415 ORTHO05D010601 4.6e-08 63.2 206 30.1
Psat7g223880 Pisum sativum HOM05D008415 ORTHO05D010601 6.0e-08 62.8 124 31.5
TAR633G1891 Trochodendron aralioides HOM05D008415 ORTHO05D010601 1.0e-07 62.0 215 28.8
ClCG02G021040 Citrullus lanatus HOM05D008415 ORTHO05D010601 1.3e-07 61.6 141 29.8
Peaxi162Scf00351g00214 Petunia axillaris HOM05D008415 ORTHO05D010601 1.3e-07 61.6 142 31.0
unitig_46.g18232 Utricularia gibba HOM05D008415 ORTHO05D010601 1.3e-07 61.6 107 33.6
CsaV3_6G021730 Cucumis sativus L. HOM05D008415 ORTHO05D010601 1.8e-07 61.2 141 31.9
vmacro14451 Vaccinium macrocarpon HOM05D008415 ORTHO05D010601 1.8e-07 61.2 147 32.0
MD01G1041800 Malus domestica HOM05D005535 ORTHO05D006753 3.9e-07 60.1 36 77.8
Medtr4g060050 Medicago truncatula HOM05D008415 ORTHO05D010601 5.1e-07 59.7 155 32.9
CSS0041118 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 6.7e-07 59.3 87 35.6
Migut.D02196 Erythranthe guttata HOM05D008415 ORTHO05D010601 6.7e-07 59.3 192 30.2
ECA238G2082 Erigeron canadensis HOM05D008415 ORTHO05D010601 1.1e-06 58.5 57 47.4
Solyc11g069210.2 Solanum lycopersicum HOM05D008415 ORTHO05D010601 1.1e-06 58.5 190 29.5
PGSC0003DMG400008064 Solanum tuberosum HOM05D008415 ORTHO05D010601 1.1e-06 58.5 196 27.6
PGR119G0199 Punica granatum HOM05D008415 ORTHO05D010601 1.5e-06 58.2 125 36.0
MSTRG.18650 Avicennia marina HOM05D008415 ORTHO05D010601 2.5e-06 57.4 179 28.5
Sopen11g027940 Solanum pennellii HOM05D008415 ORTHO05D010601 2.5e-06 57.4 204 29.4
Cc07_g02980 Coffea canephora HOM05D008415 ORTHO05D010601 3.3e-06 57.0 80 38.8
MELO3C025762.2 Cucumis melo HOM05D008415 ORTHO05D010601 4.3e-06 56.6 182 29.1
Glyma.11G154841 Glycine max HOM05D008415 ORTHO05D010601 4.3e-06 56.6 175 30.9
SGA_v2.0_scaffold61G21159 Striga asiatica HOM05D008415 ORTHO05D010601 4.3e-06 56.6 149 30.9
HanXRQChr14g0445691 Helianthus annuus HOM05D008415 ORTHO05D010601 5.6e-06 56.2 139 31.7
Aqoxy2G01080 Aquilegia oxysepala HOM05D008415 ORTHO05D010601 9.6e-06 55.5 56 46.4
TPR.G15532 Trifolium pratense HOM05D008415 ORTHO05D010601 9.6e-06 55.5 58 48.3


User provided reference genes

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