Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 0.0e+00 1255.7 619 100.0
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 0.0e+00 1193.7 617 95.3
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 5.7e-259 897.5 577 75.9
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 1.7e-258 896.0 629 72.3
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 2.3e-255 885.6 577 75.2
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 9.5e-254 880.2 632 69.5
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 3.6e-253 878.2 582 73.4
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.0e-252 875.2 581 73.0
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 4.9e-250 867.8 633 68.2
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 4.9e-250 867.8 633 68.1
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 8.3e-250 867.1 578 71.3
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.4e-249 866.3 581 72.3
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.8e-249 865.9 578 71.1
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 1.8e-249 865.9 612 70.3
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.3e-247 859.0 578 70.4
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 3.9e-247 858.2 572 71.7
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 6.6e-247 857.4 572 71.2
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.1e-246 856.7 602 69.3
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 5.6e-246 854.4 578 72.1
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 9.5e-246 853.6 647 66.3
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 1.6e-245 852.8 571 72.0
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 8.0e-245 850.5 715 62.4
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.4e-244 849.7 571 72.0
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 1.8e-244 849.4 577 71.1
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 2.0e-243 845.9 594 71.0
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 8.3e-242 840.5 617 66.5
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 1.1e-241 840.1 584 70.0
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 1.9e-241 839.3 582 69.8
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.9e-241 839.3 630 65.6
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 2.4e-241 839.0 573 70.9
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 2.4e-241 839.0 606 68.5
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 2.4e-241 839.0 580 69.7
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 3.2e-241 838.6 633 67.5
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.2e-240 836.6 629 65.3
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.6e-240 836.3 630 66.5
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 2.0e-240 835.9 613 66.2
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 2.0e-240 835.9 569 69.8
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.5e-240 835.1 613 66.1
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.7e-239 832.8 628 67.4
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 2.3e-239 832.4 580 69.1
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 3.0e-239 832.0 571 70.4
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 3.0e-239 832.0 623 64.5
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.9e-239 831.6 613 66.1
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 5.0e-239 831.2 582 67.5
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.0e-239 831.2 613 65.9
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 8.6e-239 830.5 577 70.2
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.6e-238 827.8 612 65.2
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 5.6e-238 827.8 624 64.6
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 7.3e-238 827.4 601 67.1
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 9.5e-238 827.0 586 68.1
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.2e-237 826.6 571 69.0
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.2e-237 826.6 571 69.7
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 1.6e-237 826.2 577 68.5
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 3.6e-237 825.1 570 70.9
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 6.2e-237 824.3 575 69.2
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 6.2e-237 824.3 577 69.3
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.4e-236 823.2 612 66.0
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 1.4e-236 823.2 571 69.2
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 6.8e-236 820.8 576 67.4
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.0e-235 819.3 571 68.7
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 9.8e-235 817.0 597 66.5
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.3e-234 816.6 575 68.5
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 1.3e-234 816.6 575 68.2
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.7e-234 816.2 579 68.4
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.7e-234 816.2 571 68.7
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 2.9e-234 815.5 579 68.2
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 6.4e-234 814.3 580 68.8
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 8.3e-234 813.9 580 67.2
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 6.6e-231 804.3 578 67.3
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.6e-229 799.7 629 62.5
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 2.1e-229 799.3 572 66.1
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 6.2e-229 797.7 573 67.9
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 3.2e-225 785.4 581 65.9
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 3.5e-224 781.9 529 70.5
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 2.3e-223 779.2 599 63.8
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 1.5e-222 776.5 595 64.2
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 7.3e-222 774.2 539 69.6
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 3.6e-221 771.9 600 63.5
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 3.6e-221 771.9 600 63.5
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.4e-220 770.0 575 65.6
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 3.1e-220 768.8 571 64.8
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 3.8e-218 761.9 596 63.3
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.7e-215 753.1 571 63.9
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 1.7e-215 753.1 593 62.9
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 6.6e-215 751.1 577 64.0
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 9.6e-214 747.3 555 65.6
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.4e-212 743.4 578 63.7
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.5e-211 740.0 577 62.9
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 2.2e-210 736.1 569 63.6
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 6.9e-204 714.5 571 61.8
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 2.4e-196 689.5 572 60.8
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.5e-195 686.8 605 59.7
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.6e-189 666.8 579 58.2
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 9.0e-188 661.0 545 59.6
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 4.5e-187 658.7 573 58.3
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 6.3e-181 638.3 580 55.0
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 6.7e-175 618.2 607 52.4
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 1.7e-170 603.6 580 52.1
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 4.2e-169 599.0 565 51.9
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.9e-162 576.2 467 60.2
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 4.2e-153 545.8 374 69.5
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 4.1e-116 422.9 515 46.8
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 2.9e-109 400.2 255 73.7
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.3e-88 331.6 210 73.3
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 1.9e-73 281.2 186 71.5
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 2.2e-56 224.6 195 57.9
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 5.3e-55 219.9 179 60.3
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.2e-45 188.0 107 78.5
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 4.0e-34 150.6 133 59.4
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 2.0e-25 121.7 65 80.0
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 5.7e-25 120.2 110 50.9
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 1.8e-23 115.2 80 70.0
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 5.4e-23 113.6 65 75.4
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 4.1e-15 87.4 67 65.7
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 6.0e-14 83.6 40 90.0
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 6.2e-11 73.6 43 79.1
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 5.8e-09 67.0 39 74.4
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 1.9e-07 62.0 134 34.3


User provided reference genes

Program Settings