Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 9.2e-184 646.7 324 100.0
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 1.1e-173 613.2 326 94.8
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 1.8e-94 350.1 332 56.6
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 1.5e-93 347.1 282 62.4
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 2.0e-93 346.7 282 62.4
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 5.7e-93 345.1 338 56.2
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 7.5e-93 344.7 265 66.0
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 7.5e-93 344.7 332 57.2
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 6.3e-92 341.7 246 65.4
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 6.3e-92 341.7 335 57.0
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.8e-91 340.1 279 62.7
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.6e-90 337.0 235 70.2
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 2.0e-90 336.7 329 54.4
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.5e-90 335.9 235 70.2
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 4.5e-90 335.5 258 63.6
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 4.5e-90 335.5 266 63.2
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 5.9e-90 335.1 240 67.9
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 7.8e-90 334.7 302 59.9
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 5.0e-89 332.0 329 56.8
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.5e-88 330.5 229 70.7
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 1.9e-88 330.1 245 65.7
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 4.3e-88 328.9 240 66.7
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 5.6e-88 328.6 239 65.7
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.6e-87 327.0 280 61.4
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 4.7e-87 325.5 268 59.3
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 1.0e-86 324.3 297 56.2
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.4e-86 323.9 259 60.2
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 2.3e-86 323.2 331 55.6
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 2.3e-86 323.2 236 64.8
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 3.1e-86 322.8 323 55.4
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 6.8e-86 321.6 262 60.7
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.2e-85 320.9 268 61.9
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 2.0e-85 320.1 274 59.9
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 2.0e-85 320.1 233 61.8
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 2.6e-85 319.7 251 61.8
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 2.6e-85 319.7 251 61.8
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.6e-85 319.7 268 61.6
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 3.4e-85 319.3 251 61.4
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 4.4e-85 318.9 331 55.3
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 4.4e-85 318.9 236 64.0
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.4e-85 318.9 236 64.0
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 7.5e-85 318.2 332 49.7
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 1.3e-84 317.4 329 53.8
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.3e-84 317.4 236 64.0
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 1.7e-84 317.0 255 60.8
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 2.2e-84 316.6 266 58.6
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 4.9e-84 315.5 251 62.9
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 8.3e-84 314.7 335 52.5
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 8.3e-84 314.7 331 52.0
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 1.1e-83 314.3 329 53.5
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 1.1e-83 314.3 329 50.8
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 1.1e-83 314.3 284 57.0
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 1.1e-83 314.3 326 52.1
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.1e-83 314.3 236 63.1
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 1.1e-83 314.3 329 51.7
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 1.4e-83 313.9 266 60.5
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 1.9e-83 313.5 330 53.0
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 1.9e-83 313.5 322 53.1
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 4.1e-83 312.4 327 51.7
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 4.1e-83 312.4 250 61.6
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 5.4e-83 312.0 254 60.6
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 5.4e-83 312.0 329 51.4
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 7.0e-83 311.6 329 53.2
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 7.0e-83 311.6 251 59.8
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 7.0e-83 311.6 319 53.0
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 9.2e-83 311.2 324 51.2
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 2.0e-82 310.1 251 60.2
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 3.5e-82 309.3 252 59.9
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 4.6e-82 308.9 320 52.8
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 6.0e-82 308.5 346 51.2
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 7.8e-82 308.1 251 61.4
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.0e-81 307.8 324 53.4
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 1.0e-81 307.8 256 59.4
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 1.0e-81 307.8 296 55.1
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 3.9e-81 305.8 254 59.1
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 6.6e-81 305.1 252 61.1
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.5e-80 303.9 318 49.4
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.9e-80 303.5 254 59.8
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 2.5e-80 303.1 251 59.4
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 3.3e-80 302.8 247 60.7
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 7.3e-80 301.6 217 65.4
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.8e-79 299.7 334 50.0
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.8e-79 299.7 334 50.0
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.6e-79 299.3 250 58.4
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.1e-78 297.7 249 57.4
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 1.1e-78 297.7 250 58.8
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 5.2e-78 295.4 244 59.4
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 1.2e-77 294.3 235 60.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.2e-77 294.3 215 64.7
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 8.3e-76 288.1 303 52.5
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 9.2e-75 284.6 261 54.0
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 1.6e-74 283.9 248 56.5
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 3.3e-72 276.2 243 55.6
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 5.6e-72 275.4 247 55.5
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 7.3e-72 275.0 310 51.3
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 3.4e-69 266.2 389 41.6
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.7e-68 263.8 326 48.2
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.4e-67 260.8 303 50.5
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 7.6e-61 238.4 236 50.4
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.3e-55 221.1 166 62.7
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 6.2e-55 218.8 290 45.9
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.1e-54 216.5 160 64.4
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.5e-53 214.2 239 46.9
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.4e-51 207.6 240 48.8
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.4e-51 207.6 240 48.3
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 1.9e-48 197.2 146 66.4
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.8e-47 192.6 138 64.5
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.4e-46 191.0 240 41.7
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 6.9e-46 188.7 253 39.9
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 4.5e-45 186.0 241 39.8
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 5.8e-45 185.7 185 54.1
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.2e-42 177.9 158 51.9
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.3e-41 174.5 146 59.6
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.8e-39 166.8 178 50.0
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 4.5e-37 159.5 152 50.7
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.1e-35 154.8 96 75.0
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.2e-35 152.9 111 64.9
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 1.5e-32 144.4 145 51.7
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 9.6e-32 141.7 104 66.3
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.2e-29 134.8 141 45.4
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 1.1e-27 128.3 111 61.3
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 1.8e-22 110.9 240 32.1
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.3e-17 94.0 64 67.2
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 4.5e-13 79.7 78 53.8
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 5.0e-12 76.3 81 51.9


User provided reference genes

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