Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 3.1e-265 917.9 461 100.0
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 4.1e-262 907.5 461 98.9
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 4.7e-189 664.8 457 70.9
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 1.5e-187 659.8 464 71.3
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 1.1e-185 653.7 468 69.4
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 2.4e-185 652.5 463 69.3
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 1.6e-184 649.8 463 70.6
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 2.0e-184 649.4 461 70.3
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 2.0e-184 649.4 461 70.1
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 2.6e-184 649.0 461 69.8
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 3.5e-184 648.7 461 69.8
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 2.2e-183 646.0 480 69.4
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.5e-182 642.5 466 69.1
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 4.2e-182 641.7 461 69.0
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 2.7e-181 639.0 461 68.1
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 4.7e-181 638.3 462 69.7
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 4.7e-181 638.3 466 68.9
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 4.7e-181 638.3 466 67.8
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 8.0e-181 637.5 457 69.4
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.0e-180 637.1 465 68.6
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 1.4e-180 636.7 480 67.9
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 4.0e-180 635.2 463 69.1
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 4.0e-180 635.2 512 63.7
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 4.0e-180 635.2 464 70.3
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 6.7e-180 634.4 463 69.8
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 1.1e-179 633.6 460 67.6
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 9.7e-179 630.6 458 67.9
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 1.3e-178 630.2 463 66.7
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 2.2e-178 629.4 464 67.9
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 4.8e-178 628.2 452 70.4
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 8.2e-178 627.5 477 67.7
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 1.1e-177 627.1 458 67.0
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 2.4e-177 625.9 466 68.9
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 3.1e-177 625.5 466 67.0
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 4.1e-177 625.2 466 68.7
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.2e-176 623.6 466 68.5
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.0e-176 622.9 458 66.8
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 2.0e-176 622.9 464 68.8
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 2.7e-176 622.5 458 67.5
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 2.7e-176 622.5 458 66.2
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 4.5e-176 621.7 466 66.7
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 1.3e-175 620.2 463 68.5
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 3.8e-175 618.6 463 67.8
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 3.8e-175 618.6 464 67.7
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 3.8e-175 618.6 429 72.3
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 3.8e-175 618.6 459 69.1
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 3.8e-175 618.6 463 67.0
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 5.0e-175 618.2 465 68.2
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.5e-175 617.8 476 66.0
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.1e-174 617.1 466 66.1
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 1.9e-174 616.3 464 67.5
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 1.9e-174 616.3 463 67.2
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 2.5e-174 615.9 464 67.2
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 2.1e-173 612.8 467 65.1
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.7e-173 612.5 467 64.7
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 2.7e-173 612.5 466 67.0
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 3.6e-173 612.1 464 67.0
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 4.7e-173 611.7 463 66.7
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 1.8e-172 609.8 465 67.5
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 5.2e-172 608.2 464 66.4
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 5.2e-172 608.2 460 68.9
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 6.8e-172 607.8 458 67.9
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 2.0e-171 606.3 462 65.4
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 3.4e-171 605.5 463 65.9
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 4.4e-171 605.1 459 67.5
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 4.4e-171 605.1 459 67.5
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 5.7e-171 604.7 461 66.6
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 7.5e-171 604.4 458 65.3
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 7.5e-171 604.4 476 65.8
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 4.8e-170 601.7 455 67.0
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 4.8e-170 601.7 461 65.7
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 1.8e-169 599.7 464 65.1
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 3.1e-169 599.0 461 65.3
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 1.2e-168 597.0 467 65.1
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 2.7e-168 595.9 505 61.0
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 7.7e-168 594.3 463 65.0
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 2.9e-167 592.4 462 64.7
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 2.9e-167 592.4 456 66.4
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 4.7e-165 585.1 463 62.9
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 1.0e-164 583.9 457 65.6
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 1.4e-164 583.6 459 63.4
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.0e-163 579.7 461 64.4
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 8.3e-162 574.3 461 63.8
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 1.8e-161 573.2 463 62.0
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 7.0e-161 571.2 457 63.2
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 1.6e-160 570.1 440 66.6
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 2.4e-153 546.2 406 66.3
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.6e-152 543.5 461 61.2
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 5.9e-152 541.6 400 65.8
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 3.3e-150 535.8 429 64.8
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 1.2e-149 533.9 414 65.7
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.0e-148 530.8 483 58.6
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 3.0e-143 512.7 462 59.5
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 6.6e-143 511.5 465 58.5
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 1.7e-138 496.9 477 57.7
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 3.0e-135 486.1 454 53.5
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 9.5e-134 481.1 464 54.7
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 3.8e-130 469.2 311 78.5
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 1.9e-121 440.3 339 66.1
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 2.1e-112 410.2 417 54.0
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 1.9e-110 403.7 298 69.5
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 5.3e-108 395.6 281 68.7
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 8.4e-98 361.7 306 59.2
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 5.5e-97 359.0 456 42.1
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.1e-95 352.4 333 58.6
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 6.5e-90 335.5 415 45.5
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 8.5e-90 335.1 346 54.9
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 2.5e-89 333.6 459 43.4
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 2.1e-88 330.5 459 46.4
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 7.4e-86 322.0 468 39.3
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 2.0e-83 313.9 383 47.5
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 8.8e-79 298.5 459 37.9
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 7.2e-73 278.9 297 52.5
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 2.7e-72 276.9 230 56.1
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 4.4e-70 269.6 245 61.6
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 6.5e-66 255.8 231 57.1
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 4.4e-62 243.0 259 49.8
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 3.4e-54 216.9 165 63.0
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 5.0e-50 203.0 169 60.4
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 1.7e-42 177.9 158 63.9
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 4.7e-40 169.9 122 67.2
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 4.7e-40 169.9 131 64.1
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 4.1e-36 156.8 132 59.8
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 1.3e-34 151.8 123 61.8
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 5.2e-31 139.8 127 53.5
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 8.6e-26 122.5 102 61.8
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 2.3e-18 97.8 107 50.5
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 3.0e-18 97.4 320 27.5
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 5.1e-18 96.7 84 54.8
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 1.2e-14 85.5 52 80.8
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 1.6e-11 75.1 63 58.7
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 1.1e-07 62.4 54 64.8


User provided reference genes

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