Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 1.4e-140 503.1 274 100.0
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 3.9e-135 485.0 270 94.4
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 8.8e-127 457.2 251 88.8
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 2.0e-126 456.1 250 89.2
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 2.6e-126 455.7 250 89.2
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.6e-126 455.7 250 89.2
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 3.3e-126 455.3 248 89.5
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 4.4e-126 454.9 250 88.8
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 7.4e-126 454.1 248 89.9
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 1.7e-125 453.0 248 88.7
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.2e-125 452.6 250 88.4
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 2.8e-125 452.2 248 88.3
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 3.7e-125 451.8 250 88.8
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 3.7e-125 451.8 250 87.6
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 4.8e-125 451.4 247 89.1
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 4.8e-125 451.4 247 89.1
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 4.8e-125 451.4 276 84.1
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 1.1e-124 450.3 247 89.5
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.4e-124 449.9 247 88.7
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 1.8e-124 449.5 248 87.9
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 1.8e-124 449.5 247 87.4
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 2.4e-124 449.1 248 88.3
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 2.4e-124 449.1 248 87.9
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 4.1e-124 448.4 248 87.1
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 5.3e-124 448.0 248 88.3
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 5.3e-124 448.0 273 86.1
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 5.3e-124 448.0 248 87.5
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 6.9e-124 447.6 250 85.6
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 6.9e-124 447.6 248 87.5
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 6.9e-124 447.6 249 88.0
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 6.9e-124 447.6 248 87.9
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 6.9e-124 447.6 271 85.6
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 9.1e-124 447.2 248 87.1
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 1.2e-123 446.8 247 87.4
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 2.0e-123 446.0 247 87.9
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 2.0e-123 446.0 247 87.4
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 2.0e-123 446.0 248 86.7
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 2.6e-123 445.7 248 87.9
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 2.6e-123 445.7 247 90.3
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 3.4e-123 445.3 247 86.2
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 4.5e-123 444.9 274 84.7
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 5.9e-123 444.5 247 87.0
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 5.9e-123 444.5 247 87.4
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 7.7e-123 444.1 249 86.7
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 1.3e-122 443.4 272 80.9
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 1.3e-122 443.4 246 87.4
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 1.3e-122 443.4 248 87.1
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 1.3e-122 443.4 240 90.0
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 1.7e-122 443.0 248 84.7
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.2e-122 442.6 247 86.2
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.2e-122 442.6 247 86.2
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 2.9e-122 442.2 247 87.0
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 2.9e-122 442.2 247 87.0
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 2.9e-122 442.2 248 85.9
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 3.8e-122 441.8 248 86.7
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 3.8e-122 441.8 258 84.9
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 3.8e-122 441.8 248 85.5
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 5.0e-122 441.4 247 85.8
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 5.0e-122 441.4 247 87.0
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 5.0e-122 441.4 247 86.6
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 5.0e-122 441.4 248 86.7
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 6.5e-122 441.0 248 85.9
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 6.5e-122 441.0 250 85.6
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 8.5e-122 440.7 248 86.7
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 1.1e-121 440.3 247 85.8
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 1.1e-121 440.3 247 85.8
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 1.1e-121 440.3 247 85.8
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 1.4e-121 439.9 247 86.2
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 1.9e-121 439.5 271 82.7
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 1.9e-121 439.5 247 87.4
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 2.5e-121 439.1 247 86.2
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 2.5e-121 439.1 248 85.5
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 2.5e-121 439.1 272 84.6
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 3.2e-121 438.7 248 87.1
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 4.2e-121 438.3 250 85.2
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 5.5e-121 438.0 247 86.2
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 7.2e-121 437.6 247 86.6
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 7.2e-121 437.6 248 86.7
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 9.4e-121 437.2 247 86.6
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 1.2e-120 436.8 248 85.1
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.2e-120 436.8 243 88.5
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.6e-120 436.4 249 85.5
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 2.7e-120 435.6 266 81.6
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 3.6e-120 435.3 248 84.3
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 3.6e-120 435.3 273 81.0
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 7.9e-120 434.1 248 85.5
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.0e-119 433.7 244 86.1
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 3.9e-119 431.8 247 85.0
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 2.0e-118 429.5 250 87.2
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 5.7e-118 427.9 248 83.1
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 7.4e-118 427.6 227 90.3
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 7.0e-116 421.0 249 81.9
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 8.0e-112 407.5 239 81.2
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 1.5e-110 403.3 244 80.7
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 1.3e-109 400.2 247 80.2
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 1.3e-109 400.2 247 80.2
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 2.8e-109 399.1 222 87.8
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 4.1e-108 395.2 344 63.1
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 1.2e-107 393.7 247 78.9
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 3.5e-107 392.1 259 77.2
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 1.6e-99 366.7 190 93.7
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 2.9e-98 362.5 216 83.8
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 2.3e-95 352.8 189 91.5
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 7.3e-89 331.3 168 97.6
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 2.8e-88 329.3 169 93.5
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 3.6e-88 328.9 169 93.5
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 1.0e-87 327.4 243 66.7
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 2.0e-86 323.2 179 89.4
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 1.6e-80 303.5 181 83.4
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 1.7e-77 293.5 185 77.3
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.0e-74 284.3 164 86.0
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.1e-73 280.8 164 83.5
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.1e-73 280.8 164 85.4
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.6e-72 276.9 161 83.9
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 8.1e-72 274.6 145 92.4
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 3.2e-68 262.7 145 89.0
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 5.4e-68 261.9 213 66.2
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 1.6e-67 260.4 153 85.0
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 1.0e-66 257.7 149 88.6
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 1.3e-66 257.3 153 84.3
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 1.9e-65 253.4 154 80.5
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.1e-63 246.1 174 73.6
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 1.4e-60 237.3 146 80.1
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 1.1e-52 211.1 139 76.3
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 1.4e-52 210.7 190 55.8
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.7e-51 206.5 151 70.9
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 2.8e-40 169.9 93 86.0
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 5.3e-39 165.6 165 56.4
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 1.8e-31 140.6 76 90.8
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 1.9e-28 130.6 129 56.6
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 1.0e-26 124.8 71 84.5
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 2.8e-24 116.7 93 62.4
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 1.1e-15 88.2 58 69.0
A04p26400 Brassica napus HOM05D005716 ORTHO05D099386 1.2e-14 84.7 44 84.1
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 3.6e-11 73.2 55 61.8
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 3.6e-11 73.2 55 61.8
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 2.0e-09 67.4 50 62.0


User provided reference genes

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