Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 0.0e+00 2142.1 1075 100.0
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 0.0e+00 2086.6 1079 97.6
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 4.9e-298 1028.1 1143 53.0
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 5.6e-278 961.4 1190 50.0
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 2.4e-273 946.0 1128 50.7
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.3e-255 887.1 1193 46.4
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 8.7e-255 884.4 1059 48.9
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 2.8e-253 879.4 1181 46.5
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 1.7e-250 870.2 1218 45.2
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 2.5e-249 866.3 1174 46.3
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.8e-244 850.1 1172 45.5
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 2.4e-244 849.7 1174 45.4
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 9.0e-244 847.8 1153 45.4
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 1.4e-241 840.5 1175 45.1
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.6e-240 837.0 1182 44.9
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.0e-239 832.8 1161 44.9
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 8.8e-239 831.2 1167 45.4
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 7.4e-238 828.2 1110 47.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.7e-237 827.0 1181 43.5
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 1.1e-236 824.3 1176 44.5
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 2.4e-236 823.2 1123 45.5
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.1e-236 822.8 1187 44.1
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.5e-235 820.5 1159 45.3
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.2e-233 812.8 1160 46.0
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.2e-232 810.8 1185 42.9
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 1.2e-232 810.8 1136 45.2
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.0e-231 807.7 1158 44.7
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-231 807.4 1229 43.0
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 5.3e-228 795.4 1203 43.5
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.9e-227 792.0 1228 42.5
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 7.2e-225 785.0 1124 44.1
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 9.4e-225 784.6 1168 44.7
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-223 780.8 949 47.5
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.8e-223 780.4 891 50.2
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 6.7e-223 778.5 1165 43.7
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.3e-221 774.2 1081 45.4
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 3.7e-221 772.7 1146 44.8
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 1.2e-219 767.7 1131 44.6
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 4.2e-217 759.2 1169 42.3
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 3.1e-212 743.0 1089 43.3
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 5.4e-212 742.3 1105 42.4
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 3.8e-210 736.1 1073 43.2
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 7.2e-209 731.9 1119 42.3
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.8e-207 727.2 1118 42.2
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 8.8e-207 724.9 1149 42.8
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.5e-206 724.2 1070 43.5
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 2.6e-206 723.4 1152 41.8
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.8e-205 719.9 560 63.9
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 6.3e-205 718.8 1145 40.7
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 1.8e-204 717.2 899 47.2
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.5e-201 707.6 1108 42.1
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.2e-200 704.5 1087 42.3
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 2.8e-200 703.4 1137 41.0
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 4.7e-200 702.6 1087 43.3
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.4e-199 701.0 1088 42.4
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 2.0e-198 697.2 1103 42.8
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 1.3e-197 694.5 1053 42.1
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 1.7e-197 694.1 1113 42.0
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 1.7e-197 694.1 1137 40.5
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.9e-197 693.3 1086 41.7
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 8.3e-197 691.8 1080 40.9
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 1.1e-196 691.4 1066 42.0
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 1.8e-196 690.6 1088 42.2
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.8e-196 690.6 1148 40.1
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.8e-196 690.6 1123 41.3
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 3.2e-196 689.9 1111 41.8
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 3.2e-196 689.9 939 44.4
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 4.1e-196 689.5 1060 41.8
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.0e-194 684.9 1075 41.9
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.1e-193 681.4 1168 40.2
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 2.1e-192 677.2 1072 41.9
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 2.1e-192 677.2 1089 42.9
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 6.2e-192 675.6 1123 41.8
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.4e-191 674.5 1022 42.8
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 5.2e-191 672.5 1045 42.3
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 2.0e-190 670.6 1067 41.6
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 4.4e-190 669.5 1157 39.9
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 3.7e-189 666.4 1060 42.1
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.4e-188 664.5 1004 41.1
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 2.4e-188 663.7 565 58.9
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.7e-186 657.5 1162 39.7
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 5.6e-185 652.5 1182 38.2
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 2.8e-184 650.2 1061 41.3
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.1e-183 648.3 1026 40.4
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.3e-183 647.1 1033 40.9
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 4.0e-183 646.4 1088 40.9
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 5.2e-183 646.0 1087 40.8
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 2.6e-182 643.7 797 48.1
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.6e-182 643.7 994 41.1
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 3.4e-182 643.3 961 41.3
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 7.5e-182 642.1 900 43.6
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 9.8e-182 641.7 576 55.6
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.2e-181 640.6 1081 39.2
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 4.9e-181 639.4 986 42.0
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.9e-180 637.5 808 49.3
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 2.5e-177 627.1 1026 42.8
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 4.4e-174 616.3 1106 38.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.3e-170 604.0 1164 38.3
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 4.3e-161 573.2 900 40.2
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.1e-159 568.5 955 40.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.6e-139 501.5 459 56.4
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.9e-130 470.3 517 51.3
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 3.7e-128 463.8 917 36.6
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.0e-122 444.1 905 37.9
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 8.8e-122 442.6 314 67.2
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 7.4e-121 439.5 498 44.8
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 8.2e-120 436.0 513 45.8
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.7e-117 428.3 732 36.6
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.7e-117 428.3 460 50.0
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.9e-117 427.6 1152 32.3
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.1e-116 425.6 538 45.2
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 1.1e-113 415.6 555 41.4
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 1.5e-105 388.7 877 34.9
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.3e-82 311.6 743 36.6
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 4.0e-74 284.3 232 61.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 3.7e-72 277.7 690 35.7
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.8e-66 258.8 224 57.1
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 6.8e-58 230.3 722 31.7
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 8.4e-32 143.7 289 33.9
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 3.4e-25 121.7 592 29.1
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.3e-19 103.2 85 56.5
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 2.8e-19 102.1 187 36.9
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 5.9e-17 94.4 158 41.8
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 2.1e-14 85.9 482 26.8
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 2.3e-13 82.4 61 57.4
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 3.0e-13 82.0 100 45.0
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 6.7e-13 80.9 68 55.9
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 8.8e-13 80.5 51 66.7
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 8.8e-13 80.5 51 66.7
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.9e-12 79.3 171 35.7
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 9.7e-12 77.0 79 46.8
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.6e-06 59.7 34 73.5
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.6e-06 58.5 92 44.6


User provided reference genes

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