Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 1.4e-100 369.8 206 100.0
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 5.1e-95 351.3 206 96.1
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 5.4e-28 128.6 198 39.9
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 7.0e-28 128.3 186 41.9
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 7.0e-28 128.3 181 43.6
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 1.6e-27 127.1 179 40.8
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.5e-27 125.6 186 41.4
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 7.8e-27 124.8 179 43.0
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 2.3e-26 123.2 181 43.1
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 5.0e-26 122.1 185 39.5
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 5.0e-26 122.1 189 42.3
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 2.5e-25 119.8 181 42.0
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 2.5e-25 119.8 181 40.9
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 9.5e-25 117.9 187 39.0
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.2e-24 117.5 186 39.8
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 2.1e-24 116.7 184 41.8
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.4e-23 114.0 179 44.7
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.3e-23 113.2 187 40.1
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 4.0e-23 112.5 185 38.4
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 6.8e-23 111.7 177 41.2
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 1.2e-22 110.9 179 36.9
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.2e-22 110.9 180 37.8
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 2.0e-22 110.2 184 40.2
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 2.0e-22 110.2 178 41.0
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 3.4e-22 109.4 196 43.4
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 3.4e-22 109.4 177 40.1
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 4.4e-22 109.0 181 35.9
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 5.8e-22 108.6 183 47.5
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 5.8e-22 108.6 174 39.1
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 5.8e-22 108.6 187 36.4
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 7.5e-22 108.2 187 39.0
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 7.5e-22 108.2 198 37.4
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 9.8e-22 107.8 190 34.7
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 9.8e-22 107.8 189 38.6
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.3e-21 107.5 191 41.4
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 1.3e-21 107.5 187 35.3
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.7e-21 107.1 187 38.0
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 1.7e-21 107.1 187 40.1
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 1.7e-21 107.1 175 43.4
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.7e-21 107.1 184 40.2
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.2e-21 106.7 183 44.8
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 4.9e-21 105.5 184 46.7
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 4.9e-21 105.5 177 39.5
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 6.4e-21 105.1 181 42.5
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 6.4e-21 105.1 186 38.2
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 8.3e-21 104.8 191 40.3
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 8.3e-21 104.8 180 46.7
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 8.3e-21 104.8 189 40.2
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 1.4e-20 104.0 180 37.2
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 9.2e-20 101.3 182 37.9
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 2.0e-19 100.1 188 38.3
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 2.7e-19 99.8 183 35.0
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 3.5e-19 99.4 189 34.4
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 3.5e-19 99.4 183 36.1
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 3.5e-19 99.4 176 37.5
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 4.6e-19 99.0 184 35.3
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 4.6e-19 99.0 184 36.4
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 4.6e-19 99.0 186 37.6
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 6.0e-19 98.6 179 39.1
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 6.0e-19 98.6 177 39.0
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 7.8e-19 98.2 193 31.6
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 7.8e-19 98.2 192 40.1
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.0e-18 97.8 192 39.6
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.0e-18 97.8 192 40.1
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.0e-18 97.8 178 36.5
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 2.3e-18 96.7 177 34.5
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 3.0e-18 96.3 186 35.5
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 3.9e-18 95.9 181 41.4
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 3.9e-18 95.9 177 35.0
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 5.0e-18 95.5 183 35.5
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 8.6e-18 94.7 182 38.5
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 8.6e-18 94.7 176 37.5
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.1e-17 94.4 182 34.6
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.1e-17 94.4 187 29.4
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 1.5e-17 94.0 140 40.0
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.9e-17 93.6 187 37.4
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 1.9e-17 93.6 179 40.8
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 2.5e-17 93.2 196 32.7
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 2.5e-17 93.2 182 36.3
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 2.5e-17 93.2 182 37.9
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 3.3e-17 92.8 185 34.1
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 4.3e-17 92.4 188 36.7
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 5.6e-17 92.0 179 34.6
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 5.6e-17 92.0 172 36.0
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 7.3e-17 91.7 182 36.3
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 9.5e-17 91.3 182 36.8
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 9.5e-17 91.3 184 38.0
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 3.6e-16 89.4 133 39.1
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 4.7e-16 89.0 215 34.4
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 6.2e-16 88.6 177 37.3
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 8.0e-16 88.2 178 32.0
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.1e-15 87.8 187 29.9
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.1e-15 87.8 187 33.7
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.4e-15 87.4 186 30.1
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.4e-15 87.4 182 33.5
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 1.4e-15 87.4 187 32.6
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 1.4e-15 87.4 187 32.6
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.8e-15 87.0 178 32.6
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 2.3e-15 86.7 183 33.3
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 2.3e-15 86.7 183 33.3
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 2.3e-15 86.7 178 36.0
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 5.2e-15 85.5 174 31.0
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 6.8e-15 85.1 182 33.5
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 6.8e-15 85.1 180 33.9
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 8.9e-15 84.7 182 33.0
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 1.2e-14 84.3 192 31.8
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.5e-14 84.0 179 31.8
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.6e-14 83.2 178 34.3
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 4.4e-14 82.4 179 31.8
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 4.4e-14 82.4 185 37.3
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 5.8e-14 82.0 166 35.5
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 7.5e-14 81.6 180 32.2
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 7.5e-14 81.6 180 32.2
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 7.5e-14 81.6 177 31.6
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 9.8e-14 81.3 176 35.2
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 1.3e-13 80.9 179 38.0
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.1e-12 77.8 184 32.1
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 4.1e-12 75.9 204 28.9
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.2e-11 74.3 220 28.2
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 3.5e-11 72.8 167 31.7
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 9.5e-09 64.7 83 43.4
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.1e-08 63.5 50 60.0
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.1e-08 63.5 190 36.3
MBI07_g39476_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 6.2e-08 62.0 60 48.3
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 6.8e-07 58.5 58 50.0
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-06 57.8 49 57.1
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.5e-06 57.4 49 57.1


User provided reference genes

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