Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 1.1e-198 696.4 360 100.0
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 5.2e-196 687.6 360 98.9
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 3.3e-158 562.0 328 89.6
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 7.2e-153 544.3 357 78.2
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 7.2e-153 544.3 357 78.2
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 3.7e-149 531.9 353 77.6
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 4.1e-148 528.5 359 76.0
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 2.0e-147 526.2 357 74.8
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 2.6e-147 525.8 357 75.1
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 2.9e-146 522.3 346 76.0
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 2.9e-146 522.3 351 76.9
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 1.4e-145 520.0 344 76.5
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 3.2e-145 518.8 337 77.2
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 4.2e-145 518.5 351 76.4
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 1.2e-144 516.9 354 74.3
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 1.2e-144 516.9 357 74.2
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 1.6e-144 516.5 348 75.6
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 2.1e-144 516.2 352 74.4
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 2.7e-144 515.8 347 75.8
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 3.6e-144 515.4 327 78.9
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 3.6e-144 515.4 366 72.1
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 3.6e-144 515.4 349 75.1
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 4.7e-144 515.0 349 74.8
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 7.9e-144 514.2 333 77.5
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 1.0e-143 513.8 334 76.9
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 1.8e-143 513.1 351 73.2
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 2.3e-143 512.7 349 75.4
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 2.3e-143 512.7 352 75.9
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 3.0e-143 512.3 364 72.5
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 3.9e-143 511.9 346 75.1
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 3.9e-143 511.9 348 75.6
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 5.1e-143 511.5 323 79.3
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 6.7e-143 511.1 323 78.9
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 1.1e-142 510.4 352 75.6
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 1.1e-142 510.4 365 72.9
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 3.3e-142 508.8 351 74.4
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 4.4e-142 508.4 359 74.7
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 4.4e-142 508.4 342 74.9
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 5.7e-142 508.1 348 73.9
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 5.7e-142 508.1 376 70.2
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 7.4e-142 507.7 317 79.8
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 9.7e-142 507.3 362 73.2
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 1.3e-141 506.9 325 77.8
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 1.3e-141 506.9 334 75.1
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 1.7e-141 506.5 360 72.5
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 2.2e-141 506.1 360 72.8
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 2.2e-141 506.1 360 72.8
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 2.2e-141 506.1 360 72.8
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 2.2e-141 506.1 327 77.4
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 4.8e-141 505.0 324 77.8
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 6.3e-141 504.6 317 80.1
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 8.2e-141 504.2 355 72.7
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 8.2e-141 504.2 351 75.5
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 1.1e-140 503.8 355 72.7
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 1.1e-140 503.8 315 80.0
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 3.1e-140 502.3 331 76.1
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 3.1e-140 502.3 331 76.1
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 4.1e-140 501.9 348 73.0
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 7.0e-140 501.1 348 72.7
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 7.0e-140 501.1 315 78.7
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 1.2e-139 500.4 354 73.2
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 1.2e-139 500.4 355 72.4
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 1.5e-139 500.0 376 69.9
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 2.0e-139 499.6 330 75.2
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 2.6e-139 499.2 347 74.1
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 3.5e-139 498.8 327 75.2
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 4.5e-139 498.4 346 72.5
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 7.7e-139 497.7 329 75.4
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 1.0e-138 497.3 331 77.0
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 1.0e-138 497.3 330 77.6
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 1.3e-138 496.9 348 72.7
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 2.2e-138 496.1 346 74.9
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 2.9e-138 495.7 293 82.6
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 2.9e-138 495.7 347 73.2
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 2.9e-138 495.7 348 71.8
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 2.9e-138 495.7 348 71.8
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 2.9e-138 495.7 348 71.8
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 2.9e-138 495.7 347 72.9
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 5.0e-138 495.0 344 71.5
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 1.5e-137 493.4 345 72.5
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 4.2e-137 491.9 312 78.2
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 2.1e-136 489.6 352 70.2
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 2.7e-136 489.2 357 71.4
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 1.4e-135 486.9 318 75.5
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 3.0e-135 485.7 322 76.4
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 3.9e-135 485.3 350 72.0
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 1.1e-134 483.8 353 69.1
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 3.3e-134 482.3 353 70.3
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 7.4e-134 481.1 308 76.0
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 1.7e-133 479.9 329 74.8
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 4.8e-133 478.4 349 70.2
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 1.8e-132 476.5 292 80.5
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 1.8e-132 476.5 352 70.7
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 3.1e-132 475.7 376 68.9
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 4.1e-132 475.3 311 76.5
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 7.0e-132 474.6 339 74.0
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 5.9e-131 471.5 361 66.8
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.0e-130 470.7 349 69.3
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 1.7e-130 469.9 351 68.9
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 1.5e-129 466.8 330 74.5
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 7.2e-129 464.5 346 69.9
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 1.2e-128 463.8 296 76.0
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 2.7e-128 462.6 353 66.0
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 3.0e-127 459.1 346 69.7
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 1.3e-125 453.8 352 69.3
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 8.3e-125 451.1 308 72.7
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 3.5e-123 445.7 311 72.3
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 3.5e-123 445.7 338 69.2
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 5.9e-123 444.9 354 64.7
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 6.5e-122 441.4 327 65.7
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 1.5e-121 440.3 310 71.6
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 9.4e-121 437.6 346 63.3
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 1.0e-119 434.1 373 64.6
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 6.8e-119 431.4 265 82.3
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 2.0e-118 429.9 302 73.8
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 4.9e-117 425.2 364 62.6
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 7.0e-116 421.4 301 71.8
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 2.0e-115 419.9 357 63.9
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.5e-113 412.9 348 62.6
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.5e-113 412.9 348 62.6
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 8.0e-112 407.9 315 68.3
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 4.4e-110 402.1 356 61.8
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 7.5e-110 401.4 246 80.9
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 5.4e-108 395.2 335 64.5
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 1.6e-107 393.7 294 70.1
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 3.3e-105 386.0 239 81.6
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 4.4e-102 375.6 313 61.0
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 4.9e-101 372.1 245 74.7
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.1e-97 360.9 243 74.1
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 1.5e-97 360.5 295 63.4
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 5.6e-89 332.0 222 73.9
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 1.2e-88 330.9 357 54.9
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 1.6e-88 330.5 224 74.6
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.4e-84 317.4 225 70.2
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 2.3e-82 310.1 228 71.5
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.5e-73 280.8 197 73.6
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 4.2e-68 262.7 262 56.9
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 8.1e-64 248.4 186 69.9
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.2e-59 234.6 178 68.5
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 3.7e-56 223.0 167 69.5
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.1e-41 174.9 130 69.2
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 7.4e-41 172.2 130 68.5
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.2e-38 164.9 121 70.2
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.9e-36 157.5 114 68.4
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 1.2e-30 138.3 83 77.1
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 1.2e-30 138.3 117 64.1
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.3e-29 134.8 129 58.9
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 8.5e-29 132.1 295 29.8
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.4e-28 131.3 97 66.0
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.6e-27 127.9 118 61.9
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 1.0e-26 125.2 144 50.7
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 5.9e-22 109.4 88 63.6
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.7e-21 107.8 86 61.6
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 1.5e-20 104.8 99 61.6
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 4.7e-19 99.8 74 60.8
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 5.7e-17 92.8 79 64.6
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 3.7e-16 90.1 52 71.2
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 3.8e-13 80.1 52 65.4
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 1.8e-10 71.2 73 54.8


User provided reference genes

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