Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 5.2e-279 963.8 494 100.0
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 6.4e-269 930.2 494 96.2
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 9.2e-143 511.1 320 82.5
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 5.1e-141 505.4 501 54.5
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 5.6e-140 501.9 501 54.5
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 2.1e-139 500.0 499 54.3
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 1.1e-138 497.7 498 54.0
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 2.4e-135 486.5 499 55.1
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 3.5e-134 482.6 489 52.8
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 2.3e-133 479.9 497 51.3
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.3e-133 479.9 497 51.5
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 3.0e-133 479.6 496 52.8
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 8.7e-133 478.0 489 52.4
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 1.5e-132 477.2 497 51.9
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 4.3e-132 475.7 497 52.5
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 9.6e-132 474.6 496 52.4
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 1.2e-131 474.2 496 52.0
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.8e-131 473.0 487 51.1
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 3.6e-131 472.6 489 51.7
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.7e-131 472.2 487 51.1
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 6.2e-131 471.9 486 52.9
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 1.4e-130 470.7 489 51.5
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.8e-130 470.3 497 50.5
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 1.8e-130 470.3 501 51.5
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 4.0e-130 469.2 498 50.8
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 4.4e-129 465.7 479 52.6
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 4.4e-129 465.7 500 51.2
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 9.9e-129 464.5 489 48.7
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 1.1e-127 461.1 478 52.1
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 4.2e-127 459.1 482 52.1
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.2e-127 459.1 497 49.5
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 9.3e-127 458.0 497 49.7
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 9.3e-127 458.0 489 50.1
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 2.7e-126 456.4 495 49.5
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 3.5e-126 456.1 497 49.5
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 4.6e-126 455.7 493 51.3
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 7.8e-126 454.9 497 51.3
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 7.8e-126 454.9 473 49.9
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 1.7e-125 453.8 484 50.0
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 2.3e-125 453.4 486 51.2
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 2.3e-125 453.4 489 49.9
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 2.3e-125 453.4 483 50.1
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 5.1e-125 452.2 495 48.5
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 6.6e-125 451.8 498 49.4
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 8.7e-125 451.4 498 50.0
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 1.1e-124 451.1 497 50.1
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 1.9e-124 450.3 489 49.1
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 2.5e-124 449.9 496 49.0
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 2.5e-124 449.9 485 49.5
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 3.3e-124 449.5 489 49.3
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 9.6e-124 448.0 496 49.4
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 2.1e-123 446.8 500 48.8
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 2.1e-123 446.8 485 49.3
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 2.1e-123 446.8 499 49.7
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 4.8e-123 445.7 487 50.5
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 6.2e-123 445.3 500 48.4
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 4.0e-122 442.6 478 50.0
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 5.3e-122 442.2 498 48.4
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 2.6e-121 439.9 488 49.6
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 2.6e-121 439.9 485 48.5
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 3.4e-121 439.5 493 51.1
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 7.6e-121 438.3 499 47.9
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.3e-120 437.6 485 48.7
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 1.3e-120 437.6 501 48.3
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 1.7e-120 437.2 493 48.7
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 1.7e-120 437.2 495 49.5
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 8.4e-120 434.9 488 47.1
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 1.4e-119 434.1 488 47.3
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 1.4e-119 434.1 488 47.3
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 2.4e-119 433.3 472 48.9
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 2.4e-119 433.3 498 49.2
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 7.1e-119 431.8 485 48.2
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 7.1e-119 431.8 535 46.5
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 7.9e-118 428.3 486 48.4
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 1.3e-117 427.6 483 49.9
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 3.0e-117 426.4 487 48.5
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 1.1e-116 424.5 487 47.8
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 2.5e-116 423.3 490 48.2
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 3.3e-116 422.9 486 46.9
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 3.3e-116 422.9 487 47.4
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 5.6e-116 422.2 487 48.0
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 9.6e-116 421.4 499 47.3
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 2.1e-115 420.2 483 48.9
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 4.8e-115 419.1 370 57.6
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 8.1e-115 418.3 486 47.9
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.1e-114 417.9 497 46.7
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 1.4e-114 417.5 486 47.3
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 3.1e-114 416.4 484 47.5
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 4.0e-114 416.0 485 47.0
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 4.5e-113 412.5 482 47.7
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 9.9e-113 411.4 497 46.3
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 3.8e-112 409.5 483 46.8
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 3.8e-112 409.5 497 46.7
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 8.4e-112 408.3 482 47.3
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 5.5e-111 405.6 482 47.5
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 2.3e-109 400.2 488 46.3
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 5.1e-109 399.1 490 46.1
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 8.7e-109 398.3 483 46.2
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 7.4e-108 395.2 486 46.3
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 1.6e-107 394.0 498 45.8
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 2.8e-107 393.3 418 51.2
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 4.8e-107 392.5 485 44.5
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 2.6e-105 386.7 485 44.9
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 8.4e-104 381.7 502 42.8
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 4.2e-103 379.4 489 45.8
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 1.6e-99 367.5 488 43.9
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 3.7e-99 366.3 373 50.4
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 1.1e-98 364.8 466 45.5
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 9.0e-98 361.7 375 51.2
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 1.3e-96 357.8 182 98.4
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 6.5e-96 355.5 531 37.5
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 8.2e-91 338.6 483 41.6
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 1.1e-90 338.2 470 43.8
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 2.2e-88 330.5 473 44.0
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 2.1e-86 323.9 432 42.8
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 6.7e-85 318.9 494 42.3
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 4.1e-82 309.7 407 44.7
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 6.5e-80 302.4 490 41.2
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 1.1e-79 301.6 326 48.5
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 4.2e-79 299.7 285 53.7
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 1.0e-77 295.0 286 53.1
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 5.2e-77 292.7 374 43.3
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 4.4e-76 289.7 285 53.0
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 2.2e-75 287.3 503 35.0
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 2.8e-75 287.0 409 40.8
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 2.9e-72 276.9 255 54.5
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 6.1e-70 269.2 141 95.7
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 6.7e-69 265.8 134 98.5
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.8e-67 259.6 496 35.7
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.4e-66 258.1 444 36.3
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 1.0e-64 251.9 377 42.4
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 1.5e-63 248.1 500 36.6
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 3.2e-63 246.9 537 32.6
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 9.1e-58 228.8 482 32.8
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 2.0e-57 227.6 601 30.6
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 3.5e-57 226.9 417 35.0
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 3.3e-55 220.3 291 41.9
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 4.2e-55 219.9 474 34.0
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 6.1e-54 216.1 254 47.6
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 8.0e-54 215.7 183 61.7
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 7.5e-52 209.1 355 36.6
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 8.3e-51 205.7 376 35.1
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 7.0e-50 202.6 253 45.8
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 7.0e-50 202.6 158 61.4
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.3e-48 198.4 435 30.8
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.1e-47 195.3 371 35.3
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 3.1e-45 187.2 252 42.1
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 4.1e-42 176.8 171 56.1
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 3.0e-40 170.6 243 42.0
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.1e-39 168.7 273 39.6
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 1.5e-39 168.3 536 26.9
Peaxi162Scf00153g01322 Petunia axillaris HOM05D001952 ORTHO05D004913 6.2e-38 162.9 253 40.3
TPR.G23686 Trifolium pratense HOM05D001952 ORTHO05D012360 1.2e-36 158.7 452 29.4
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 4.4e-36 156.8 194 43.3
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 7.3e-31 139.4 267 34.8
Oeu061480.1 Olea europaea HOM05D001952 ORTHO05D004913 2.2e-27 127.9 477 26.6
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 1.9e-26 124.8 136 50.7
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 4.6e-25 120.2 149 44.3
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 2.3e-24 117.9 124 48.4
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.0e-24 117.5 96 61.5
Sopen04g024480 Solanum pennellii HOM05D001952 ORTHO05D004913 8.6e-24 115.9 94 58.5
Nitab4.5_0001040g0030 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.5e-23 115.2 131 49.6
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 6.2e-22 109.8 116 50.0
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 1.1e-21 109.0 147 41.5
Cre08.g374300 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D004913 6.2e-14 83.2 103 40.8
Duzib268G0813 Durio zibethinus HOM05D001952 ORTHO05D004913 1.8e-13 81.6 115 38.3
PSO013G0258 Papaver somniferum HOM05D000007 ORTHO05D000676 3.8e-11 73.9 67 62.7
arahy.Tifrunner.gnm1.ann1.6B0T5V Arachis hypogaea HOM05D001952 ORTHO05D004913 3.2e-10 70.9 150 30.7
MCO07G121 Micromonas commoda HOM05D001952 ORTHO05D004913 3.5e-09 67.4 106 28.3
Sabra14G0053500 Salix brachista HOM05D001952 ORTHO05D004913 6.6e-08 63.2 246 25.2
FAN03G1970 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.5e-07 61.2 73 46.6


User provided reference genes

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