Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 1.0e-41 173.7 89 100.0
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 1.5e-37 159.8 89 94.4
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 1.4e-14 83.6 82 57.3
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 1.4e-14 83.6 73 61.6
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.8e-14 83.2 83 56.6
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 2.4e-14 82.8 83 56.6
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 4.1e-14 82.0 82 52.4
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 2.6e-13 79.3 89 50.6
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 2.2e-12 76.3 79 50.6
PSO063G2671 Papaver somniferum HOM05D000509 ORTHO05D006393 3.8e-12 75.5 83 59.0
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 5.0e-12 75.1 79 48.1
PSO339G4277 Papaver somniferum HOM05D000509 ORTHO05D006393 5.0e-12 75.1 90 54.4
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 6.5e-12 74.7 87 46.0
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 8.5e-12 74.3 79 50.6
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.9e-11 73.2 84 50.0
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 2.5e-11 72.8 84 50.0
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 3.2e-11 72.4 79 51.9
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 4.2e-11 72.0 80 47.5
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 7.2e-11 71.2 83 49.4
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 7.2e-11 71.2 73 49.3
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 7.2e-11 71.2 89 47.2
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 7.2e-11 71.2 74 54.1
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 1.2e-10 70.5 89 44.9
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.2e-10 70.5 74 51.4
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 1.2e-10 70.5 86 47.7
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.2e-10 70.5 89 47.2
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.2e-10 70.5 89 47.2
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 1.6e-10 70.1 74 48.6
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 1.6e-10 70.1 80 46.2
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.6e-10 70.1 85 48.2
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 1.6e-10 70.1 79 48.1
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 4.6e-10 68.6 79 46.8
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 4.6e-10 68.6 79 49.4
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 6.1e-10 68.2 89 44.9
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 6.1e-10 68.2 72 54.2
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 7.9e-10 67.8 83 47.0
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 7.9e-10 67.8 79 48.1
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 7.9e-10 67.8 81 46.9
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 1.4e-09 67.0 88 44.3
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 1.4e-09 67.0 91 49.5
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.4e-09 67.0 80 47.5
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 1.8e-09 66.6 74 45.9
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 1.8e-09 66.6 82 48.8
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 1.8e-09 66.6 80 46.2
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 2.3e-09 66.2 83 47.0
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.3e-09 66.2 81 46.9
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 3.0e-09 65.9 74 48.6
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 3.0e-09 65.9 78 50.0
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 3.0e-09 65.9 91 45.1
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 3.0e-09 65.9 91 45.1
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 3.0e-09 65.9 91 45.1
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 3.0e-09 65.9 91 45.1
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 3.0e-09 65.9 75 48.0
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 3.0e-09 65.9 73 47.9
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 5.1e-09 65.1 81 44.4
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 5.1e-09 65.1 81 44.4
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 5.1e-09 65.1 88 43.2
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 5.1e-09 65.1 87 44.8
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 6.7e-09 64.7 81 45.7
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 6.7e-09 64.7 89 44.9
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 6.7e-09 64.7 89 44.9
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 6.7e-09 64.7 80 45.0
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 8.8e-09 64.3 89 43.8
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.5e-08 63.5 62 56.5
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 1.5e-08 63.5 89 44.9
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 2.0e-08 63.2 89 43.8
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 2.0e-08 63.2 81 43.2
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 2.0e-08 63.2 81 43.2
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 2.0e-08 63.2 84 41.7
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 2.5e-08 62.8 74 47.3
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 2.5e-08 62.8 83 44.6
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 2.5e-08 62.8 87 42.5
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 2.5e-08 62.8 88 44.3
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 2.5e-08 62.8 62 54.8
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 4.3e-08 62.0 82 41.5
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 4.3e-08 62.0 82 46.3
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 4.3e-08 62.0 85 45.9
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 4.3e-08 62.0 85 48.2
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 5.7e-08 61.6 74 47.3
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 7.4e-08 61.2 83 43.4
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 9.7e-08 60.8 89 43.8
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 9.7e-08 60.8 80 43.8
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 1.3e-07 60.5 83 44.6
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 1.3e-07 60.5 83 44.6
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 1.3e-07 60.5 91 44.0
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 1.7e-07 60.1 76 44.7
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 1.7e-07 60.1 83 45.8
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 2.2e-07 59.7 74 44.6
AL1G53560 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 2.2e-07 59.7 73 49.3
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.2e-07 59.7 90 41.1
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 2.2e-07 59.7 62 50.0
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 2.8e-07 59.3 80 45.0
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 3.7e-07 58.9 83 42.2
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 4.8e-07 58.5 83 42.2
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 4.8e-07 58.5 83 42.2
AL5G43630 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 8.2e-07 57.8 73 47.9
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 8.2e-07 57.8 62 50.0
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 8.2e-07 57.8 79 43.0
Carub.0005s2804 Capsella rubella HOM05D000509 ORTHO05D006393 1.4e-06 57.0 73 50.7
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 1.8e-06 56.6 79 43.0
BcaC07g40634 Brassica carinata HOM05D000509 ORTHO05D006393 2.4e-06 56.2 66 48.5
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 3.1e-06 55.8 89 40.4
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 3.1e-06 55.8 79 41.8
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 3.1e-06 55.8 90 41.1
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 3.1e-06 55.8 62 46.8
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 4.1e-06 55.5 82 37.8
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 9.1e-06 54.3 73 43.8
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 9.1e-06 54.3 62 46.8


User provided reference genes

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