Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 5.7e-178 627.5 317 100.0
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 3.8e-174 614.8 312 99.7
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 1.8e-168 595.9 312 97.1
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 8.0e-140 500.7 331 76.4
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 3.7e-137 491.9 326 76.1
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 1.8e-136 489.6 331 75.5
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 7.0e-136 487.6 327 74.9
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 2.3e-134 482.6 312 77.2
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 3.8e-134 481.9 325 74.8
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 8.6e-134 480.7 326 73.9
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 1.5e-133 479.9 326 74.2
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.9e-133 479.6 311 76.8
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 1.2e-132 476.9 311 76.2
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 2.1e-132 476.1 327 73.7
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 8.0e-132 474.2 343 70.8
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 1.4e-131 473.4 324 73.8
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.4e-131 473.4 311 75.6
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.8e-131 473.0 320 74.7
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 5.2e-131 471.5 329 71.7
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 6.8e-131 471.1 324 72.5
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 8.9e-131 470.7 327 71.9
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 8.9e-131 470.7 326 72.7
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 2.6e-130 469.2 326 73.0
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 7.5e-130 467.6 312 75.0
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 1.3e-129 466.8 327 71.3
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 2.2e-129 466.1 327 70.3
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 2.9e-129 465.7 315 74.9
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 2.9e-129 465.7 330 71.2
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 4.9e-129 464.9 310 76.8
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 4.9e-129 464.9 327 71.3
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 6.4e-129 464.5 319 73.7
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 6.4e-129 464.5 319 74.0
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 1.4e-128 463.4 324 72.8
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 1.4e-128 463.4 321 73.2
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 1.4e-128 463.4 323 72.4
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 3.2e-128 462.2 311 75.9
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 4.1e-128 461.8 327 70.0
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 4.1e-128 461.8 326 69.9
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 5.4e-128 461.5 314 73.2
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 5.4e-128 461.5 353 67.4
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 5.9e-127 458.0 327 70.6
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.9e-127 458.0 306 76.1
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 1.0e-126 457.2 321 71.3
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 2.3e-126 456.1 321 71.0
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.3e-126 456.1 317 72.6
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 6.6e-126 454.5 317 72.2
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 6.6e-126 454.5 319 71.8
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 8.6e-126 454.1 327 70.3
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 1.1e-125 453.8 327 69.7
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 1.1e-125 453.8 319 69.6
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.2e-124 450.3 320 72.2
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 1.6e-124 449.9 324 69.4
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 3.6e-124 448.7 325 69.5
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 4.7e-124 448.4 319 70.5
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 8.0e-124 447.6 325 69.2
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 2.6e-122 442.6 334 68.0
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 3.4e-122 442.2 326 67.8
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 3.4e-122 442.2 307 72.6
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 3.7e-121 438.7 311 69.8
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 4.9e-121 438.3 326 67.2
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 8.3e-121 437.6 332 65.4
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 5.4e-120 434.9 318 68.9
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 7.0e-120 434.5 318 68.6
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 1.6e-119 433.3 319 69.3
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.6e-119 433.3 318 68.9
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 3.5e-119 432.2 318 68.2
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 3.5e-119 432.2 318 68.2
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 4.6e-119 431.8 317 67.8
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 1.7e-118 429.9 318 67.9
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 3.9e-118 428.7 320 69.1
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 5.0e-118 428.3 342 64.6
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 6.6e-118 427.9 318 68.6
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 8.6e-118 427.6 324 66.4
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 1.1e-117 427.2 320 68.8
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 1.1e-117 427.2 320 68.8
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 5.6e-117 424.9 320 68.8
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 2.8e-116 422.5 324 65.1
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 6.2e-116 421.4 292 71.9
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 8.9e-115 417.5 316 68.4
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 2.0e-114 416.4 337 61.1
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 5.4e-112 408.3 301 67.8
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 1.2e-111 407.1 305 67.9
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.0e-110 404.1 278 73.0
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 9.5e-109 397.5 307 67.8
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.8e-108 396.0 312 62.8
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 1.2e-106 390.6 266 74.4
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 3.4e-106 389.0 281 69.8
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 1.7e-105 386.7 327 61.2
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 8.4e-105 384.4 319 60.5
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 1.6e-103 380.2 319 60.8
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 1.1e-101 374.0 240 77.9
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 1.1e-99 367.5 271 68.6
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.5e-98 363.6 316 61.4
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 7.6e-98 361.3 316 60.8
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 1.2e-95 354.0 261 66.7
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.8e-92 342.8 241 72.6
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 1.8e-91 340.1 361 54.6
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 9.0e-91 337.8 288 63.2
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 3.8e-89 332.4 251 68.1
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 7.1e-88 328.2 330 57.3
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 7.1e-88 328.2 252 66.7
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 4.6e-87 325.5 272 62.1
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 2.3e-86 323.2 331 51.7
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 3.9e-86 322.4 317 51.1
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 1.2e-82 310.8 234 65.8
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 5.8e-82 308.5 334 48.5
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 7.9e-79 298.1 216 68.5
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 2.6e-58 229.9 279 50.5
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.9e-56 223.8 316 43.0
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 3.6e-55 219.5 228 50.0
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 3.7e-52 209.5 224 46.4
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 1.4e-51 207.6 170 60.6
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 1.5e-50 204.1 158 64.6
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.1e-47 193.7 173 57.2
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 5.7e-45 185.7 168 57.7
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 1.4e-43 181.0 320 40.6
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.4e-27 127.1 67 89.6
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 2.0e-26 124.0 88 68.2
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 3.2e-24 116.7 306 29.7
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 1.4e-22 111.3 310 29.7
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 1.7e-20 104.4 105 55.2
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 1.4e-11 74.7 168 31.0
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 2.4e-11 73.9 48 64.6
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 7.0e-11 72.4 48 62.5
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 1.0e-09 68.6 50 60.0
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 1.3e-09 68.2 49 63.3
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 8.6e-09 65.5 113 39.8


User provided reference genes

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