Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1110 Papaver somniferum HOM05D002873 ORTHO05D002978 3.2e-22 107.8 68 100.0
PSO017G1587 Papaver somniferum HOM05D002873 ORTHO05D002978 4.8e-18 94.0 68 89.7
PSO017G6817 Papaver somniferum HOM05D002873 ORTHO05D002978 4.8e-18 94.0 68 89.7
PSO478G1863 Papaver somniferum HOM05D002873 ORTHO05D002978 1.6e-13 79.0 68 80.9
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 4.7e-13 77.4 67 65.7
Aqoxy6G00630 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 2.2e-10 68.6 66 57.6
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 2.2e-10 68.6 67 55.2
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 2.8e-10 68.2 68 55.9
Aqoxy6G02621 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 3.7e-10 67.8 66 54.5
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 8.3e-10 66.6 68 58.8
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 8.3e-10 66.6 68 55.9
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 8.3e-10 66.6 68 55.9
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 8.3e-10 66.6 68 55.9
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 8.3e-10 66.6 66 59.1
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-09 66.2 68 55.9
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.4e-09 65.9 68 55.9
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 3.1e-09 64.7 68 54.4
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 4.1e-09 64.3 68 55.9
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 5.4e-09 63.9 68 52.9
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 1.6e-08 62.4 64 54.7
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 1.6e-08 62.4 64 57.8
Aqoxy3G00629 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 66.7
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 2.0e-08 62.0 68 54.4
Aqoxy5G03086 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 5.9e-08 60.5 64 62.5
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 5.9e-08 60.5 68 47.1
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 5.9e-08 60.5 68 47.1
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 7.7e-08 60.1 67 50.7
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 7.7e-08 60.1 66 51.5
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 7.7e-08 60.1 64 51.6
GSVIVG01008194001 Vitis vinifera HOM05D002873 ORTHO05D002978 1.3e-07 59.3 67 64.2
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 1.7e-07 58.9 68 45.6
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 1.7e-07 58.9 68 45.6
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 1.7e-07 58.9 68 45.6
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 2.9e-07 58.2 65 50.8
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 2.9e-07 58.2 65 50.8
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 2.9e-07 58.2 62 51.6
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 51.5
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 6.6e-07 57.0 67 58.2
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 6.6e-07 57.0 67 58.2
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 6.6e-07 57.0 67 58.2
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 1.1e-06 56.2 66 48.5
CARHR076460 Cardamine hirsuta HOM05D002873 ORTHO05D002978 1.5e-06 55.8 67 61.2
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.9e-06 55.5 62 46.8
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 1.9e-06 55.5 66 48.5
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 47.0
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 2.5e-06 55.1 68 48.5
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 56.1
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 7.2e-06 53.5 65 49.2


User provided reference genes

Program Settings