Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 1.9e-136 489.2 253 100.0
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 1.4e-118 429.9 247 93.1
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 5.9e-77 291.6 247 61.1
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 3.8e-76 288.9 239 61.9
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 6.3e-71 271.6 237 61.2
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 7.0e-70 268.1 223 61.4
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.7e-68 263.5 234 58.5
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 5.5e-67 258.5 235 57.0
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 6.1e-66 255.0 238 55.0
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 1.8e-65 253.4 234 58.5
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 5.2e-65 251.9 235 56.6
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 2.0e-64 250.0 234 53.8
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 9.7e-64 247.7 234 54.3
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 1.7e-63 246.9 234 55.1
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.7e-63 246.9 233 53.6
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 2.8e-63 246.1 239 54.8
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 3.7e-63 245.7 235 56.6
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 4.8e-63 245.4 235 53.2
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 8.2e-63 244.6 238 51.7
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 1.1e-62 244.2 233 53.6
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 1.1e-62 244.2 233 52.8
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 1.4e-62 243.8 209 60.8
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 1.4e-62 243.8 235 53.6
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 2.4e-62 243.0 233 56.2
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 9.1e-62 241.1 234 52.6
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 2.0e-61 240.0 235 53.2
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 2.0e-61 240.0 235 53.6
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 3.5e-61 239.2 233 53.6
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 7.7e-61 238.0 209 57.9
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 3.8e-60 235.7 213 56.8
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 8.5e-60 234.6 235 50.2
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 1.5e-59 233.8 210 58.6
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 7.2e-59 231.5 235 52.3
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 9.4e-59 231.1 234 54.3
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 1.2e-58 230.7 234 51.7
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 1.2e-58 230.7 234 52.1
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 1.6e-58 230.3 231 52.4
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 3.6e-58 229.2 232 52.2
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 4.7e-58 228.8 245 50.2
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 4.7e-58 228.8 236 53.8
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 3.0e-57 226.1 236 53.4
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 3.0e-57 226.1 233 49.4
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 4.0e-57 225.7 229 52.4
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 5.2e-57 225.3 232 50.9
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 6.8e-57 224.9 229 52.4
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 8.8e-57 224.6 191 58.1
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 8.8e-57 224.6 232 53.4
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 1.5e-56 223.8 235 52.3
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 3.4e-56 222.6 177 62.1
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 1.3e-55 220.7 212 55.7
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 4.8e-55 218.8 235 51.5
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 9.1e-54 214.5 223 52.0
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 3.5e-53 212.6 226 51.3
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 1.3e-52 210.7 229 49.3
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 1.2e-50 204.1 211 47.4
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 2.8e-50 203.0 238 48.7
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.3e-49 199.9 181 56.4
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.3e-49 199.9 181 56.4
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.3e-49 199.9 201 52.2
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 4.0e-49 199.1 212 49.5
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 8.9e-49 198.0 238 44.5
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 2.0e-48 196.8 238 42.9
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 2.6e-48 196.4 200 50.5
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 3.8e-44 182.6 176 52.3
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 2.5e-43 179.9 130 63.8
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 1.5e-40 170.6 209 45.0
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 4.9e-39 165.6 156 53.8
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 9.2e-38 161.4 158 55.7
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 4.6e-37 159.1 171 45.0
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 4.6e-37 159.1 234 41.5
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 6.6e-36 155.2 234 40.2
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 1.1e-35 154.5 142 54.9
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.2e-34 151.0 136 56.6
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 3.6e-34 149.4 123 61.0
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 3.6e-34 149.4 123 61.0
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.4e-33 147.5 114 59.6
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.4e-33 147.5 114 59.6
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 4.4e-32 142.5 114 59.6
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 8.3e-31 138.3 230 39.6
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.1e-30 137.9 136 52.9
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 4.1e-30 136.0 119 58.0
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 7.0e-30 135.2 112 58.0
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 1.2e-29 134.4 116 60.3
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 4.6e-29 132.5 123 56.1
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 5.0e-28 129.0 130 54.6
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 2.5e-27 126.7 100 60.0
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 2.5e-27 126.7 124 54.0
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 4.7e-26 122.5 178 41.0
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 4.0e-25 119.4 114 52.6
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 5.2e-25 119.0 119 51.3
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 1.2e-24 117.9 108 54.6
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 9.9e-24 114.8 88 60.2
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 1.1e-22 111.3 249 28.5
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 9.2e-22 108.2 136 44.9
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 1.1e-19 101.3 194 29.9
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 3.6e-18 96.3 69 65.2
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 1.7e-15 87.4 81 56.8
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 1.1e-14 84.7 108 42.6
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 2.1e-13 80.5 83 50.6
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 3.5e-13 79.7 109 35.8
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.3e-12 77.8 99 40.4
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 3.0e-12 76.6 82 50.0
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 2.4e-06 57.0 89 30.3


User provided reference genes

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