Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 7.8e-237 823.5 459 100.0
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 2.7e-221 771.9 463 94.4
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 1.8e-148 530.0 470 68.1
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 5.9e-136 488.4 453 64.5
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 1.7e-135 486.9 454 65.2
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 4.0e-132 475.7 456 62.7
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 6.4e-130 468.4 459 63.8
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 1.9e-126 456.8 461 60.5
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 5.6e-126 455.3 457 63.2
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 1.6e-125 453.8 442 63.3
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 2.1e-125 453.4 466 60.9
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 6.2e-125 451.8 453 62.9
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 8.1e-125 451.4 456 62.7
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 4.0e-124 449.1 459 62.3
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 1.2e-123 447.6 465 60.0
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 7.5e-123 444.9 458 60.5
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 1.7e-122 443.7 455 62.4
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 8.3e-122 441.4 458 60.7
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 4.1e-121 439.1 461 60.3
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 1.2e-120 437.6 463 59.8
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 2.1e-120 436.8 457 60.8
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.7e-120 436.4 462 59.1
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 6.0e-120 435.3 462 58.7
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 6.0e-120 435.3 459 60.6
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 1.0e-119 434.5 458 61.1
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 3.0e-119 433.0 455 62.6
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 3.9e-119 432.6 462 58.2
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 6.6e-119 431.8 455 62.6
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 2.5e-118 429.9 462 58.7
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 3.6e-117 426.0 442 61.3
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 4.7e-117 425.6 455 62.0
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 6.2e-117 425.2 460 59.6
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 1.1e-116 424.5 461 58.8
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 1.1e-116 424.5 458 59.6
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 1.5e-115 420.6 430 62.6
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 2.6e-115 419.9 429 61.1
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 1.1e-113 414.5 427 59.5
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 1.9e-113 413.7 458 58.1
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 4.1e-113 412.5 384 67.2
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 4.1e-113 412.5 455 57.8
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.0e-111 407.9 454 57.3
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 6.6e-111 405.2 427 61.4
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 1.9e-110 403.7 434 59.9
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 1.9e-110 403.7 435 57.7
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 7.3e-110 401.7 454 56.8
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 9.6e-110 401.4 401 63.1
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 9.6e-110 401.4 424 60.8
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 1.2e-109 401.0 437 58.6
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 4.7e-109 399.1 496 52.6
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 8.1e-109 398.3 451 55.2
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 1.1e-108 397.9 460 57.4
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 1.1e-108 397.9 449 58.4
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 1.4e-108 397.5 424 59.4
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 1.8e-108 397.1 455 55.4
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 6.9e-108 395.2 456 58.1
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 6.9e-108 395.2 413 61.5
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 2.0e-107 393.7 410 61.7
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 4.4e-107 392.5 344 70.9
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 1.7e-106 390.6 457 55.1
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 1.7e-106 390.6 448 54.0
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 2.9e-106 389.8 424 58.7
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 6.4e-106 388.7 404 61.4
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 6.4e-106 388.7 424 58.7
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 6.4e-106 388.7 424 59.0
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 2.4e-105 386.7 448 55.4
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 9.3e-105 384.8 335 70.4
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 1.0e-103 381.3 375 65.1
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 1.7e-103 380.6 504 52.4
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 1.1e-102 377.9 382 62.8
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 2.5e-102 376.7 384 63.3
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 4.3e-102 375.9 454 54.6
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 7.3e-102 375.2 315 73.3
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 1.3e-101 374.4 314 73.2
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 3.6e-101 372.9 315 73.3
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 4.8e-101 372.5 375 64.8
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 2.4e-100 370.2 453 57.0
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 5.3e-100 369.0 382 63.1
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 5.3e-100 369.0 447 56.8
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 6.9e-100 368.6 379 61.5
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 2.0e-99 367.1 382 62.6
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 2.0e-99 367.1 382 62.6
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 2.6e-99 366.7 307 73.9
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 9.9e-99 364.8 448 56.9
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 2.2e-98 363.6 372 60.8
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 6.4e-98 362.1 308 73.7
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 6.4e-98 362.1 308 73.7
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 4.2e-97 359.4 386 60.9
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 3.9e-95 352.8 352 63.9
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 6.7e-95 352.1 352 64.8
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 9.6e-94 348.2 455 54.7
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 6.9e-92 342.0 299 62.5
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 2.6e-91 340.1 405 56.5
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 3.8e-90 336.3 260 69.6
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 1.9e-89 334.0 414 54.8
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 7.4e-86 322.0 399 53.6
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 1.3e-85 321.2 324 63.3
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 8.2e-85 318.5 333 64.0
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 4.0e-84 316.2 404 55.4
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 4.0e-84 316.2 256 67.2
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 3.4e-83 313.2 382 55.2
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 1.7e-82 310.8 441 49.7
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 3.3e-78 296.6 414 51.7
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 2.2e-74 283.9 376 54.0
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 3.0e-63 246.9 446 39.0
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 3.9e-63 246.5 202 67.8
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 3.3e-62 243.4 277 59.2
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 3.4e-59 233.4 226 60.6
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 3.8e-58 229.9 350 47.7
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 7.0e-52 209.1 344 44.5
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 1.1e-49 201.8 322 45.3
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 5.5e-49 199.5 260 45.8
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 4.7e-48 196.4 293 50.9
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 6.1e-48 196.1 311 45.0
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 3.3e-46 190.3 239 46.9
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 4.1e-44 183.3 138 73.9
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 2.5e-41 174.1 238 54.2
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 3.7e-37 160.2 286 36.4
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 2.8e-32 144.1 123 64.2
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 6.8e-31 139.4 210 41.0
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 5.4e-28 129.8 77 88.3
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 3.6e-16 90.5 60 76.7
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 6.8e-15 86.3 160 48.1
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 1.3e-13 82.0 169 33.7
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 1.2e-08 65.5 204 31.4


User provided reference genes

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