Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 6.9e-167 590.5 287 100.0
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 2.5e-164 582.0 285 99.3
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 8.8e-162 573.5 287 97.6
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.7e-160 569.3 287 96.2
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 6.5e-141 504.2 271 86.3
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 3.3e-140 501.9 286 82.9
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 4.2e-140 501.5 284 83.8
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 7.2e-140 500.7 272 86.8
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.2e-139 500.0 284 83.5
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.2e-139 500.0 286 82.2
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 2.1e-139 499.2 286 82.5
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 2.1e-139 499.2 278 83.8
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 3.6e-139 498.4 286 84.3
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 3.0e-138 495.4 288 83.0
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 3.0e-138 495.4 279 85.3
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 4.0e-138 495.0 286 80.8
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 8.9e-138 493.8 271 84.5
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.2e-137 493.4 286 82.9
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 2.6e-137 492.3 272 85.3
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 3.4e-137 491.9 276 84.1
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 3.4e-137 491.9 277 81.6
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 4.4e-137 491.5 277 83.0
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 5.7e-137 491.1 272 82.7
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 2.2e-136 489.2 281 82.9
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 2.8e-136 488.8 271 86.3
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 6.3e-136 487.6 272 84.2
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 6.3e-136 487.6 284 80.6
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 8.3e-136 487.3 272 83.1
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 8.3e-136 487.3 291 80.4
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 1.1e-135 486.9 277 82.7
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 1.1e-135 486.9 276 82.6
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 1.1e-135 486.9 291 80.4
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.4e-135 486.5 285 81.8
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 2.4e-135 485.7 286 80.1
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 3.1e-135 485.3 284 82.0
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 5.4e-135 484.6 277 83.0
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 5.4e-135 484.6 285 81.4
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 5.4e-135 484.6 285 81.4
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 9.2e-135 483.8 276 81.2
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 3.5e-134 481.9 277 80.5
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 3.5e-134 481.9 286 80.1
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 3.5e-134 481.9 276 82.2
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 5.9e-134 481.1 285 81.1
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 7.8e-134 480.7 276 80.8
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 1.0e-133 480.3 285 79.6
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 1.0e-133 480.3 293 78.5
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 1.0e-133 480.3 311 76.5
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 1.3e-133 479.9 275 80.7
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 1.7e-133 479.6 307 77.2
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 2.3e-133 479.2 284 79.6
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 2.9e-133 478.8 271 82.7
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 3.8e-133 478.4 284 79.2
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 5.0e-133 478.0 271 83.0
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 8.6e-133 477.2 277 81.2
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.5e-132 475.7 278 80.6
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 3.3e-132 475.3 287 78.0
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 7.3e-132 474.2 285 78.2
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 1.2e-131 473.4 276 79.7
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 3.6e-131 471.9 286 78.3
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 8.0e-131 470.7 277 80.1
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 1.0e-130 470.3 277 80.1
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 1.4e-130 469.9 303 75.9
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 4.0e-130 468.4 253 86.6
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 1.2e-129 466.8 279 79.9
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 1.2e-129 466.8 278 80.2
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 1.2e-129 466.8 272 80.9
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 3.4e-129 465.3 286 78.3
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 5.8e-129 464.5 285 78.2
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 5.8e-129 464.5 278 79.5
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 9.8e-129 463.8 284 78.2
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 2.2e-128 462.6 290 76.6
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 3.7e-128 461.8 276 75.4
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 3.7e-128 461.8 304 75.0
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 3.7e-128 461.8 273 79.9
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 3.7e-128 461.8 275 77.5
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.9e-128 461.5 276 76.1
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 6.4e-128 461.1 286 75.9
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 1.1e-127 460.3 276 75.7
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 1.4e-127 459.9 284 77.8
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 2.4e-127 459.1 318 71.4
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 5.4e-127 458.0 270 77.4
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 5.4e-127 458.0 276 75.4
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 7.0e-127 457.6 279 77.8
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 7.0e-127 457.6 279 77.8
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 9.2e-127 457.2 276 76.1
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 9.2e-127 457.2 276 76.1
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 1.6e-126 456.4 276 80.8
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 2.7e-126 455.7 272 76.8
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.0e-125 453.8 278 79.1
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 5.0e-125 451.4 277 76.9
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 8.6e-125 450.7 283 74.6
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 3.3e-124 448.7 276 76.1
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 4.3e-124 448.4 326 68.1
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 4.3e-124 448.4 285 73.0
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 9.5e-124 447.2 276 75.7
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 8.0e-123 444.1 284 73.9
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 3.2e-119 432.2 284 72.5
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 4.6e-118 428.3 314 67.8
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 4.6e-118 428.3 275 75.6
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 6.0e-118 427.9 288 74.3
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 3.9e-117 425.2 280 72.1
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 1.1e-116 423.7 273 72.5
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 1.2e-115 420.2 277 70.0
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 2.1e-115 419.5 271 72.3
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 1.4e-114 416.8 359 60.4
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 9.9e-113 410.6 234 82.9
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 6.6e-109 397.9 238 78.6
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.2e-107 393.7 278 69.8
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 3.1e-106 389.0 223 83.9
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 3.8e-104 382.1 294 66.0
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 6.4e-104 381.3 218 83.5
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.2e-102 377.1 199 88.9
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 7.3e-100 367.9 210 81.9
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 3.8e-96 355.5 192 84.9
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 3.9e-93 345.5 273 57.5
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 5.6e-92 341.7 280 58.2
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.6e-91 340.1 228 74.6
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 1.8e-90 336.7 272 60.3
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 3.9e-85 318.9 189 78.3
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 3.9e-85 318.9 189 78.3
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 9.9e-81 304.3 226 67.3
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 7.4e-76 288.1 226 60.6
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 3.8e-72 275.8 256 52.0
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.0e-69 267.7 156 83.3
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 3.7e-67 259.2 306 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 1.3e-64 250.8 197 60.9
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 9.4e-63 244.6 151 74.8
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 6.9e-58 228.4 199 51.8
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.5e-56 221.9 131 77.1
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 6.1e-54 215.3 262 44.7
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 1.8e-45 187.2 191 50.8
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 4.2e-39 166.0 109 71.6
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 3.4e-36 156.4 283 37.1
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 9.7e-36 154.8 211 39.8
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 3.6e-30 136.3 96 66.7
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 5.7e-28 129.0 116 58.6
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 8.6e-16 88.6 72 61.1
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 2.3e-13 80.5 46 76.1
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 8.3e-11 72.0 45 73.3


User provided reference genes

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