Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0766 Papaver somniferum HOM05D005367 ORTHO05D006328 2.4e-119 432.2 221 100.0
PSO782G1827 Papaver somniferum HOM05D005367 ORTHO05D006328 9.6e-108 393.7 221 92.8
Nn1g01501 Nelumbo nucifera HOM05D005367 ORTHO05D006328 6.1e-38 161.8 203 50.7
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 7.5e-36 154.8 208 50.5
TAR375G0799 Trochodendron aralioides HOM05D005367 ORTHO05D006328 8.3e-35 151.4 200 50.5
Nn6g33454 Nelumbo nucifera HOM05D005367 ORTHO05D006328 3.9e-32 142.5 201 47.3
Aqoxy7G00339 Aquilegia oxysepala HOM05D005367 ORTHO05D006328 5.2e-29 132.1 158 46.8
Ciclev10021865m.g Citrus clementina HOM05D005367 ORTHO05D006328 6.8e-29 131.7 207 42.0
TWI14G0016 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 6.8e-29 131.7 212 41.5
Gohir.D08G152300 Gossypium hirsutum HOM05D005367 ORTHO05D006328 2.6e-28 129.8 192 45.3
Hma1.2p1_0001F.1_g001380 Hydrangea macrophylla HOM05D005367 ORTHO05D006328 4.4e-28 129.0 186 45.7
Duzib133G0249 Durio zibethinus HOM05D005367 ORTHO05D006328 5.8e-28 128.6 173 46.8
Dinv43805 Davidia involucrata HOM05D005367 ORTHO05D006328 9.8e-28 127.9 204 43.1
Gorai.004G158200 Gossypium raimondii HOM05D005367 ORTHO05D006328 9.8e-28 127.9 192 45.3
Gohir.A08G130800 Gossypium hirsutum HOM05D005367 ORTHO05D006328 1.1e-26 124.4 187 44.4
Haze_15487 Corylus avellana HOM05D005367 ORTHO05D006328 2.4e-26 123.2 211 42.2
GSVIVG01026893001 Vitis vinifera HOM05D005367 ORTHO05D006328 4.1e-26 122.5 203 40.4
Cpa.g.sc18.245 Carica papaya HOM05D005367 ORTHO05D006328 1.6e-25 120.6 212 42.9
Gohir.A11G088100 Gossypium hirsutum HOM05D005367 ORTHO05D006328 2.0e-25 120.2 178 43.3
Sc01g0003360 Simmondsia chinensis HOM05D005367 ORTHO05D006328 2.0e-25 120.2 160 44.4
Atru.chr1.441 Acer truncatum HOM05D005367 ORTHO05D006328 3.5e-25 119.4 164 44.5
CiPaw.02G029900 Carya illinoinensis HOM05D005367 ORTHO05D006328 4.6e-25 119.0 210 38.1
Nitab4.5_0008050g0010 Nicotiana tabacum HOM05D005367 ORTHO05D006328 7.8e-25 118.2 188 41.5
Sopen05g028210 Solanum pennellii HOM05D005367 ORTHO05D006328 7.8e-25 118.2 189 43.4
Thecc.01G360700 Theobroma cacao HOM05D005367 ORTHO05D006328 7.8e-25 118.2 163 42.9
Solyc05g049880.3 Solanum lycopersicum HOM05D005367 ORTHO05D006328 3.0e-24 116.3 189 43.4
Cfa003939 Carpinus fangiana HOM05D005367 ORTHO05D006328 3.9e-24 115.9 212 41.0
Prupe.2G167900 Prunus persica HOM05D005367 ORTHO05D006328 3.9e-24 115.9 210 39.0
Duzib205G1257 Durio zibethinus HOM05D005367 ORTHO05D006328 5.0e-24 115.5 178 38.8
CSS0033809 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 8.6e-24 114.8 176 42.6
Gohir.D11G092400 Gossypium hirsutum HOM05D005367 ORTHO05D006328 8.6e-24 114.8 217 38.2
CSS0040093 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 1.1e-23 114.4 183 42.6
Gorai.007G098700 Gossypium raimondii HOM05D005367 ORTHO05D006328 1.1e-23 114.4 217 38.2
Nitab4.5_0001702g0150 Nicotiana tabacum HOM05D005367 ORTHO05D006328 1.5e-23 114.0 172 41.3
FAN01G2456 Fragaria x ananassa HOM05D005367 ORTHO05D006328 3.3e-23 112.8 193 38.3
COL.COLO4_12698 Corchorus olitorius HOM05D005367 ORTHO05D006328 4.3e-23 112.5 238 39.1
Eucgr.D02282 Eucalyptus grandis HOM05D005367 ORTHO05D006328 4.3e-23 112.5 186 43.5
PGSC0003DMG400021656 Solanum tuberosum HOM05D005367 ORTHO05D006328 5.6e-23 112.1 189 42.9
Manes.01G258500 Manihot esculenta HOM05D005367 ORTHO05D006328 7.3e-23 111.7 182 40.7
Oeu056369.1 Olea europaea HOM05D005367 ORTHO05D006328 9.5e-23 111.3 196 36.7
Cc02_g37850 Coffea canephora HOM05D005367 ORTHO05D006328 1.6e-22 110.5 181 37.0
FAN10G0042 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.6e-22 110.5 193 37.8
RcHm_v2.0_Chr1g0355051 Rosa chinensis HOM05D005367 ORTHO05D006328 1.6e-22 110.5 199 38.2
FvH4_7g14150 Fragaria vesca HOM05D005367 ORTHO05D006328 2.1e-22 110.2 193 37.8
Manes.05G036200 Manihot esculenta HOM05D005367 ORTHO05D006328 2.8e-22 109.8 184 41.8
MD07G1139200 Malus domestica HOM05D005367 ORTHO05D006328 3.6e-22 109.4 211 37.0
QL08p049031 Quercus lobata HOM05D005367 ORTHO05D006328 3.6e-22 109.4 172 39.5
vmacro13291 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 3.6e-22 109.4 167 41.9
TWI59G0064 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 4.7e-22 109.0 191 39.3
FAN06G0563 Fragaria x ananassa HOM05D005367 ORTHO05D006328 6.2e-22 108.6 193 37.3
PGR042G0868 Punica granatum HOM05D005367 ORTHO05D006328 8.1e-22 108.2 210 33.8
Peaxi162Scf00191g01425 Petunia axillaris HOM05D005367 ORTHO05D006328 1.1e-21 107.8 174 40.8
MSTRG.20826 Avicennia marina HOM05D005367 ORTHO05D006328 1.4e-21 107.5 168 39.3
Lsat_1_v5_gn_4_36280 Lactuca sativa HOM05D005367 ORTHO05D006328 1.4e-21 107.5 183 37.2
Actinidia20916 Actinidia chinensis HOM05D005367 ORTHO05D006328 1.8e-21 107.1 177 39.0
FAN03G1221 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.8e-21 107.1 193 37.3
Glyma.18G231900 Glycine max HOM05D005367 ORTHO05D006328 2.3e-21 106.7 177 39.5
Potri.014G082600 Populus trichocarpa HOM05D005367 ORTHO05D006328 4.0e-21 105.9 173 41.6
Ciclev10006075m.g Citrus clementina HOM05D005367 ORTHO05D006328 5.2e-21 105.5 184 38.6
Lj9A582T87 Lonicera japonica HOM05D005367 ORTHO05D006328 1.2e-20 104.4 191 37.2
HanXRQChr16g0522831 Helianthus annuus HOM05D005367 ORTHO05D006328 1.5e-20 104.0 188 35.6
Potri.002G158500 Populus trichocarpa HOM05D005367 ORTHO05D006328 2.0e-20 103.6 230 36.5
ECA234G3275 Erigeron canadensis HOM05D005367 ORTHO05D006328 2.6e-20 103.2 175 37.7
SalBow3G2019 Salvia bowleyana HOM05D005367 ORTHO05D006328 2.6e-20 103.2 172 37.8
RcHm_v2.0_Chr1g0354801 Rosa chinensis HOM05D005367 ORTHO05D006328 3.4e-20 102.8 201 37.3
ClCG06G003800 Citrullus lanatus HOM05D005367 ORTHO05D006328 4.4e-20 102.4 213 37.6
Lj1g0004821 Lotus japonicus HOM05D005367 ORTHO05D006328 5.8e-20 102.1 200 37.5
vmacro06668 Vaccinium macrocarpon HOM05D005367 ORTHO05D006328 7.5e-20 101.7 182 39.6
Eucgr.E00158 Eucalyptus grandis HOM05D005367 ORTHO05D006328 1.7e-19 100.5 181 37.6
Atru.chr1.440 Acer truncatum HOM05D005367 ORTHO05D006328 2.2e-19 100.1 199 38.7
CANSAT56G3377 Cannabis sativa HOM05D005367 ORTHO05D006328 2.2e-19 100.1 180 36.7
FvH4_7g29600 Fragaria vesca HOM05D005367 ORTHO05D006328 2.2e-19 100.1 218 34.9
MELO3C021217.2 Cucumis melo HOM05D005367 ORTHO05D006328 2.9e-19 99.8 182 39.0
Manes.06G148200 Manihot esculenta HOM05D005367 ORTHO05D006328 2.9e-19 99.8 166 40.4
Migut.B01742 Erythranthe guttata HOM05D005367 ORTHO05D006328 3.7e-19 99.4 168 36.3
Lalb_Chr24g0401631 Lupinus albus HOM05D005367 ORTHO05D006328 3.7e-19 99.4 165 40.0
Phvul.008G065800 Phaseolus vulgaris HOM05D005367 ORTHO05D006328 3.7e-19 99.4 191 35.6
MD01G1057500 Malus domestica HOM05D005367 ORTHO05D006328 4.9e-19 99.0 207 35.3
RcHm_v2.0_Chr1g0377581 Rosa chinensis HOM05D005367 ORTHO05D006328 6.4e-19 98.6 203 37.9
HPP92_022052 Vanilla planifolia HOM05D005367 ORTHO05D006328 6.4e-19 98.6 167 38.3
HPP92_027620 Vanilla planifolia HOM05D005367 ORTHO05D006328 6.4e-19 98.6 167 38.3
Atru.chr5.466 Acer truncatum HOM05D005367 ORTHO05D006328 8.3e-19 98.2 217 36.4
Ca_07909_v3 Cicer arietinum L. HOM05D005367 ORTHO05D006328 8.3e-19 98.2 192 34.4
Lalb_Chr01g0011531 Lupinus albus HOM05D005367 ORTHO05D006328 1.1e-18 97.8 165 39.4
AUR62004342 Chenopodium quinoa HOM05D005367 ORTHO05D006328 1.4e-18 97.4 155 38.7
MD01G1202200 Malus domestica HOM05D005367 ORTHO05D006328 1.4e-18 97.4 172 39.0
arahy.Tifrunner.gnm1.ann1.D8DQXR Arachis hypogaea HOM05D005367 ORTHO05D006328 2.4e-18 96.7 166 37.3
FAN10G3657 Fragaria x ananassa HOM05D005367 ORTHO05D006328 3.2e-18 96.3 215 35.8
COL.COLO4_14330 Corchorus olitorius HOM05D005367 ORTHO05D006328 4.1e-18 95.9 172 34.9
QL09p013904 Quercus lobata HOM05D005367 ORTHO05D006328 4.1e-18 95.9 222 35.1
arahy.Tifrunner.gnm1.ann1.G5US7K Arachis hypogaea HOM05D005367 ORTHO05D006328 5.4e-18 95.5 166 36.7
PGR031G3282 Punica granatum HOM05D005367 ORTHO05D006328 5.4e-18 95.5 210 35.2
Hund16930 Selenicereus undatus HOM05D005367 ORTHO05D006328 5.4e-18 95.5 240 34.2
CsaV3_6G000470 Cucumis sativus L. HOM05D005367 ORTHO05D006328 7.1e-18 95.1 192 34.9
FAN10G4254 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.2e-17 94.4 220 35.5
Psat3g109400 Pisum sativum HOM05D005367 ORTHO05D006328 1.2e-17 94.4 169 35.5
SGA_v2.0_scaffold11G05663 Striga asiatica HOM05D000368 ORTHO05D006328 1.2e-17 94.4 176 35.8
THA.LOC104801446 Tarenaya hassleriana HOM05D005367 ORTHO05D006328 1.2e-17 94.4 165 40.0
Rhsim03G0187100 Rhododendron simsii HOM05D005367 ORTHO05D006328 1.6e-17 94.0 227 35.7
Sed0017642 Sechium edule HOM05D005367 ORTHO05D006328 3.5e-17 92.8 166 39.8
Medtr7g077380 Medicago truncatula HOM05D005367 ORTHO05D006328 7.8e-17 91.7 176 33.5
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 1.7e-16 90.5 218 33.9
BolC8t52897H Brassica oleracea HOM05D000368 ORTHO05D000289 1.7e-16 90.5 218 33.9
BraA09t42260Z Brassica rapa HOM05D005367 ORTHO05D006328 3.0e-16 89.7 221 33.0
unitig_61.g26388 Utricularia gibba HOM05D005367 ORTHO05D006328 3.0e-16 89.7 172 36.6
VMungo1383G2792 Vigna mungo HOM05D005367 ORTHO05D006328 8.6e-16 88.2 181 35.9
EL10Ac1g00429 Beta vulgaris HOM05D005367 ORTHO05D006328 1.1e-15 87.8 177 37.3
TPR.G37815 Trifolium pratense HOM05D005367 ORTHO05D006328 1.1e-15 87.8 194 32.5
AL1G10610 Arabidopsis lyrata HOM05D005367 ORTHO05D006328 3.3e-15 86.3 205 36.6
Sp1g00570 Schrenkiella parvula HOM05D005367 ORTHO05D006328 3.3e-15 86.3 229 34.1
Thhalv10008538m.g Eutrema salsugineum HOM05D005367 ORTHO05D006328 7.3e-15 85.1 219 33.8
VMungo1383G2823 Vigna mungo HOM05D005367 ORTHO05D006328 3.6e-14 82.8 190 31.1
Ah.05g180710 Amaranthus hybridus HOM05D005367 ORTHO05D006328 1.1e-13 81.3 215 32.1
Carub.0001s0048 Capsella rubella HOM05D005367 ORTHO05D006328 1.4e-13 80.9 188 33.5
MBI17_g24635_MAGBIO Magnolia biondii HOM05D005367 ORTHO05D006328 1.8e-13 80.5 181 32.0
FAN10G3879 Fragaria x ananassa HOM05D005367 ORTHO05D006328 5.2e-13 79.0 101 42.6
FAN10G2377 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.2e-12 77.8 100 43.0
FAN28G3009 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.2e-12 77.8 100 43.0
FAN10G0871 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.5e-12 77.4 101 42.6
DCAR_010300 Daucus carota HOM05D005367 ORTHO05D006328 3.4e-12 76.3 170 31.2
AT1G01730 Arabidopsis thaliana HOM05D005367 ORTHO05D006328 5.8e-12 75.5 197 31.5
FAN03G1577 Fragaria x ananassa HOM05D005367 ORTHO05D006328 3.8e-11 72.8 142 35.9
Potri.015G145000 Populus trichocarpa HOM05D005367 ORTHO05D006328 8.4e-11 71.6 146 34.9
Dinv35219 Davidia involucrata HOM05D005367 ORTHO05D006328 1.9e-07 60.5 177 33.3
FAN06G3705 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.9e-07 60.5 213 29.1
FAN06G4288 Fragaria x ananassa HOM05D005367 ORTHO05D006328 1.9e-07 60.5 213 29.1
Sabra14G0059900 Salix brachista HOM05D005367 ORTHO05D006328 1.9e-07 60.5 121 36.4
Actinidia34119 Actinidia chinensis HOM05D005367 ORTHO05D006328 9.6e-07 58.2 191 30.9
Os04g0556900 Oryza sativa ssp. japonica HOM05D005367 ORTHO05D006328 1.2e-06 57.8 182 28.0
Aa31LG1G11100 Aethionema arabicum HOM05D005367 ORTHO05D006328 1.6e-06 57.4 87 46.0
AUR62022543 Chenopodium quinoa HOM05D000713 ORTHO05D000547 2.1e-06 57.0 74 45.9
AUR62022549 Chenopodium quinoa HOM05D005367 ORTHO05D006328 2.8e-06 56.6 122 36.9


User provided reference genes

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