Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.5e-117 426.8 325 100.0
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 1.2e-111 407.1 326 96.9
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 4.6e-58 229.2 326 69.3
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 8.7e-57 224.9 326 57.1
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.6e-53 213.4 271 75.6
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 5.8e-53 212.2 289 71.3
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 2.4e-51 206.8 265 63.0
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 5.5e-51 205.7 264 64.0
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 7.1e-51 205.3 327 65.1
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 1.6e-50 204.1 325 63.7
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 2.1e-50 203.8 264 65.2
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 3.5e-50 203.0 271 64.6
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 7.9e-50 201.8 271 67.9
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.0e-49 201.4 262 74.4
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.8e-49 200.7 317 63.4
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 3.0e-49 199.9 263 60.5
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 3.9e-49 199.5 326 53.7
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 5.1e-49 199.1 262 72.1
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 5.1e-49 199.1 262 73.3
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 6.7e-49 198.7 271 71.6
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 8.7e-49 198.4 264 64.4
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 1.1e-48 198.0 269 59.1
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 1.1e-48 198.0 262 74.0
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 1.5e-48 197.6 336 53.3
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 4.3e-48 196.1 272 66.2
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 9.6e-48 194.9 325 55.7
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 1.3e-47 194.5 276 59.4
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 1.6e-47 194.1 274 63.1
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 2.1e-47 193.7 326 53.7
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 4.8e-47 192.6 325 62.5
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 4.8e-47 192.6 330 53.0
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 4.8e-47 192.6 270 60.0
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 2.4e-46 190.3 265 59.6
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 3.1e-46 189.9 280 69.6
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 3.1e-46 189.9 264 62.5
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 3.1e-46 189.9 295 68.8
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 5.3e-46 189.1 267 58.8
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 6.9e-46 188.7 280 68.9
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 6.9e-46 188.7 280 68.9
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 6.9e-46 188.7 332 53.3
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 1.2e-45 188.0 280 69.3
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 7.6e-45 185.3 260 72.3
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 2.2e-44 183.7 326 62.3
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 3.5e-42 176.4 261 61.3
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 2.3e-41 173.7 293 66.2
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 3.9e-41 172.9 259 68.0
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 5.1e-41 172.6 263 56.7
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 7.4e-40 168.7 277 54.9
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.3e-39 167.9 319 61.4
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 1.4e-38 164.5 258 55.4
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 1.8e-38 164.1 356 32.9
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 3.1e-38 163.3 272 65.1
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 6.9e-38 162.2 188 48.9
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.5e-37 161.0 264 68.2
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 2.0e-37 160.6 251 70.1
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 4.5e-37 159.5 276 66.7
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.3e-36 157.9 186 51.1
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 1.3e-36 157.9 186 51.1
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 1.7e-36 157.5 123 63.4
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 2.9e-36 156.8 260 53.8
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 2.5e-35 153.7 263 60.5
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 1.2e-34 151.4 187 47.6
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 1.6e-34 151.0 265 52.1
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 1.3e-33 147.9 252 57.1
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.5e-32 144.4 131 58.0
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 1.9e-32 144.1 289 52.9
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 4.3e-32 142.9 365 53.7
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.4e-30 137.9 127 60.6
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 1.4e-30 137.9 263 55.1
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.6e-29 133.7 344 46.2
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 5.9e-29 132.5 132 53.0
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.9e-28 130.2 99 67.7
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 2.9e-28 130.2 189 66.7
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 6.5e-28 129.0 243 34.6
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 1.1e-27 128.3 144 51.4
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.6e-26 124.4 191 60.2
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 3.9e-25 119.8 280 33.2
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 6.3e-23 112.5 329 44.7
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 8.2e-23 112.1 112 54.5
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 1.1e-22 111.7 189 60.8
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 3.1e-22 110.2 118 52.5
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 1.5e-21 107.8 187 66.3
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 8.5e-20 102.1 123 51.2
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 1.1e-19 101.7 120 44.2
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 1.1e-19 101.7 123 43.9
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-18 96.3 83 50.6
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 1.0e-17 95.1 228 51.8
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 2.0e-16 90.9 134 41.0
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 2.6e-16 90.5 63 68.3
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.8e-14 84.3 194 44.8
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 9.1e-14 82.0 63 63.5
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 1.7e-12 77.8 63 57.1
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 2.2e-12 77.4 212 62.3
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 1.9e-11 74.3 63 55.6
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 4.2e-11 73.2 64 57.8
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 9.4e-11 72.0 121 38.0
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 8.0e-10 68.9 157 80.3
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.0e-09 68.6 45 71.1
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.2e-07 60.8 37 78.4
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 4.1e-06 56.6 38 71.1


User provided reference genes

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