Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 6.2e-123 444.1 221 100.0
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.6e-115 419.5 209 99.5
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.9e-85 318.5 211 74.9
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.1e-85 318.2 212 75.5
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.1e-85 318.2 212 75.5
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 6.7e-85 317.8 213 75.6
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.9e-84 316.2 212 75.0
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.9e-84 316.2 212 75.9
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 2.5e-84 315.8 212 75.0
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 2.5e-84 315.8 212 74.5
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 3.3e-84 315.5 212 73.6
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.3e-84 315.1 212 75.0
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.3e-84 315.1 212 75.0
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 5.7e-84 314.7 209 74.2
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 7.4e-84 314.3 212 75.0
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 9.7e-84 313.9 216 72.2
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 8.2e-83 310.8 211 73.5
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 8.2e-83 310.8 210 72.9
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 1.8e-82 309.7 213 72.8
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 2.4e-82 309.3 212 73.6
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 3.1e-82 308.9 212 72.6
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.1e-82 308.9 212 73.6
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 4.1e-82 308.5 214 72.4
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 4.1e-82 308.5 210 74.3
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 4.1e-82 308.5 220 71.4
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 9.0e-82 307.4 212 72.2
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.0e-81 306.2 210 71.9
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.0e-81 306.2 212 70.8
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 2.6e-81 305.8 211 73.5
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 2.6e-81 305.8 210 72.9
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 3.4e-81 305.4 210 71.0
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 3.4e-81 305.4 211 72.0
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 4.5e-81 305.1 211 73.0
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 5.9e-81 304.7 211 72.5
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 5.9e-81 304.7 214 71.0
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 5.9e-81 304.7 211 73.0
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 7.7e-81 304.3 210 71.4
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 7.7e-81 304.3 210 72.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 7.7e-81 304.3 213 71.8
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 7.7e-81 304.3 211 71.1
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.0e-80 303.9 212 71.2
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.0e-80 303.9 211 72.5
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.0e-80 303.9 213 72.3
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 1.3e-80 303.5 209 70.8
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.3e-80 303.5 211 70.1
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.3e-80 303.5 212 72.6
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.7e-80 303.1 212 72.2
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 2.9e-80 302.4 208 69.7
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 3.8e-80 302.0 212 70.3
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 3.8e-80 302.0 218 69.7
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 3.8e-80 302.0 212 73.1
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 5.0e-80 301.6 213 70.9
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 5.0e-80 301.6 213 70.9
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 6.5e-80 301.2 218 69.7
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 6.5e-80 301.2 215 71.2
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 8.5e-80 300.8 212 71.7
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.1e-79 300.4 212 72.2
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 1.4e-79 300.1 209 69.4
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.4e-79 300.1 212 71.2
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.9e-79 299.7 211 72.0
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 3.2e-79 298.9 209 69.4
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 3.2e-79 298.9 209 69.4
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 4.2e-79 298.5 209 68.9
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 4.2e-79 298.5 209 68.9
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 9.4e-79 297.4 209 68.9
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.6e-78 296.6 217 70.5
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.6e-78 296.6 211 70.6
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 1.6e-78 296.6 214 70.1
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 2.1e-78 296.2 210 71.9
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.1e-78 296.2 215 70.7
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 2.7e-78 295.8 212 70.3
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 7.9e-78 294.3 213 69.0
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 7.9e-78 294.3 214 69.2
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 1.0e-77 293.9 212 70.3
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.4e-77 293.5 220 66.8
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 1.4e-77 293.5 214 69.2
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.8e-77 293.1 218 68.3
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 6.7e-77 291.2 248 63.3
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.1e-76 290.4 238 65.5
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 1.5e-76 290.0 212 68.9
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 5.7e-76 288.1 210 70.0
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 5.7e-76 288.1 223 68.2
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.7e-75 286.6 232 64.2
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.1e-74 283.9 233 64.4
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 2.4e-74 282.7 210 69.0
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 6.9e-74 281.2 210 69.0
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 1.2e-73 280.4 215 67.4
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.7e-72 276.6 219 64.8
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.9e-71 273.1 209 65.6
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 3.2e-71 272.3 213 68.5
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.0e-69 267.3 223 58.7
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 7.4e-68 261.2 217 64.1
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 2.2e-67 259.6 177 71.8
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 3.7e-67 258.8 212 65.6
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 6.3e-67 258.1 208 64.4
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 5.9e-65 251.5 160 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.0e-64 250.8 170 69.4
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 3.8e-64 248.8 136 86.0
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.7e-62 242.7 217 60.4
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.6e-62 242.3 144 76.4
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 3.6e-62 242.3 175 66.3
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 4.4e-60 235.3 215 60.0
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.4e-58 230.3 159 71.7
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 3.5e-57 225.7 145 77.9
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 2.2e-56 223.0 155 64.5
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.9e-56 222.6 224 54.9
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 5.0e-56 221.9 213 58.2
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 3.2e-55 219.2 157 67.5
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 5.5e-55 218.4 336 42.3
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 1.6e-49 200.3 131 66.4
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 8.0e-46 188.0 107 82.2
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 5.7e-44 181.8 186 50.5
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 7.5e-36 154.8 147 50.3
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.8e-34 150.2 119 59.7
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 9.2e-26 121.3 63 84.1
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 6.6e-24 115.2 63 77.8
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.2e-22 110.9 73 68.5
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.4e-21 107.5 93 62.4
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 1.6e-17 94.0 144 39.6
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.3e-16 90.9 118 41.5
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.1e-15 87.8 53 77.4


User provided reference genes

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