Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0696 Papaver somniferum HOM05D004927 ORTHO05D005798 4.5e-85 318.2 192 100.0
PSO017G7268 Papaver somniferum HOM05D004927 ORTHO05D005798 3.5e-82 308.5 192 92.7
Nn3g16487 Nelumbo nucifera HOM05D004927 ORTHO05D005798 2.7e-42 176.0 166 62.0
Dinv23136 Davidia involucrata HOM05D004927 ORTHO05D005798 1.8e-38 163.3 162 58.0
Actinidia25582 Actinidia chinensis HOM05D004927 ORTHO05D005798 2.0e-37 159.8 156 58.3
Dinv11165 Davidia involucrata HOM05D004927 ORTHO05D005798 3.5e-37 159.1 156 58.3
CDE02G1054 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 1.5e-35 153.7 150 57.3
CiPaw.11G008400 Carya illinoinensis HOM05D004927 ORTHO05D005798 2.5e-35 152.9 162 53.1
MBI07_g34620_MAGBIO Magnolia biondii HOM05D004927 ORTHO05D005798 4.2e-35 152.1 161 55.9
GSVIVG01008533001 Vitis vinifera HOM05D004927 ORTHO05D005798 4.2e-35 152.1 165 52.7
CiPaw.12G042500 Carya illinoinensis HOM05D004927 ORTHO05D005798 1.2e-34 150.6 153 56.9
Actinidia33102 Actinidia chinensis HOM05D004927 ORTHO05D005798 1.6e-34 150.2 156 55.1
Aqoxy3G01521 Aquilegia oxysepala HOM05D004927 ORTHO05D005798 1.6e-34 150.2 164 51.8
CSS0046411 Camellia sinensis var. sinensis HOM05D004927 ORTHO05D005798 2.1e-34 149.8 154 55.8
Oeu056013.1 Olea europaea HOM05D004927 ORTHO05D005798 6.1e-34 148.3 158 55.1
vmacro19200 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 6.1e-34 148.3 145 58.6
Actinidia08867 Actinidia chinensis HOM05D004927 ORTHO05D005798 8.0e-34 147.9 154 55.2
Manes.14G051700 Manihot esculenta HOM05D004927 ORTHO05D005798 3.0e-33 146.0 154 55.8
PGR083G0131 Punica granatum HOM05D004927 ORTHO05D005798 3.0e-33 146.0 152 55.9
Cc04_g10030 Coffea canephora HOM05D004927 ORTHO05D005798 4.0e-33 145.6 162 50.6
CANSAT80G0771 Cannabis sativa HOM05D004927 ORTHO05D005798 6.7e-33 144.8 150 57.3
MSTRG.4598 Avicennia marina HOM05D004927 ORTHO05D005798 1.5e-32 143.7 169 51.5
Solyc03g111270.2 Solanum lycopersicum HOM05D004927 ORTHO05D005798 1.5e-32 143.7 161 53.4
Sopen03g030400 Solanum pennellii HOM05D004927 ORTHO05D005798 1.5e-32 143.7 161 53.4
Potri.015G094600 Populus trichocarpa HOM05D004927 ORTHO05D005798 3.3e-32 142.5 155 54.8
MD06G1142800 Malus domestica HOM05D004927 ORTHO05D005798 4.4e-32 142.1 163 53.4
PSO063G5502 Papaver somniferum HOM05D004927 ORTHO05D005798 7.5e-32 141.4 161 52.8
Potri.012G096900 Populus trichocarpa HOM05D004927 ORTHO05D005798 1.3e-31 140.6 154 53.2
AT5G63460 Arabidopsis thaliana HOM05D004927 ORTHO05D005798 1.7e-31 140.2 154 52.6
MSTRG.11279 Avicennia marina HOM05D004927 ORTHO05D005798 1.7e-31 140.2 165 50.9
TAR622G0157 Trochodendron aralioides HOM05D004927 ORTHO05D005798 1.7e-31 140.2 168 57.1
Ciclev10022591m.g Citrus clementina HOM05D004927 ORTHO05D005798 2.2e-31 139.8 154 53.2
Thhalv10005047m.g Eutrema salsugineum HOM05D004927 ORTHO05D005798 2.2e-31 139.8 166 50.6
Nitab4.5_0003005g0020 Nicotiana tabacum HOM05D004927 ORTHO05D005798 2.2e-31 139.8 162 51.9
TWI23G0043 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 2.2e-31 139.8 180 47.8
AL8G40520 Arabidopsis lyrata HOM05D004927 ORTHO05D005798 2.8e-31 139.4 154 53.2
unitig_61.g26197 Utricularia gibba HOM05D004927 ORTHO05D005798 3.7e-31 139.0 162 53.7
Glyma.05G047500 Glycine max HOM05D004927 ORTHO05D005798 4.8e-31 138.7 154 53.9
Prupe.5G152100 Prunus persica HOM05D004927 ORTHO05D005798 4.8e-31 138.7 182 47.3
SGA_v2.0_scaffold215G42324 Striga asiatica HOM05D004927 ORTHO05D005798 1.1e-30 137.5 145 53.8
Aa31LG1G18580 Aethionema arabicum HOM05D004927 ORTHO05D005798 1.4e-30 137.1 152 52.6
Sp2g26540 Schrenkiella parvula HOM05D004927 ORTHO05D005798 2.4e-30 136.3 154 52.6
HPP92_001413 Vanilla planifolia HOM05D004927 ORTHO05D005798 2.4e-30 136.3 160 51.9
Carub.0008s2416 Capsella rubella HOM05D004927 ORTHO05D005798 4.1e-30 135.6 159 50.9
Manes.06G118800 Manihot esculenta HOM05D004927 ORTHO05D005798 7.0e-30 134.8 155 52.9
DCAR_026226 Daucus carota HOM05D004927 ORTHO05D005798 1.6e-29 133.7 145 52.4
Atru.chr9.1061 Acer truncatum HOM05D004927 ORTHO05D005798 3.5e-29 132.5 163 49.7
THA.LOC104798947 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 4.5e-29 132.1 164 45.7
Duzib068G0304 Durio zibethinus HOM05D004927 ORTHO05D005798 7.7e-29 131.3 162 50.0
BcaC04g23330 Brassica carinata HOM05D004927 ORTHO05D005798 1.0e-28 131.0 154 50.6
MD14G1158000 Malus domestica HOM05D004927 ORTHO05D005798 1.7e-28 130.2 161 49.1
Rhsim08G0189300 Rhododendron simsii HOM05D004927 ORTHO05D005798 2.9e-28 129.4 180 47.2
TWI39G0602 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 2.9e-28 129.4 163 50.9
Duzib205G1407 Durio zibethinus HOM05D004927 ORTHO05D005798 3.8e-28 129.0 161 49.7
CARHR277310 Cardamine hirsuta HOM05D004927 ORTHO05D005798 6.5e-28 128.3 157 48.4
Lj4g0014142 Lotus japonicus HOM05D004927 ORTHO05D005798 6.5e-28 128.3 151 52.3
THA.LOC104818187 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 6.5e-28 128.3 165 46.1
Lsat_1_v5_gn_1_29040 Lactuca sativa HOM05D004927 ORTHO05D005798 8.5e-28 127.9 154 51.9
Phvul.003G210400 Phaseolus vulgaris HOM05D004927 ORTHO05D005798 8.5e-28 127.9 152 51.3
Dinv04882 Davidia involucrata HOM05D004927 ORTHO05D005798 1.9e-27 126.7 129 57.4
Sabra12G0070900 Salix brachista HOM05D004927 ORTHO05D005798 1.9e-27 126.7 186 45.7
MELO3C026211.2 Cucumis melo HOM05D004927 ORTHO05D005798 3.2e-27 125.9 161 47.2
FvH4_5g08180 Fragaria vesca HOM05D004927 ORTHO05D005798 3.2e-27 125.9 182 48.4
Gohir.D11G039650 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.2e-27 125.9 161 49.1
Oeu018539.1 Olea europaea HOM05D004927 ORTHO05D005798 3.2e-27 125.9 164 50.0
HanXRQChr07g0193231 Helianthus annuus HOM05D004927 ORTHO05D005798 5.5e-27 125.2 165 49.7
CsaV3_1G000620 Cucumis sativus L. HOM05D004927 ORTHO05D005798 7.2e-27 124.8 161 47.2
Thecc.03G128000 Theobroma cacao HOM05D004927 ORTHO05D005798 7.2e-27 124.8 161 47.2
Glyma.17G129300 Glycine max HOM05D004927 ORTHO05D005798 9.4e-27 124.4 148 50.7
PSO782G2667 Papaver somniferum HOM05D004927 ORTHO05D005798 9.4e-27 124.4 154 49.4
ECA247G2750 Erigeron canadensis HOM05D004927 ORTHO05D005798 1.2e-26 124.0 152 52.0
HanXRQChr09g0273101 Helianthus annuus HOM05D004927 ORTHO05D005798 1.2e-26 124.0 163 47.2
RcHm_v2.0_Chr7g0190331 Rosa chinensis HOM05D004927 ORTHO05D005798 2.1e-26 123.2 186 47.8
CDE05G1557 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 2.7e-26 122.9 120 56.7
Gorai.007G042600 Gossypium raimondii HOM05D004927 ORTHO05D005798 3.6e-26 122.5 165 49.1
Gohir.A11G036100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 4.7e-26 122.1 161 49.1
Sc04g0000700 Simmondsia chinensis HOM05D004927 ORTHO05D005798 4.7e-26 122.1 161 49.1
BcaB04g19918 Brassica carinata HOM05D004927 ORTHO05D005798 8.0e-26 121.3 143 51.0
Sed0011812 Sechium edule HOM05D004927 ORTHO05D005798 1.0e-25 120.9 159 47.8
Medtr4g103580 Medicago truncatula HOM05D004927 ORTHO05D005798 2.3e-25 119.8 161 47.2
SGA_v2.0_scaffold161G37795 Striga asiatica HOM05D004927 ORTHO05D005798 2.3e-25 119.8 200 41.5
A09p08260 Brassica napus HOM05D004927 ORTHO05D005798 4.0e-25 119.0 155 47.1
SalBow1G5982 Salvia bowleyana HOM05D004927 ORTHO05D005798 5.2e-25 118.6 143 53.1
Sabra15G0116000 Salix brachista HOM05D004927 ORTHO05D005798 6.8e-25 118.2 173 45.7
Zm00001eb169640 Zea mays HOM05D004927 ORTHO05D005798 6.8e-25 118.2 153 48.4
C09p09350 Brassica napus HOM05D000789 ORTHO05D005798 8.8e-25 117.9 147 49.0
BolC9t53847H Brassica oleracea HOM05D000789 ORTHO05D005798 8.8e-25 117.9 147 49.0
AagrBONN_evm.TU.Sc2ySwM_344.432 Anthoceros agrestis HOM05D004927 ORTHO05D005798 2.6e-24 116.3 150 45.3
FAN04G0012 Fragaria x ananassa HOM05D004927 ORTHO05D005798 2.2e-23 113.2 145 51.7
Psat0s2546g0040 Pisum sativum HOM05D004927 ORTHO05D005798 2.2e-23 113.2 154 46.8
Os11g0483600 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 2.8e-23 112.8 157 45.2
TPR.G19215 Trifolium pratense HOM05D004927 ORTHO05D005798 2.8e-23 112.8 159 46.5
Haze_07225 Corylus avellana HOM05D004927 ORTHO05D005798 3.7e-23 112.5 106 58.5
FAN13G0393 Fragaria x ananassa HOM05D004927 ORTHO05D005798 3.7e-23 112.5 171 46.8
Os12g0442900 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 6.3e-23 111.7 157 45.2
Migut.D01264 Erythranthe guttata HOM05D004927 ORTHO05D005798 8.3e-23 111.3 159 43.4
FAN18G3853 Fragaria x ananassa HOM05D004927 ORTHO05D005798 8.3e-23 111.3 171 46.8
SalBow1G7483 Salvia bowleyana HOM05D004927 ORTHO05D005798 1.8e-22 110.2 174 44.8
BraA09t36477Z Brassica rapa HOM05D004927 ORTHO05D005798 2.4e-22 109.8 168 43.5
Lsat_1_v5_gn_4_80380 Lactuca sativa HOM05D004927 ORTHO05D005798 3.1e-22 109.4 167 41.9
FAN08G3438 Fragaria x ananassa HOM05D004927 ORTHO05D005798 4.1e-22 109.0 171 46.8
Lalb_Chr13g0297281 Lupinus albus HOM05D004927 ORTHO05D005798 4.1e-22 109.0 154 46.8
Lalb_Chr12g0202181 Lupinus albus HOM05D004927 ORTHO05D005798 7.0e-22 108.2 157 45.2
Gorai.004G275800 Gossypium raimondii HOM05D004927 ORTHO05D005798 9.1e-22 107.8 168 46.4
Gorai.006G271700 Gossypium raimondii HOM05D004927 ORTHO05D005798 1.6e-21 107.1 161 43.5
VMungo1215G0874 Vigna mungo HOM05D004927 ORTHO05D005798 1.6e-21 107.1 135 47.4
arahy.Tifrunner.gnm1.ann1.9DG48R Arachis hypogaea HOM05D004927 ORTHO05D005798 2.0e-21 106.7 139 50.4
arahy.Tifrunner.gnm1.ann1.PKYK26 Arachis hypogaea HOM05D004927 ORTHO05D005798 2.0e-21 106.7 139 50.4
Nitab4.5_0016919g0010 Nicotiana tabacum HOM05D004927 ORTHO05D005798 1.7e-20 103.6 116 51.7
QL10p003733 Quercus lobata HOM05D004927 ORTHO05D005798 2.9e-20 102.8 128 45.3
CBR_g27958 Chara braunii HOM05D004927 ORTHO05D005798 5.0e-20 102.1 161 41.0
ATR0561G036 Amborella trichopoda HOM05D004927 ORTHO05D005798 3.3e-19 99.4 133 51.9
CBR_g36334 Chara braunii HOM05D004927 ORTHO05D005798 9.5e-19 97.8 169 39.1
Gohir.A09G247250 Gossypium hirsutum HOM05D004927 ORTHO05D005798 4.7e-18 95.5 153 43.1
HPP92_001420 Vanilla planifolia HOM05D004927 ORTHO05D005798 4.7e-18 95.5 75 69.3
Pp3c8_10310 Physcomitrium patens HOM05D004927 ORTHO05D005798 1.8e-17 93.6 159 42.1
EL10As4g23391 Beta vulgaris HOM05D004927 ORTHO05D005798 6.8e-17 91.7 143 43.4
Migut.I00501 Erythranthe guttata HOM05D004927 ORTHO05D005798 6.8e-17 91.7 80 57.5
ClCG06G017840 Citrullus lanatus HOM05D004927 ORTHO05D005798 5.7e-16 88.6 78 62.8
PGSC0003DMG400015243 Solanum tuberosum HOM05D004927 ORTHO05D005798 5.7e-16 88.6 167 41.3
vmacro16676 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 2.2e-15 86.7 114 50.0
Gohir.D08G258600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.1e-14 84.3 153 43.1
Mapoly0121s0035 Marchantia polymorpha HOM05D004927 ORTHO05D005798 9.2e-14 81.3 79 53.2
Lj9A478G96 Lonicera japonica HOM05D004927 ORTHO05D005798 1.2e-13 80.9 146 41.8
BolC2t12346H Brassica oleracea HOM05D001512 ORTHO05D001574 3.5e-13 79.3 123 40.7
Oeu037712.1 Olea europaea HOM05D004927 ORTHO05D005798 4.5e-13 79.0 53 64.2
Eucgr.B00112 Eucalyptus grandis HOM05D004927 ORTHO05D005798 7.8e-13 78.2 112 42.0
Gohir.A09G246700 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.0e-12 77.8 80 50.0
C02p62750 Brassica napus HOM05D001512 ORTHO05D001574 1.7e-12 77.0 123 39.8
CAN.G352.25 Capsicum annuum HOM05D004927 ORTHO05D005798 2.3e-12 76.6 53 69.8
SMO334G0034 Selaginella moellendorffii HOM05D004927 ORTHO05D005798 2.5e-11 73.2 152 45.4
BcaC03g18207 Brassica carinata HOM05D004927 ORTHO05D005798 7.3e-11 71.6 155 34.8
Gohir.D01G081600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.2e-08 64.3 67 49.3
Gohir.D07G062100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.2e-08 64.3 67 49.3
Gorai.007G057300 Gossypium raimondii HOM05D004927 ORTHO05D005798 1.2e-08 64.3 67 49.3
SEGI_27141 Sequoiadendron giganteum HOM05D004927 ORTHO05D005798 1.2e-08 64.3 52 61.5
AUR62029623 Chenopodium quinoa HOM05D004927 ORTHO05D005798 3.4e-08 62.8 38 68.4
Gohir.D09G248000 Gossypium hirsutum HOM05D004927 ORTHO05D005798 9.8e-08 61.2 47 59.6
COL.COLO4_28098 Corchorus olitorius HOM05D004927 ORTHO05D005798 8.3e-07 58.2 96 42.7
PRCOL_00006426 Prasinoderma coloniale HOM05D004927 ORTHO05D005798 2.4e-06 56.6 61 47.5
Gohir.D11G291800 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.2e-06 56.2 45 57.8
Cfa018832 Carpinus fangiana HOM05D004927 ORTHO05D005798 5.4e-06 55.5 91 40.7
Lsat_1_v5_gn_5_95420 Lactuca sativa HOM05D004927 ORTHO05D005798 5.4e-06 55.5 87 41.4


User provided reference genes

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