Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 2.3e-99 365.5 184 100.0
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 8.6e-94 347.1 173 98.8
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 1.1e-64 250.4 179 68.7
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 2.4e-64 249.2 178 69.1
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 3.2e-64 248.8 178 66.3
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 9.3e-64 247.3 180 67.8
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 2.7e-63 245.7 177 66.1
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.7e-62 243.0 181 68.0
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 2.5e-61 239.2 180 67.2
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 2.5e-61 239.2 163 71.2
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 3.3e-61 238.8 177 65.5
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 5.6e-61 238.0 166 71.7
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 5.6e-61 238.0 178 66.9
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 5.6e-61 238.0 174 69.0
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 9.6e-61 237.3 184 66.8
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 9.6e-61 237.3 176 67.6
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 2.1e-60 236.1 182 65.4
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 2.8e-60 235.7 199 60.8
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 3.6e-60 235.3 177 64.4
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 4.8e-60 235.0 178 63.5
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.8e-59 233.0 182 62.1
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 3.1e-59 232.3 182 65.9
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 6.9e-59 231.1 179 64.8
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 9.0e-59 230.7 182 64.8
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 1.2e-58 230.3 190 62.6
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 1.5e-58 229.9 185 62.7
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.5e-58 229.9 184 65.2
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 2.0e-58 229.6 180 64.4
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 2.0e-58 229.6 182 62.6
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 2.6e-58 229.2 179 64.2
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 2.6e-58 229.2 189 63.0
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 3.4e-58 228.8 166 65.1
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 4.4e-58 228.4 179 64.2
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 5.8e-58 228.0 184 64.1
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 5.8e-58 228.0 171 66.1
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 7.6e-58 227.6 187 60.4
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 9.9e-58 227.3 188 61.2
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 1.3e-57 226.9 163 66.9
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 2.2e-57 226.1 182 63.7
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 2.2e-57 226.1 179 66.5
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 4.9e-57 224.9 181 65.2
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 6.4e-57 224.6 186 63.4
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 1.9e-56 223.0 166 66.3
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 2.4e-56 222.6 186 62.9
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 1.6e-55 219.9 179 63.7
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 1.6e-55 219.9 180 61.1
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 1.6e-55 219.9 179 60.9
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 3.5e-55 218.8 167 66.5
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 3.5e-55 218.8 166 61.4
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 4.6e-55 218.4 137 73.7
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 2.3e-54 216.1 148 69.6
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 2.3e-54 216.1 130 73.8
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 5.1e-54 214.9 166 62.7
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 6.6e-54 214.5 181 59.7
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 6.6e-54 214.5 176 62.5
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 8.7e-54 214.2 166 61.4
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 1.1e-53 213.8 166 62.7
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 1.5e-53 213.4 189 58.7
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.9e-53 213.0 140 68.6
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 2.5e-53 212.6 161 64.0
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 5.6e-53 211.5 166 63.9
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 5.6e-53 211.5 166 63.9
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 5.6e-53 211.5 166 63.9
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 5.6e-53 211.5 175 58.9
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 5.6e-53 211.5 166 63.9
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 7.3e-53 211.1 187 59.4
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 2.1e-52 209.5 166 60.8
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 4.8e-52 208.4 186 60.2
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 4.8e-52 208.4 181 60.8
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 6.2e-52 208.0 189 58.2
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.4e-51 206.8 192 57.3
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 1.8e-51 206.5 188 59.0
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 2.4e-51 206.1 196 57.1
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 2.4e-51 206.1 182 54.9
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 5.3e-51 204.9 162 62.3
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 5.3e-51 204.9 162 62.3
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.9e-51 204.5 162 62.3
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 9.0e-51 204.1 129 74.4
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 9.0e-51 204.1 130 72.3
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 1.2e-50 203.8 208 52.9
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 7.6e-50 201.1 205 55.6
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 7.6e-50 201.1 178 59.0
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 1.3e-49 200.3 194 57.2
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.2e-48 195.7 175 57.7
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 9.3e-48 194.1 185 54.6
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.1e-47 193.0 179 57.0
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.1e-47 193.0 184 57.1
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.9e-45 186.4 127 63.8
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 3.3e-45 185.7 186 53.8
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 8.1e-44 181.0 217 47.5
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 2.6e-42 176.0 146 62.3
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.4e-40 170.2 140 60.7
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 7.1e-40 167.9 112 65.2
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.3e-38 163.7 180 51.1
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.8e-36 156.0 186 49.5
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.2e-34 150.6 196 48.5
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 3.8e-33 145.6 163 45.4
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 7.2e-32 141.4 185 46.5
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 3.3e-29 132.5 138 45.7
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 3.7e-28 129.0 76 75.0
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.1e-24 117.5 145 42.1
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 2.7e-23 112.8 90 65.6
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.5e-18 97.1 123 50.4
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 2.6e-18 96.3 58 67.2
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.3e-17 94.0 75 60.0
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 6.1e-15 85.1 88 59.1
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.0e-13 80.1 45 73.3
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.6e-13 79.7 105 47.6
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 2.0e-10 70.1 61 52.5
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.7e-09 67.0 37 70.3
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 4.2e-08 62.4 56 51.8
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 1.8e-06 57.0 59 42.4


User provided reference genes

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