Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0660 Papaver somniferum HOM05D057890 ORTHO05D004092 0.0e+00 1733.0 1007 100.0
PSO782G3290 Papaver somniferum HOM05D057890 ORTHO05D004092 1.5e-293 1013.1 702 85.2
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 8.4e-50 203.4 1034 27.9
PSO782G3516 Papaver somniferum HOM05D064671 ORTHO05D004092 6.6e-47 193.7 383 40.2
PSO478G2886 Papaver somniferum HOM05D064671 ORTHO05D004092 1.5e-46 192.6 372 40.1
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 1.4e-41 176.0 373 38.9
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 2.4e-20 105.5 233 40.3
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 1.1e-17 96.7 220 41.4
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 1.4e-17 96.3 222 41.4
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.0e-15 90.1 223 36.8
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 2.3e-15 89.0 207 38.6
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 3.9e-15 88.2 249 36.1
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 6.7e-15 87.4 231 36.4
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 6.7e-15 87.4 321 31.8
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 1.5e-14 86.3 222 37.4
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 3.3e-14 85.1 292 35.3
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 9.7e-14 83.6 231 36.8
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 1.3e-13 83.2 218 35.3
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 1.3e-13 83.2 241 34.9
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 1.7e-13 82.8 332 32.8
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 2.2e-13 82.4 234 35.5
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 3.1e-12 78.6 231 36.8
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 4.1e-12 78.2 215 37.2
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 5.3e-12 77.8 235 33.6
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 9.1e-12 77.0 444 27.9
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.2e-11 76.6 284 33.5
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 1.5e-11 76.3 242 35.1
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 2.0e-11 75.9 468 29.9
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 4.5e-11 74.7 248 34.7
Nn1g01463 Nelumbo nucifera HOM05D004189 ORTHO05D004092 5.9e-11 74.3 206 36.9
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 7.7e-11 73.9 314 32.2
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 6.5e-10 70.9 241 34.4
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 1.4e-09 69.7 344 31.4
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 1.4e-09 69.7 248 31.5
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 2.5e-09 68.9 509 24.8
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.2e-09 68.6 341 30.5
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 3.2e-09 68.6 214 33.2
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.2e-09 68.2 311 31.5
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 5.5e-09 67.8 242 33.9
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 5.5e-09 67.8 236 33.1
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 9.4e-09 67.0 304 31.6
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 2.1e-08 65.9 338 30.8
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.1e-08 65.9 341 30.5
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 2.7e-08 65.5 353 29.7
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 3.6e-08 65.1 584 27.6
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 3.6e-08 65.1 231 33.3
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 6.1e-08 64.3 225 32.0
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 1.4e-07 63.2 66 51.5
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.8e-07 62.8 240 29.2
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.3e-07 62.4 305 30.5
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 2.3e-07 62.4 493 26.6
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 3.0e-07 62.0 203 33.0
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 3.0e-07 62.0 204 34.8
CiPaw.03G106300 Carya illinoinensis HOM05D004189 ORTHO05D004092 3.9e-07 61.6 215 30.2
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 8.8e-07 60.5 262 30.9
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 8.8e-07 60.5 200 31.0
Ca_25745_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 4.4e-06 58.2 361 26.6
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 5.7e-06 57.8 158 35.4
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 7.4e-06 57.4 300 30.7
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 7.4e-06 57.4 206 35.4
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 9.7e-06 57.0 204 33.8


User provided reference genes

Program Settings