Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 3.1e-94 348.6 196 100.0
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.8e-86 322.8 194 92.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 4.7e-58 228.4 145 77.9
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 4.4e-56 221.9 145 73.1
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 1.3e-55 220.3 145 74.5
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.2e-55 219.5 145 72.4
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.4e-54 216.9 145 73.1
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 1.9e-54 216.5 143 72.0
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.9e-54 216.5 196 61.7
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 3.2e-54 215.7 145 72.4
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 9.2e-54 214.2 144 73.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 9.2e-54 214.2 201 59.7
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 9.2e-54 214.2 146 74.7
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 3.5e-53 212.2 144 70.1
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 4.6e-53 211.8 143 71.3
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 6.0e-53 211.5 143 73.4
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 6.0e-53 211.5 148 72.3
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 6.0e-53 211.5 145 68.3
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 7.8e-53 211.1 145 71.0
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 7.8e-53 211.1 142 72.5
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.0e-52 210.7 147 66.0
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.0e-52 210.7 147 70.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.3e-52 210.3 145 70.3
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.7e-52 209.9 146 70.5
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.3e-52 209.5 145 70.3
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 3.0e-52 209.1 193 59.6
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 3.9e-52 208.8 146 69.9
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 5.1e-52 208.4 145 66.2
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 6.6e-52 208.0 193 59.1
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.1e-51 207.2 145 71.0
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 1.1e-51 207.2 187 58.3
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.1e-51 207.2 147 68.7
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.1e-51 207.2 141 71.6
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.9e-51 206.5 143 69.2
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.5e-51 206.1 145 71.0
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.5e-51 206.1 146 69.9
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 3.3e-51 205.7 145 71.7
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 4.3e-51 205.3 145 66.9
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 5.6e-51 204.9 193 58.0
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 5.6e-51 204.9 141 69.5
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 7.3e-51 204.5 141 70.2
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 7.3e-51 204.5 196 56.6
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 9.6e-51 204.1 143 72.7
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.2e-50 203.8 145 66.2
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.2e-50 203.8 143 69.2
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.2e-50 203.8 143 69.2
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.6e-50 203.4 147 66.0
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 2.8e-50 202.6 143 65.7
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 1.1e-49 200.7 140 70.0
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.1e-49 200.7 141 69.5
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 1.8e-49 199.9 144 70.1
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.8e-49 199.9 146 66.4
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 2.4e-49 199.5 145 68.3
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.1e-49 199.1 145 64.1
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 4.0e-49 198.7 143 63.6
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 5.3e-49 198.4 145 68.3
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 6.9e-49 198.0 145 66.9
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 2.0e-48 196.4 145 69.0
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 2.6e-48 196.1 176 58.0
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 3.4e-48 195.7 143 65.7
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 7.6e-48 194.5 143 62.9
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 9.9e-48 194.1 143 61.5
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 2.2e-47 193.0 141 68.8
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 2.9e-47 192.6 149 63.8
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 3.8e-47 192.2 143 63.6
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.8e-47 192.2 143 67.1
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 4.9e-47 191.8 143 64.3
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 6.4e-47 191.4 143 65.0
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 3.2e-46 189.1 143 62.9
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 4.2e-46 188.7 143 64.3
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 4.2e-46 188.7 147 63.3
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 9.3e-46 187.6 148 62.8
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.2e-45 187.2 143 61.5
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.0e-44 184.1 145 63.4
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 1.3e-44 183.7 143 61.5
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.3e-44 183.0 143 61.5
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 2.3e-44 183.0 196 51.5
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 3.0e-44 182.6 142 61.3
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 3.9e-44 182.2 142 59.9
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 3.3e-43 179.1 145 62.1
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.3e-42 177.2 144 61.1
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 3.4e-40 169.1 124 66.9
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 3.8e-39 165.6 146 60.3
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 3.4e-32 142.5 131 53.4
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 4.5e-32 142.1 140 48.6
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 7.9e-29 131.3 110 56.4
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.6e-26 123.6 144 45.8
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 4.0e-25 119.0 86 62.8
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.7e-23 113.6 136 42.6
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 1.1e-22 110.9 58 84.5
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 2.5e-19 99.8 100 56.0
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.7e-18 95.9 57 71.9
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 6.5e-15 85.1 105 39.0
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 5.5e-14 82.0 78 57.7
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 9.4e-14 81.3 78 55.1
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 2.3e-12 76.6 67 53.7
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 3.3e-11 72.8 60 55.0
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 1.2e-08 64.3 71 49.3


User provided reference genes

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