Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 1.5e-192 676.0 344 100.0
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 5.5e-187 657.5 344 92.4
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 4.6e-109 398.7 280 64.6
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 3.0e-108 396.0 278 65.5
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 8.8e-108 394.4 280 64.3
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 1.5e-107 393.7 280 63.9
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 7.4e-107 391.3 279 65.9
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 2.2e-106 389.8 280 63.2
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 2.2e-106 389.8 277 63.5
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 4.8e-106 388.7 280 62.9
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.1e-105 387.5 280 63.6
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.4e-105 387.1 280 63.6
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 2.0e-104 383.3 277 64.3
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 3.4e-104 382.5 280 62.9
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 5.9e-104 381.7 265 67.2
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 5.0e-103 378.6 280 62.1
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 8.5e-103 377.9 283 61.1
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 1.4e-102 377.1 277 63.2
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 1.4e-102 377.1 277 63.5
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 7.2e-102 374.8 280 61.1
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 7.2e-102 374.8 282 59.2
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 9.4e-102 374.4 280 61.4
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 2.7e-101 372.9 280 61.1
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 4.7e-101 372.1 280 60.0
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 4.7e-101 372.1 276 60.9
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 3.9e-100 369.0 280 59.6
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 6.7e-100 368.2 282 57.8
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 6.7e-100 368.2 274 60.2
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 6.7e-100 368.2 276 59.8
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.1e-99 367.5 281 59.8
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 1.5e-99 367.1 276 60.9
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 1.5e-99 367.1 277 59.6
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 2.0e-99 366.7 277 59.6
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.6e-99 366.3 282 57.4
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 7.4e-99 364.8 282 56.7
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 7.4e-99 364.8 278 59.0
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 7.4e-99 364.8 278 59.0
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 1.3e-98 364.0 282 57.8
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.3e-98 364.0 282 57.1
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 1.7e-98 363.6 281 60.1
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.7e-98 363.6 282 56.7
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 2.2e-98 363.2 280 58.9
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 2.2e-98 363.2 330 53.3
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 4.8e-98 362.1 280 58.9
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 7.0e-97 358.2 280 59.6
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 4.5e-96 355.5 281 60.1
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 1.3e-95 354.0 277 59.9
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 1.7e-95 353.6 281 57.7
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 2.2e-95 353.2 274 59.9
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 2.2e-95 353.2 281 58.0
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 3.8e-95 352.4 280 57.9
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 6.5e-95 351.7 264 56.4
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 1.1e-94 350.9 278 57.9
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.9e-94 350.1 281 57.3
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 4.2e-94 349.0 280 57.1
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 5.5e-94 348.6 279 59.5
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 5.5e-94 348.6 296 57.4
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 7.2e-94 348.2 281 55.5
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 1.2e-93 347.4 251 62.5
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.2e-93 347.4 280 58.9
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 2.1e-93 346.7 256 60.5
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 2.7e-93 346.3 322 51.6
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 4.7e-93 345.5 321 53.0
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 6.1e-93 345.1 321 52.3
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 8.0e-93 344.7 281 55.9
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 8.0e-93 344.7 337 49.6
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 3.0e-92 342.8 337 49.3
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 4.0e-92 342.4 277 57.8
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.1e-91 340.9 337 49.0
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 1.5e-91 340.5 284 56.3
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 2.2e-90 336.7 256 58.2
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 2.2e-90 336.7 277 55.6
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.8e-90 336.3 286 53.8
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 4.8e-90 335.5 278 55.4
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 8.2e-90 334.7 277 57.0
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 1.4e-89 334.0 280 55.0
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 1.2e-88 330.9 282 55.7
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 2.0e-88 330.1 246 59.3
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 2.2e-87 326.6 278 54.7
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 1.5e-86 323.9 274 55.5
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 2.5e-86 323.2 327 49.5
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 1.2e-85 320.9 274 55.5
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 1.6e-85 320.5 288 55.2
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 1.8e-81 307.0 253 54.9
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 1.2e-80 304.3 290 48.3
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 1.3e-79 300.8 277 51.6
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 1.3e-79 300.8 279 53.0
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 1.1e-73 281.2 241 54.4
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 5.4e-73 278.9 214 56.5
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 7.0e-73 278.5 277 49.8
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 3.5e-72 276.2 254 51.6
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 4.5e-72 275.8 280 47.9
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.5e-70 270.8 279 45.9
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 3.3e-70 269.6 253 50.2
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 2.1e-69 266.9 212 55.2
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.4e-68 264.2 191 62.3
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 3.7e-66 256.1 181 64.1
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 8.3e-66 255.0 262 47.3
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 8.3e-66 255.0 258 48.4
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 2.4e-65 253.4 192 61.5
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 4.6e-64 249.2 192 60.4
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 2.3e-63 246.9 282 45.7
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.9e-63 246.1 314 43.0
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 2.0e-59 233.8 253 44.7
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.0e-59 233.8 280 42.5
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 1.2e-56 224.6 249 43.0
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 3.0e-55 219.9 289 39.4
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 1.6e-53 214.2 192 50.0
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.4e-52 211.1 282 41.5
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 5.2e-52 209.1 192 53.1
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 7.5e-51 205.3 123 77.2
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 8.3e-50 201.8 284 40.1
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.2e-48 198.0 209 49.3
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 9.5e-46 188.3 194 46.4
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 9.5e-46 188.3 324 33.6
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 1.2e-45 188.0 316 33.9
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.6e-45 186.4 165 53.3
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 6.8e-44 182.2 281 36.3
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 6.4e-42 175.6 126 59.5
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 1.9e-41 174.1 158 51.9
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 2.4e-41 173.7 266 37.6
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 5.4e-41 172.6 119 67.2
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 3.5e-40 169.9 259 35.9
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 6.0e-40 169.1 134 58.2
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.6e-37 161.0 239 37.2
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 4.4e-35 152.9 121 57.9
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 2.2e-34 150.6 126 54.8
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 7.1e-33 145.6 121 53.7
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 7.8e-32 142.1 164 44.5
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.1e-30 138.3 121 51.2
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 4.0e-28 129.8 106 54.7
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 2.4e-20 104.0 88 53.4
PSO210G5020 Papaver somniferum HOM05D001459 ORTHO05D003498 3.1e-20 103.6 52 86.5
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 3.4e-19 100.1 80 52.5
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 5.8e-19 99.4 117 41.0
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 1.7e-18 97.8 76 56.6
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 7.1e-17 92.4 66 68.2
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.2e-16 91.7 71 59.2
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 6.7e-15 85.9 73 54.8
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 6.7e-15 85.9 60 60.0
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 3.7e-13 80.1 199 33.7
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.7e-13 80.1 64 53.1
BcaC02g10248 Brassica carinata HOM05D000590 ORTHO05D006825 5.8e-11 72.8 50 48.0
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 3.8e-10 70.1 103 36.9
Zm00001eb119810 Zea mays HOM05D000590 ORTHO05D006825 4.9e-10 69.7 75 41.3
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 6.5e-10 69.3 65 58.5
MD07G1149100 Malus domestica HOM05D000590 ORTHO05D006825 1.9e-06 57.8 44 59.1


User provided reference genes

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