Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 0.0e+00 2728.4 1363 100.0
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 0.0e+00 2649.4 1363 97.1
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.0e-228 796.2 1424 38.0
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 6.8e-228 795.4 1460 37.1
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.1e-225 788.1 1432 38.4
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 1.8e-212 744.2 1362 37.2
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 1.2e-211 741.5 1361 37.4
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 9.8e-211 738.4 1621 35.7
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 7.3e-206 722.2 1383 36.6
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.2e-205 721.5 1374 36.8
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 2.7e-192 677.2 1360 36.8
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 9.5e-190 668.7 1363 35.3
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 2.2e-186 657.5 1428 35.4
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 9.2e-185 652.1 1416 34.4
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 7.3e-182 642.5 1413 34.6
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 2.0e-179 634.4 1376 33.9
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 7.3e-174 615.9 1378 33.7
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 3.2e-169 600.5 1483 32.1
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 3.5e-168 597.0 1381 32.6
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 4.8e-165 586.6 1333 33.5
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 2.6e-163 580.9 1443 33.1
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 3.8e-162 577.0 1444 32.4
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 1.2e-160 572.0 1409 34.0
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 4.3e-158 563.5 1392 32.9
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 2.0e-155 554.7 1410 32.2
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 8.4e-154 549.3 1329 32.7
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 8.4e-154 549.3 1355 31.6
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 7.1e-153 546.2 1450 32.2
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 1.8e-151 541.6 1298 31.7
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 8.7e-151 539.3 1346 31.9
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 1.1e-150 538.9 1447 31.1
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 3.3e-150 537.3 1365 31.9
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 3.3e-150 537.3 1469 32.4
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 5.7e-150 536.6 1393 30.9
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 1.1e-148 532.3 1558 31.2
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 4.1e-148 530.4 1387 31.6
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 9.0e-148 529.3 1427 30.8
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 5.9e-147 526.6 1391 31.4
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 5.9e-147 526.6 1376 31.1
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 7.6e-147 526.2 1451 31.5
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 6.5e-146 523.1 1381 31.5
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 5.5e-145 520.0 1379 31.0
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 7.9e-144 516.2 1360 30.4
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 5.1e-143 513.5 1304 31.4
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 1.5e-142 511.9 1379 31.2
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 1.9e-142 511.5 1402 31.0
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 2.5e-142 511.1 1399 30.8
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 2.5e-142 511.1 1399 30.8
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 3.3e-142 510.8 1399 30.5
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 7.4e-142 509.6 1344 32.7
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 3.1e-140 504.2 1411 30.3
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 3.1e-140 504.2 1372 30.6
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 4.1e-140 503.8 1389 30.4
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 9.1e-140 502.7 1377 30.8
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 9.1e-140 502.7 1374 30.7
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 1.2e-139 502.3 1371 30.3
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 5.9e-139 500.0 1386 31.0
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 1.3e-138 498.8 1372 31.6
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 6.5e-138 496.5 1453 29.7
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 2.5e-137 494.6 1493 29.7
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 2.5e-137 494.6 1355 29.8
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 7.2e-137 493.0 1335 30.4
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 9.4e-137 492.7 1458 29.6
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 1.4e-135 488.8 1451 29.6
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 1.5e-134 485.3 1547 29.5
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 7.4e-134 483.0 1539 29.0
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 1.3e-133 482.3 1385 30.2
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 4.8e-133 480.3 1383 29.1
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 2.4e-132 478.0 1379 31.3
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 1.4e-129 468.8 1332 28.5
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 5.5e-129 466.8 1391 28.8
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 3.9e-127 460.7 1339 29.8
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 1.3e-125 455.7 1378 29.8
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 2.4e-124 451.4 1381 29.9
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 2.4e-124 451.4 1354 29.9
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 3.5e-123 447.6 1452 30.0
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 2.8e-117 427.9 1306 29.7
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 2.4e-116 424.9 1405 29.3
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 2.0e-115 421.8 1463 28.7
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 1.1e-113 416.0 1371 27.7
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 4.7e-112 410.6 999 33.1
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 2.0e-110 405.2 1380 28.2
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 2.7e-107 394.8 1165 30.6
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 3.5e-107 394.4 1334 29.5
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 1.5e-105 389.0 1387 27.9
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 1.4e-103 382.5 1369 26.7
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 3.7e-101 374.4 472 42.2
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 4.9e-101 374.0 1048 31.1
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 1.5e-94 352.4 1128 29.2
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 4.9e-93 347.4 1369 26.4
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 1.6e-91 342.4 852 32.3
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 8.6e-90 336.7 1342 26.9
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.6e-88 332.4 282 59.2
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 2.8e-88 331.6 365 47.9
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 5.4e-84 317.4 462 39.2
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 3.5e-83 314.7 1345 26.1
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 8.6e-82 310.1 1026 27.4
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.9e-81 308.9 1026 27.4
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 4.1e-76 291.2 638 35.1
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 3.9e-74 284.6 275 53.8
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 2.8e-72 278.5 655 33.1
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.4e-68 266.2 406 40.4
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 4.3e-65 254.6 409 37.4
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 6.9e-63 247.3 461 39.7
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.9e-60 239.2 215 59.5
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.2e-59 236.5 204 60.8
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 5.1e-58 231.1 444 32.2
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.4e-52 212.2 295 42.0
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 7.6e-38 164.1 426 29.1
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 2.5e-36 159.1 137 56.9
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 9.3e-36 157.1 109 67.9
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 6.0e-35 154.5 107 68.2
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 6.0e-35 154.5 253 38.3
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 6.7e-34 151.0 201 43.3
PSO063G1330 Papaver somniferum HOM05D004942 ORTHO05D005687 1.5e-33 149.8 363 34.4
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 4.3e-33 148.3 116 62.9
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.1e-27 129.4 96 66.7
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.7e-27 129.0 141 46.8
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 6.1e-27 127.9 82 70.7
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 1.4e-26 126.7 1328 21.0
TAR629G0168 Trochodendron aralioides HOM05D004942 ORTHO05D005687 2.2e-24 119.4 395 29.4
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 7.7e-22 110.9 81 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1676 Anthoceros agrestis HOM05D004942 ORTHO05D005687 1.3e-21 110.2 463 25.7
Aqoxy2G01048 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 8.5e-21 107.5 131 47.3
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 9.4e-20 104.0 153 39.9
PSO541G2259 Papaver somniferum HOM05D001049 ORTHO05D049301 3.0e-18 99.0 90 63.3
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 1.5e-17 96.7 85 58.8
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.6e-14 85.9 58 70.7
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 5.0e-13 81.6 135 37.0
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 6.5e-13 81.3 97 46.4
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 8.5e-13 80.9 58 67.2
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.5e-12 79.3 58 65.5
MCO07G070 Micromonas commoda HOM05D004942 ORTHO05D005687 1.6e-11 76.6 149 28.9
SHI10796 Sapria himalayana HOM05D004942 ORTHO05D005687 8.0e-11 74.3 126 34.9
Oeu028721.1 Olea europaea HOM05D004942 ORTHO05D005687 2.6e-06 59.3 102 35.3
Sabra02G0177600 Salix brachista HOM05D000590 ORTHO05D005739 2.6e-06 59.3 137 30.7
Potri.002G232800 Populus trichocarpa HOM05D000590 ORTHO05D005739 3.5e-06 58.9 158 29.1


User provided reference genes

Program Settings