Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 7.3e-198 693.7 359 100.0
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 2.9e-194 681.8 359 97.8
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.0e-135 487.3 366 68.9
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.4e-132 476.1 362 68.8
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 5.3e-132 474.9 368 67.9
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 6.1e-128 461.5 359 66.6
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 6.7e-127 458.0 366 66.4
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 3.3e-126 455.7 371 63.6
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 9.7e-126 454.1 370 65.9
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.2e-125 453.0 366 66.1
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 6.3e-125 451.4 364 64.6
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 1.1e-124 450.7 375 64.5
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 1.1e-124 450.7 359 64.6
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 2.4e-124 449.5 365 65.5
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 3.1e-124 449.1 377 64.5
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 5.3e-124 448.4 363 64.5
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 7.0e-124 448.0 363 64.2
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.2e-123 447.2 360 65.6
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 2.0e-123 446.4 368 66.8
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 2.0e-123 446.4 373 62.2
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.0e-123 446.4 360 64.7
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 2.6e-123 446.0 365 64.7
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.5e-123 445.7 361 65.1
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 3.5e-123 445.7 357 64.1
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 3.5e-123 445.7 361 63.7
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 3.5e-123 445.7 369 62.3
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 4.5e-123 445.3 367 62.9
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 4.5e-123 445.3 375 61.1
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 5.9e-123 444.9 361 64.3
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 5.9e-123 444.9 364 62.9
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 5.9e-123 444.9 364 62.9
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 7.7e-123 444.5 376 61.4
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 1.0e-122 444.1 374 61.8
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.3e-122 443.7 363 64.2
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 1.7e-122 443.4 387 63.6
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 2.2e-122 443.0 365 64.9
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 2.9e-122 442.6 365 64.1
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.9e-122 442.6 364 62.6
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 3.8e-122 442.2 378 63.5
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 3.8e-122 442.2 390 60.8
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 5.0e-122 441.8 369 63.7
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 6.5e-122 441.4 360 63.6
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 1.1e-121 440.7 360 63.6
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 1.5e-121 440.3 373 63.3
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.9e-121 439.9 364 62.1
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 5.5e-121 438.3 363 63.9
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 5.5e-121 438.3 360 63.3
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 7.2e-121 438.0 364 63.2
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.6e-120 436.8 363 63.1
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 2.1e-120 436.4 362 63.8
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 2.7e-120 436.0 368 63.3
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 3.6e-120 435.6 371 63.9
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 6.1e-120 434.9 365 63.0
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 8.0e-120 434.5 370 62.7
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.0e-119 434.1 361 65.4
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.8e-119 433.3 360 61.9
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.8e-119 433.3 362 60.8
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 4.0e-119 432.2 363 61.2
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 5.2e-119 431.8 376 63.6
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 5.2e-119 431.8 376 63.6
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 6.7e-119 431.4 387 61.8
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 6.7e-119 431.4 387 61.8
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 6.7e-119 431.4 362 60.2
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 1.5e-118 430.3 362 60.2
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.5e-118 430.3 371 62.3
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.0e-118 429.9 294 73.5
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 2.0e-118 429.9 364 61.0
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 2.0e-118 429.9 376 60.9
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 2.0e-118 429.9 369 62.9
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 2.0e-118 429.9 368 63.3
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 4.4e-118 428.7 362 61.3
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 5.7e-118 428.3 374 61.8
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 7.5e-118 427.9 362 59.7
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 7.5e-118 427.9 357 61.3
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 7.5e-118 427.9 362 59.7
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 9.7e-118 427.6 362 59.9
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 1.3e-117 427.2 371 61.5
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 1.7e-117 426.8 362 59.9
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.7e-117 426.8 363 62.3
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 1.7e-117 426.8 373 61.4
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 2.2e-117 426.4 302 71.5
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 2.8e-117 426.0 362 60.5
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 2.8e-117 426.0 365 61.6
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 3.7e-117 425.6 362 60.2
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 6.3e-117 424.9 368 60.1
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 1.1e-116 424.1 368 61.7
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 1.4e-116 423.7 367 61.9
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 7.0e-116 421.4 372 58.9
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 1.2e-115 420.6 366 60.1
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 1.6e-115 420.2 372 61.0
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 5.0e-114 415.2 296 70.3
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 1.1e-113 414.1 358 59.5
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 1.1e-113 414.1 365 61.4
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 1.1e-113 414.1 376 59.8
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 7.2e-113 411.4 373 60.9
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 3.7e-109 399.1 333 64.0
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 6.3e-109 398.3 453 51.7
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 8.3e-109 397.9 303 69.3
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 7.0e-108 394.8 363 56.5
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 5.0e-106 388.7 338 63.0
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 1.1e-105 387.5 341 60.7
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 1.5e-105 387.1 335 63.0
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 1.9e-105 386.7 366 57.1
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 3.3e-105 386.0 343 60.3
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 9.5e-105 384.4 300 63.3
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.2e-104 384.0 297 64.0
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.6e-104 383.6 308 62.3
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.7e-101 373.6 377 54.9
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 2.7e-99 366.3 321 57.3
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 4.5e-99 365.5 341 59.5
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 4.7e-96 355.5 297 59.6
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 1.8e-95 353.6 311 59.2
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 1.2e-94 350.9 300 60.7
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.5e-94 350.5 298 60.7
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 5.8e-94 348.6 371 53.9
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.7e-93 347.1 286 61.2
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.7e-91 339.7 229 74.7
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 1.0e-90 337.8 295 54.6
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 1.8e-87 327.0 360 50.3
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 5.2e-87 325.5 194 80.9
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 6.8e-87 325.1 304 59.2
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 8.9e-87 324.7 194 79.9
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 7.5e-86 321.6 299 58.9
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 6.4e-85 318.5 194 78.9
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 1.9e-84 317.0 298 57.4
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 2.4e-63 246.9 153 77.8
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 1.1e-52 211.5 202 54.0
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.7e-51 206.8 126 78.6
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 1.1e-41 174.9 212 46.2
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.5e-41 174.5 100 83.0
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 4.0e-39 166.4 195 51.3
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 6.5e-37 159.1 91 81.3
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 3.0e-34 150.2 168 52.4
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.0e-26 125.2 101 68.3
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 5.1e-26 122.9 88 69.3
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 4.1e-23 113.2 73 68.5
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 6.9e-23 112.5 149 47.0
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 2.0e-22 110.9 73 67.1
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.3e-21 108.2 146 47.9
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.9e-20 104.4 252 34.1
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 2.1e-11 74.3 43 76.7
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.8e-10 71.2 82 47.6
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 8.2e-08 62.4 73 50.7


User provided reference genes

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