Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 2.9e-241 838.2 430 100.0
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 7.3e-229 797.0 430 96.0
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 5.3e-94 349.0 493 44.0
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 1.3e-92 344.4 283 63.3
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 3.5e-90 336.3 351 54.1
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 1.1e-88 331.3 285 61.4
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 1.6e-87 327.4 455 43.5
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 2.4e-86 323.6 286 59.8
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.4e-86 323.6 343 52.5
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 4.0e-86 322.8 390 47.7
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.0e-84 318.2 406 45.3
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.3e-84 317.8 293 58.0
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.3e-84 317.8 351 52.1
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 2.2e-84 317.0 307 55.4
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 1.9e-83 313.9 432 47.2
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 1.6e-82 310.8 283 58.3
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 7.9e-82 308.5 388 45.9
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 3.0e-81 306.6 397 46.3
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 5.1e-81 305.8 255 59.6
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 8.7e-81 305.1 370 48.4
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 8.7e-81 305.1 386 45.6
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 1.5e-80 304.3 314 53.5
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 1.5e-80 304.3 365 47.4
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.9e-80 303.9 293 56.0
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 3.7e-79 299.7 283 56.2
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 3.7e-79 299.7 283 56.2
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 8.2e-79 298.5 285 56.5
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 3.1e-78 296.6 414 45.7
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 4.1e-78 296.2 314 53.5
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.2e-77 294.7 298 53.4
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.0e-77 293.9 303 54.5
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 2.0e-77 293.9 235 62.6
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 2.6e-77 293.5 283 55.8
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.6e-77 293.5 331 51.7
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 3.4e-77 293.1 303 54.8
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 3.8e-76 289.7 243 61.3
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 8.5e-76 288.5 283 56.9
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 8.5e-76 288.5 283 56.2
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 2.5e-75 287.0 425 42.6
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 4.2e-75 286.2 281 53.7
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 4.2e-75 286.2 288 54.9
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 5.5e-75 285.8 283 55.8
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 5.5e-75 285.8 283 55.8
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 7.2e-75 285.4 293 51.9
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 9.4e-75 285.0 293 52.2
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 2.1e-74 283.9 242 61.2
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 6.1e-74 282.3 370 47.3
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 7.9e-74 282.0 381 45.9
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 3.0e-73 280.0 252 57.9
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 6.7e-73 278.9 286 52.8
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.5e-72 277.7 240 58.8
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 5.7e-72 275.8 286 52.4
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 5.7e-72 275.8 309 49.5
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 9.7e-72 275.0 345 47.2
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 1.3e-71 274.6 286 52.4
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.7e-71 274.2 259 56.8
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 2.8e-71 273.5 254 56.7
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 3.7e-71 273.1 260 54.6
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 3.7e-71 273.1 399 43.9
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 8.2e-71 271.9 260 54.2
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 8.2e-71 271.9 253 55.7
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 9.1e-70 268.5 289 50.5
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 3.8e-68 263.1 252 56.3
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.1e-67 261.5 330 47.9
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 2.5e-67 260.4 254 56.3
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 4.2e-67 259.6 314 48.4
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.6e-66 257.7 353 42.5
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 3.9e-65 253.1 348 46.0
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.1e-64 251.5 241 54.8
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 1.5e-64 251.1 240 54.6
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 4.4e-64 249.6 258 54.3
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 5.7e-64 249.2 399 41.6
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 7.4e-64 248.8 257 54.1
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 1.7e-63 247.7 258 54.3
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 3.7e-63 246.5 257 53.3
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 3.7e-63 246.5 143 86.0
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 4.8e-63 246.1 246 54.9
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 1.1e-62 245.0 300 45.7
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 9.1e-62 241.9 484 35.1
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 7.7e-61 238.8 282 46.1
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 1.6e-58 231.1 195 62.1
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 1.6e-58 231.1 195 62.1
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 6.1e-58 229.2 282 45.0
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 1.4e-57 228.0 195 62.1
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 1.8e-57 227.6 219 58.0
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 2.3e-57 227.3 220 55.5
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 4.1e-54 216.5 412 37.4
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 5.3e-54 216.1 216 54.2
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 8.5e-52 208.8 340 41.8
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 7.2e-51 205.7 283 44.9
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 6.1e-50 202.6 284 43.0
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 6.1e-50 202.6 211 50.7
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.8e-49 201.1 241 46.5
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 4.8e-47 193.0 120 74.2
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 3.1e-46 190.3 122 68.9
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.6e-45 188.0 116 72.4
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 4.5e-45 186.4 119 71.4
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.7e-42 176.4 243 44.4
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.4e-40 169.9 322 35.7
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 8.3e-39 165.6 239 44.8
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 3.4e-32 143.7 261 34.5
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.2e-29 135.2 185 43.2
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.2e-29 135.2 185 43.2
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 4.6e-29 133.3 210 43.3
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 1.0e-25 122.1 114 50.9
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 2.6e-24 117.5 238 38.2
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 6.4e-23 112.8 138 48.6
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 6.2e-18 96.3 303 30.0


User provided reference genes

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