Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 1.6e-55 219.2 109 100.0
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 3.0e-46 188.3 98 94.9
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 8.5e-33 143.7 110 70.9
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 1.1e-32 143.3 109 67.9
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 4.2e-32 141.4 107 66.4
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 7.2e-32 140.6 79 83.5
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 9.4e-32 140.2 107 69.2
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 2.7e-31 138.7 106 71.7
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 3.6e-31 138.3 108 69.4
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 6.1e-31 137.5 107 66.4
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 8.0e-31 137.1 68 89.7
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.0e-30 136.7 115 66.1
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.0e-30 136.7 108 68.5
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.3e-30 135.6 115 66.1
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 3.0e-30 135.2 115 66.1
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 4.0e-30 134.8 109 63.3
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 5.2e-30 134.4 95 69.5
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 6.8e-30 134.0 69 88.4
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 6.8e-30 134.0 75 86.7
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 1.5e-29 132.9 106 66.0
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 1.5e-29 132.9 75 84.0
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 1.5e-29 132.9 75 85.3
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 2.0e-29 132.5 121 57.0
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.0e-29 132.5 79 78.5
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 2.6e-29 132.1 105 66.7
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 2.6e-29 132.1 79 73.4
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 3.4e-29 131.7 77 79.2
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 3.4e-29 131.7 73 84.9
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 4.4e-29 131.3 108 66.7
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 4.4e-29 131.3 79 77.2
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 4.4e-29 131.3 98 69.4
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 5.7e-29 131.0 77 76.6
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 5.7e-29 131.0 103 68.0
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 5.7e-29 131.0 93 69.9
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 5.7e-29 131.0 73 83.6
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 7.5e-29 130.6 96 66.7
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 7.5e-29 130.6 69 85.5
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 9.8e-29 130.2 106 64.2
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 9.8e-29 130.2 96 68.8
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 9.8e-29 130.2 70 82.9
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 1.3e-28 129.8 79 75.9
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.3e-28 129.8 73 82.2
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 1.3e-28 129.8 73 83.6
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 1.3e-28 129.8 70 82.9
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 1.3e-28 129.8 79 73.4
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.7e-28 129.4 105 61.9
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 1.7e-28 129.4 75 82.7
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 1.7e-28 129.4 75 82.7
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 1.7e-28 129.4 101 66.3
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 2.2e-28 129.0 93 71.0
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 2.8e-28 128.6 62 93.5
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 2.8e-28 128.6 65 89.2
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 2.8e-28 128.6 69 85.5
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 2.8e-28 128.6 106 61.3
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 3.7e-28 128.3 105 62.9
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 3.7e-28 128.3 106 63.2
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 3.7e-28 128.3 96 65.6
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 4.8e-28 127.9 84 71.4
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 6.3e-28 127.5 85 69.4
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 8.3e-28 127.1 106 60.4
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.3e-28 127.1 106 63.2
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.3e-28 127.1 73 79.5
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.3e-28 127.1 73 79.5
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.3e-28 127.1 106 63.2
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 8.3e-28 127.1 99 65.7
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 1.1e-27 126.7 71 83.1
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 1.1e-27 126.7 110 60.0
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 2.4e-27 125.6 88 69.3
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 3.1e-27 125.2 71 81.7
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 3.1e-27 125.2 82 70.7
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 5.4e-27 124.4 114 57.9
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 9.1e-27 123.6 98 64.3
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.2e-26 123.2 106 60.4
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 2.0e-26 122.5 73 79.5
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 2.0e-26 122.5 83 68.7
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 2.7e-26 122.1 72 80.6
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 2.7e-26 122.1 86 68.6
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 2.7e-26 122.1 145 50.3
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 3.5e-26 121.7 106 62.3
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 3.5e-26 121.7 105 61.9
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 3.5e-26 121.7 72 79.2
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 4.5e-26 121.3 106 60.4
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 5.9e-26 120.9 77 75.3
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 7.7e-26 120.6 81 69.1
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 1.0e-25 120.2 104 61.5
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 1.0e-25 120.2 62 85.5
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.0e-25 120.2 108 59.3
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 1.3e-25 119.8 71 78.9
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 1.3e-25 119.8 71 78.9
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 1.3e-25 119.8 71 78.9
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 1.7e-25 119.4 64 81.2
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 2.9e-25 118.6 110 60.9
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 2.9e-25 118.6 110 60.0
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 3.8e-25 118.2 63 84.1
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 3.8e-25 118.2 82 73.2
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 6.5e-25 117.5 110 60.0
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.2e-23 113.2 80 68.8
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.6e-23 112.8 80 68.8
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 2.3e-22 109.0 70 74.3
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 5.2e-22 107.8 86 59.3
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 1.5e-21 106.3 70 70.0
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 9.8e-21 103.6 78 64.1
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 8.3e-20 100.5 83 62.7
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 1.7e-12 76.3 43 79.1
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 1.1e-11 73.6 81 45.7
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 3.2e-11 72.0 89 47.2
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 3.0e-09 65.5 75 58.7
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 3.9e-09 65.1 93 48.4
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 1.2e-07 60.1 40 75.0
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 2.1e-07 59.3 70 48.6
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 2.3e-06 55.8 74 48.6


User provided reference genes

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