Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0387 Papaver somniferum HOM05D001528 ORTHO05D002760 2.8e-115 418.7 221 100.0
PSO017G7096 Papaver somniferum HOM05D001528 ORTHO05D002760 2.4e-10 70.1 78 44.9
Actinidia03036 Actinidia chinensis HOM05D001528 ORTHO05D002760 2.1e-09 67.0 111 36.0
Zm00001eb163160 Zea mays HOM05D001528 ORTHO05D002760 2.7e-09 66.6 99 35.4
Zm00001eb355110 Zea mays HOM05D001528 ORTHO05D002760 1.0e-08 64.7 120 34.2
Ciclev10031116m.g Citrus clementina HOM05D001528 ORTHO05D002760 1.3e-08 64.3 85 40.0
ECA233G6159 Erigeron canadensis HOM05D001528 ORTHO05D002760 1.3e-08 64.3 85 42.4
Os05g0125000 Oryza sativa ssp. japonica HOM05D001528 ORTHO05D002760 1.3e-08 64.3 111 35.1
Sed0027820 Sechium edule HOM05D001528 ORTHO05D002760 1.3e-08 64.3 116 32.8
Nn2g10697 Nelumbo nucifera HOM05D001528 ORTHO05D002760 1.7e-08 63.9 84 40.5
SalBow3G4476 Salvia bowleyana HOM05D001528 ORTHO05D002760 1.7e-08 63.9 82 40.2
SMO115G0269 Selaginella moellendorffii HOM05D001528 ORTHO05D002760 1.7e-08 63.9 101 35.6
Sc20g0002000 Simmondsia chinensis HOM05D001528 ORTHO05D002760 1.7e-08 63.9 140 30.7
Potri.004G210200 Populus trichocarpa HOM05D001528 ORTHO05D002760 2.3e-08 63.5 89 39.3
Zm00001eb265410 Zea mays HOM05D001528 ORTHO05D002760 2.3e-08 63.5 127 33.1
Manes.11G142100 Manihot esculenta HOM05D001528 ORTHO05D002760 3.0e-08 63.2 89 39.3
Os03g0719100 Oryza sativa ssp. japonica HOM05D001528 ORTHO05D002760 3.0e-08 63.2 99 37.4
HanXRQChr02g0055901 Helianthus annuus HOM05D001528 ORTHO05D002760 3.9e-08 62.8 127 33.9
PGR119G1340 Punica granatum HOM05D001528 ORTHO05D002760 3.9e-08 62.8 85 40.0
CDE09G0084 Ceratophyllum demersum HOM05D001528 ORTHO05D002760 5.1e-08 62.4 84 40.5
Potri.009G015000 Populus trichocarpa HOM05D001528 ORTHO05D002760 5.1e-08 62.4 140 30.0
Actinidia24484 Actinidia chinensis HOM05D001528 ORTHO05D002760 6.6e-08 62.0 132 32.6
Nn2g13025 Nelumbo nucifera HOM05D001528 ORTHO05D002760 6.6e-08 62.0 84 40.5
Sp5g16000 Schrenkiella parvula HOM05D001528 ORTHO05D002760 6.6e-08 62.0 106 34.9
SEGI_19017 Sequoiadendron giganteum HOM05D001528 ORTHO05D002760 6.6e-08 62.0 80 37.5
Thecc.09G259200 Theobroma cacao HOM05D001528 ORTHO05D002760 6.6e-08 62.0 127 32.3
MBI05_g31460_MAGBIO Magnolia biondii HOM05D001528 ORTHO05D002760 8.6e-08 61.6 84 39.3
CSS0006864 Camellia sinensis var. sinensis HOM05D001528 ORTHO05D002760 1.1e-07 61.2 102 36.3
ECA248G0966 Erigeron canadensis HOM05D001528 ORTHO05D002760 1.1e-07 61.2 84 40.5
HPP92_019465 Vanilla planifolia HOM05D001528 ORTHO05D002760 1.1e-07 61.2 84 40.5
Aa31LG5G7750 Aethionema arabicum HOM05D001528 ORTHO05D002760 1.5e-07 60.8 80 40.0
Cc01_g11440 Coffea canephora HOM05D001528 ORTHO05D002760 1.5e-07 60.8 131 32.1
Hma1.2p1_0568F.1_g180120 Hydrangea macrophylla HOM05D001528 ORTHO05D002760 1.5e-07 60.8 132 31.8
Lalb_Chr24g0394471 Lupinus albus HOM05D001528 ORTHO05D002760 1.5e-07 60.8 85 38.8
Manes.04G024600 Manihot esculenta HOM05D001528 ORTHO05D002760 1.5e-07 60.8 89 37.1
Thecc.10G069900 Theobroma cacao HOM05D001528 ORTHO05D002760 1.5e-07 60.8 111 36.0
Eucgr.B02478 Eucalyptus grandis HOM05D001528 ORTHO05D002760 1.9e-07 60.5 89 38.2
TAR636G1502 Trochodendron aralioides HOM05D001528 ORTHO05D002760 1.9e-07 60.5 133 32.3
MSTRG.12325 Avicennia marina HOM05D001528 ORTHO05D002760 2.5e-07 60.1 112 36.6
CDE07G0821 Ceratophyllum demersum HOM05D001528 ORTHO05D002760 2.5e-07 60.1 118 34.7
ATR0314G036 Amborella trichopoda HOM05D001528 ORTHO05D002760 3.3e-07 59.7 84 40.5
Dinv35726 Davidia involucrata HOM05D001528 ORTHO05D002760 3.3e-07 59.7 116 31.9
ECA233G3194 Erigeron canadensis HOM05D001528 ORTHO05D002760 3.3e-07 59.7 132 34.8
MBI05_g11572_MAGBIO Magnolia biondii HOM05D001528 ORTHO05D002760 4.3e-07 59.3 84 39.3
TAR633G2599 Trochodendron aralioides HOM05D001528 ORTHO05D002760 4.3e-07 59.3 84 38.1
vmacro04097 Vaccinium macrocarpon HOM05D001528 ORTHO05D002760 4.3e-07 59.3 121 33.1
CSS0044348 Camellia sinensis var. sinensis HOM05D001528 ORTHO05D002760 5.6e-07 58.9 136 31.6
Hma1.2p1_0071F.1_g038120 Hydrangea macrophylla HOM05D001528 ORTHO05D002760 5.6e-07 58.9 82 40.2
Mapoly0060s0062 Marchantia polymorpha HOM05D001528 ORTHO05D002760 5.6e-07 58.9 129 31.0
Phvul.005G137000 Phaseolus vulgaris HOM05D001528 ORTHO05D002760 5.6e-07 58.9 116 30.2
RcHm_v2.0_Chr1g0363931 Rosa chinensis HOM05D001528 ORTHO05D002760 5.6e-07 58.9 83 38.6
GSVIVG01025151001 Vitis vinifera HOM05D001528 ORTHO05D002760 5.6e-07 58.9 85 37.6
Atru.chr12.708 Acer truncatum HOM05D001528 ORTHO05D002760 9.6e-07 58.2 83 39.8
Atru.chr12.719 Acer truncatum HOM05D001528 ORTHO05D002760 9.6e-07 58.2 83 39.8
CiPaw.01G275100 Carya illinoinensis HOM05D001528 ORTHO05D002760 9.6e-07 58.2 83 38.6
Duzib150G0353 Durio zibethinus HOM05D001528 ORTHO05D002760 9.6e-07 58.2 84 38.1
Migut.N02613 Erythranthe guttata HOM05D001528 ORTHO05D002760 9.6e-07 58.2 84 39.3
Sabra08G0029100 Salix brachista HOM05D001528 ORTHO05D002760 9.6e-07 58.2 87 35.6
unitig_747.g22006 Utricularia gibba HOM05D001528 ORTHO05D002760 9.6e-07 58.2 81 38.3
FvH4_7g19970 Fragaria vesca HOM05D001528 ORTHO05D002760 1.2e-06 57.8 83 36.1
FAN03G0078 Fragaria x ananassa HOM05D001528 ORTHO05D002760 1.2e-06 57.8 83 36.1
Oeu002457.1 Olea europaea HOM05D001528 ORTHO05D002760 1.2e-06 57.8 87 37.9
Potri.008G042300 Populus trichocarpa HOM05D001528 ORTHO05D002760 1.2e-06 57.8 83 36.1
MD01G1111200 Malus domestica HOM05D001528 ORTHO05D002760 1.6e-06 57.4 83 39.8
Psat5g277360 Pisum sativum HOM05D001528 ORTHO05D002760 1.6e-06 57.4 128 30.5
SalBow3G3621 Salvia bowleyana HOM05D001528 ORTHO05D002760 2.8e-06 56.6 84 38.1
Ah.16g108440 Amaranthus hybridus HOM05D001528 ORTHO05D002760 3.6e-06 56.2 85 35.3
Pp3c20_14150 Physcomitrium patens HOM05D001528 ORTHO05D002760 4.7e-06 55.8 84 36.9
Pp3c20_14153 Physcomitrium patens HOM05D001528 ORTHO05D002760 4.7e-06 55.8 84 36.9
Prupe.2G216700 Prunus persica HOM05D001528 ORTHO05D002760 6.2e-06 55.5 83 37.3


User provided reference genes

Program Settings