Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 2.7e-85 318.5 150 100.0
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 1.4e-73 279.6 153 91.5
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 5.6e-43 177.9 118 71.2
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 8.1e-42 174.1 124 64.5
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 3.1e-41 172.2 148 58.1
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 1.2e-40 170.2 95 76.8
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 2.6e-40 169.1 118 67.8
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 3.4e-40 168.7 124 65.3
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 9.9e-40 167.2 107 71.0
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 1.3e-39 166.8 129 62.0
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 1.7e-39 166.4 151 56.3
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 1.7e-39 166.4 134 61.2
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 1.7e-39 166.4 121 67.8
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 3.8e-39 165.2 126 65.1
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 4.9e-39 164.9 138 60.9
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 6.4e-39 164.5 101 72.3
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 8.4e-39 164.1 103 69.9
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 8.4e-39 164.1 79 88.6
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 1.1e-38 163.7 107 69.2
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 1.4e-38 163.3 79 87.3
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 1.4e-38 163.3 109 69.7
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 1.4e-38 163.3 112 67.9
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 1.4e-38 163.3 112 67.9
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 1.4e-38 163.3 99 72.7
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 2.4e-38 162.5 135 59.3
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 2.4e-38 162.5 112 69.6
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 3.2e-38 162.2 79 86.1
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 3.2e-38 162.2 94 75.5
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 3.2e-38 162.2 109 68.8
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 3.2e-38 162.2 79 86.1
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 4.2e-38 161.8 132 62.1
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 5.4e-38 161.4 142 58.5
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 7.1e-38 161.0 99 72.7
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 7.1e-38 161.0 79 84.8
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 7.1e-38 161.0 130 60.0
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 7.1e-38 161.0 99 73.7
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 7.1e-38 161.0 109 67.9
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 9.3e-38 160.6 113 65.5
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 9.3e-38 160.6 130 63.1
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 1.2e-37 160.2 79 87.3
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 1.2e-37 160.2 79 84.8
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 1.6e-37 159.8 124 58.1
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 2.1e-37 159.5 79 86.1
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 2.1e-37 159.5 79 84.8
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 2.7e-37 159.1 88 77.3
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 2.7e-37 159.1 88 77.3
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 3.5e-37 158.7 79 83.5
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 4.6e-37 158.3 79 84.8
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 4.6e-37 158.3 79 84.8
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 4.6e-37 158.3 99 70.7
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 6.0e-37 157.9 79 83.5
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 6.0e-37 157.9 144 54.2
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 7.9e-37 157.5 101 70.3
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 7.9e-37 157.5 88 76.1
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 7.9e-37 157.5 79 84.8
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 1.0e-36 157.1 79 83.5
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 1.0e-36 157.1 79 82.3
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 1.3e-36 156.8 79 83.5
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 1.8e-36 156.4 128 59.4
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 5.1e-36 154.8 79 83.5
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 1.1e-35 153.7 78 82.1
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 1.1e-35 153.7 79 81.0
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 1.1e-35 153.7 79 81.0
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 1.1e-35 153.7 79 82.3
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 1.1e-35 153.7 114 61.4
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 1.5e-35 153.3 85 76.5
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 1.5e-35 153.3 92 71.7
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 2.5e-35 152.5 100 70.0
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 9.6e-35 150.6 79 79.7
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 1.6e-34 149.8 79 81.0
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 3.7e-34 148.7 86 74.4
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 1.1e-33 147.1 150 52.7
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 1.8e-33 146.4 102 65.7
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 9.0e-33 144.1 79 74.7
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 2.6e-32 142.5 107 61.7
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 2.6e-32 142.5 79 75.9
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 3.4e-32 142.1 79 75.9
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 5.8e-32 141.4 72 81.9
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 6.4e-31 137.9 76 75.0
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 1.2e-29 133.7 79 72.2
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 1.6e-29 133.3 87 64.4
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 6.0e-29 131.3 78 73.1
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 7.9e-29 131.0 122 50.8
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 6.7e-28 127.9 156 43.6
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 8.7e-28 127.5 157 43.3
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 7.4e-27 124.4 178 41.6
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 2.1e-21 106.3 55 78.2
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 4.6e-21 105.1 51 88.2
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 2.3e-20 102.8 51 84.3
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 3.0e-20 102.4 51 82.4
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 3.9e-20 102.1 52 84.6
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 3.8e-15 85.5 79 53.2
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 8.8e-12 74.3 91 40.7
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 1.3e-10 70.5 84 50.0
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 1.3e-10 70.5 83 42.2
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 3.7e-10 68.9 80 38.8
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 3.7e-10 68.9 81 39.5
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 4.8e-10 68.6 89 36.0
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.1e-09 67.4 89 36.0
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 1.1e-09 67.4 83 38.6
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 1.8e-09 66.6 88 36.4
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 1.8e-09 66.6 34 73.5
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 1.8e-09 66.6 82 39.0
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 2.4e-09 66.2 89 34.8
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 3.1e-09 65.9 77 39.0
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 3.1e-09 65.9 78 38.5
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 3.1e-09 65.9 88 36.4
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 4.1e-09 65.5 77 39.0
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 5.3e-09 65.1 100 36.0
MELO3C020311.2 Cucumis melo HOM05D007646 ORTHO05D004022 5.3e-09 65.1 55 56.4
Nn6g33555 Nelumbo nucifera HOM05D007710 ORTHO05D004022 5.3e-09 65.1 90 33.3
Aqoxy3G02299 Aquilegia oxysepala HOM05D007710 ORTHO05D004022 6.9e-09 64.7 78 38.5
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 6.9e-09 64.7 78 38.5
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 6.9e-09 64.7 89 36.0
HanXRQChr04g0105361 Helianthus annuus HOM05D007710 ORTHO05D004022 6.9e-09 64.7 84 38.1
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 6.9e-09 64.7 84 39.3
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 9.1e-09 64.3 88 34.1
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 9.1e-09 64.3 88 34.1
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 9.1e-09 64.3 89 37.1
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 9.1e-09 64.3 78 38.5
Cre13.g605700 Chlamydomonas reinhardtii HOM05D007646 ORTHO05D004022 1.2e-08 63.9 119 29.4
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 1.5e-08 63.5 77 37.7
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 1.5e-08 63.5 85 37.6
BolC6t38987H Brassica oleracea HOM05D007710 ORTHO05D004022 2.0e-08 63.2 84 39.3
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 2.0e-08 63.2 78 35.9
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 2.0e-08 63.2 77 39.0
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 2.0e-08 63.2 77 36.4
arahy.Tifrunner.gnm1.ann1.GY8AT6 Arachis hypogaea HOM05D007710 ORTHO05D004022 2.6e-08 62.8 77 39.0
arahy.Tifrunner.gnm1.ann1.U0IDC3 Arachis hypogaea HOM05D007710 ORTHO05D004022 2.6e-08 62.8 77 39.0
CAN.G1131.30 Capsicum annuum HOM05D007710 ORTHO05D004022 3.4e-08 62.4 85 34.1
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 3.4e-08 62.4 91 36.3
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 3.4e-08 62.4 78 38.5
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 3.4e-08 62.4 87 34.5
FAN03G2015 Fragaria x ananassa HOM05D007710 ORTHO05D004022 4.5e-08 62.0 89 36.0
Lj3g0011322 Lotus japonicus HOM05D007710 ORTHO05D004022 5.9e-08 61.6 77 39.0
ATR0057G097 Amborella trichopoda HOM05D007710 ORTHO05D004022 7.7e-08 61.2 90 35.6
unitig_748.g8495 Utricularia gibba HOM05D007646 ORTHO05D004022 7.7e-08 61.2 35 71.4
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 1.0e-07 60.8 77 35.1
CARHR056450 Cardamine hirsuta HOM05D007710 ORTHO05D004022 1.0e-07 60.8 85 31.8
Phvul.011G019000 Phaseolus vulgaris HOM05D007710 ORTHO05D004022 1.0e-07 60.8 77 36.4
Hund09805 Selenicereus undatus HOM05D007710 ORTHO05D004022 1.0e-07 60.8 77 39.0
TWI32G0404 Tripterygium wilfordii HOM05D007710 ORTHO05D004022 1.0e-07 60.8 77 37.7
GSVIVG01024345001 Vitis vinifera HOM05D007710 ORTHO05D004022 1.0e-07 60.8 77 36.4
AL2G19620 Arabidopsis lyrata HOM05D007710 ORTHO05D004022 1.3e-07 60.5 82 35.4
THA.LOC104805715 Tarenaya hassleriana HOM05D007710 ORTHO05D004022 1.3e-07 60.5 77 36.4
Peaxi162Scf00516g00641 Petunia axillaris HOM05D007710 ORTHO05D004022 1.7e-07 60.1 84 32.1
Potri.013G078866 Populus trichocarpa HOM05D007710 ORTHO05D004022 1.7e-07 60.1 78 39.7
PGSC0003DMG400003164 Solanum tuberosum HOM05D007710 ORTHO05D004022 2.2e-07 59.7 77 37.7
PGSC0003DMG402026486 Solanum tuberosum HOM05D007710 ORTHO05D004022 2.2e-07 59.7 77 37.7
TPR.G19627 Trifolium pratense HOM05D007710 ORTHO05D004022 2.2e-07 59.7 84 32.1
Duzib128G0150 Durio zibethinus HOM05D007710 ORTHO05D004022 2.9e-07 59.3 81 35.8
Atru.chr12.1914 Acer truncatum HOM05D007710 ORTHO05D004022 3.8e-07 58.9 87 33.3
C06p38950 Brassica napus HOM05D007710 ORTHO05D004022 3.8e-07 58.9 84 36.9
CARHR057330 Cardamine hirsuta HOM05D007710 ORTHO05D004022 5.0e-07 58.5 85 31.8
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 5.0e-07 58.5 77 36.4
FAN10G2135 Fragaria x ananassa HOM05D003442 ORTHO05D004005 6.5e-07 58.2 132 27.3
Solyc03g097200.3 Solanum lycopersicum HOM05D007710 ORTHO05D004022 6.5e-07 58.2 77 36.4
Sopen03g027960 Solanum pennellii HOM05D007710 ORTHO05D004022 6.5e-07 58.2 77 36.4
HPP92_014617 Vanilla planifolia HOM05D007710 ORTHO05D004022 6.5e-07 58.2 88 31.8
AT1G65000 Arabidopsis thaliana HOM05D007710 ORTHO05D004022 8.5e-07 57.8 82 34.1
Medtr4g478210 Medicago truncatula HOM05D007710 ORTHO05D004022 8.5e-07 57.8 77 35.1
Mapoly0120s0048 Marchantia polymorpha HOM05D007710 ORTHO05D004022 1.1e-06 57.4 77 35.1
Gohir.A13G101700 Gossypium hirsutum HOM05D007710 ORTHO05D004022 1.4e-06 57.0 81 34.6
MD01G1238100 Malus domestica HOM05D007710 ORTHO05D004022 3.2e-06 55.8 77 35.1
Ciclev10033194m.g Citrus clementina HOM05D007710 ORTHO05D004022 4.2e-06 55.5 87 32.2
Sed0013213 Sechium edule HOM05D007710 ORTHO05D004022 4.2e-06 55.5 82 34.1
Migut.F00935 Erythranthe guttata HOM05D007710 ORTHO05D004022 5.5e-06 55.1 79 35.4
Psat7g170120 Pisum sativum HOM05D007710 ORTHO05D004022 5.5e-06 55.1 77 33.8
MD01G1238400 Malus domestica HOM05D007710 ORTHO05D004022 7.2e-06 54.7 77 35.1


User provided reference genes

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