Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0331 Papaver somniferum HOM05D005135 ORTHO05D005810 3.5e-122 441.8 251 100.0
PSO782G0956 Papaver somniferum HOM05D005135 ORTHO05D005810 8.9e-118 427.2 251 92.0
Aqoxy7G00498 Aquilegia oxysepala HOM05D005135 ORTHO05D005810 3.0e-73 279.3 248 64.5
TAR629G2517 Trochodendron aralioides HOM05D005135 ORTHO05D005810 6.7e-73 278.1 258 67.1
Actinidia31800 Actinidia chinensis HOM05D005135 ORTHO05D005810 1.1e-72 277.3 250 66.0
Hma1.2p1_0488F.1_g163940 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 1.9e-72 276.6 253 63.6
Nn1g01287 Nelumbo nucifera HOM05D005135 ORTHO05D005810 1.9e-72 276.6 254 61.4
Eucgr.K00188 Eucalyptus grandis HOM05D005135 ORTHO05D005810 4.3e-72 275.4 252 64.3
vmacro09870 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 2.8e-71 272.7 249 63.1
GSVIVG01018448001 Vitis vinifera HOM05D005135 ORTHO05D005810 2.8e-71 272.7 258 62.8
CiPaw.03G100200 Carya illinoinensis HOM05D005135 ORTHO05D005810 1.1e-70 270.8 251 64.1
Duzib068G0893 Durio zibethinus HOM05D005135 ORTHO05D005810 3.1e-70 269.2 258 62.0
Glyma.10G240700 Glycine max HOM05D005135 ORTHO05D005810 3.1e-70 269.2 256 61.3
Oeu022533.1 Olea europaea HOM05D005135 ORTHO05D005810 3.1e-70 269.2 247 62.8
Dinv35139 Davidia involucrata HOM05D005135 ORTHO05D005810 4.1e-70 268.9 253 63.2
CSS0048110 Camellia sinensis var. sinensis HOM05D005135 ORTHO05D005810 6.9e-70 268.1 247 64.0
Thecc.03G166900 Theobroma cacao HOM05D005135 ORTHO05D005810 6.9e-70 268.1 257 61.1
Potri.015G135000 Populus trichocarpa HOM05D005135 ORTHO05D005810 9.0e-70 267.7 250 64.8
VMungo0720G1039 Vigna mungo HOM05D005135 ORTHO05D005810 2.6e-69 266.2 256 60.2
Phvul.007G065300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 3.4e-69 265.8 256 60.5
Manes.14G031000 Manihot esculenta HOM05D005135 ORTHO05D005810 4.5e-69 265.4 252 62.7
FAN01G0847 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.3e-68 263.8 252 63.5
Migut.F01160 Erythranthe guttata HOM05D005135 ORTHO05D005810 5.0e-68 261.9 249 63.9
MSTRG.8780 Avicennia marina HOM05D005135 ORTHO05D005810 1.4e-67 260.4 246 63.8
Duzib084G0614 Durio zibethinus HOM05D005135 ORTHO05D005810 1.4e-67 260.4 257 58.8
EL10Ac3g05742 Beta vulgaris HOM05D005135 ORTHO05D005810 7.2e-67 258.1 257 62.6
unitig_52.g17751 Utricularia gibba HOM05D005135 ORTHO05D005810 9.3e-67 257.7 247 62.3
Nitab4.5_0000205g0180 Nicotiana tabacum HOM05D005135 ORTHO05D005810 1.6e-66 256.9 253 63.2
Glyma.20G154000 Glycine max HOM05D005135 ORTHO05D005810 2.7e-66 256.1 255 59.6
Oeu030142.1 Olea europaea HOM05D005135 ORTHO05D005810 2.7e-66 256.1 254 61.0
Sopen11g029970 Solanum pennellii HOM05D005135 ORTHO05D005810 4.6e-66 255.4 255 62.7
Ciclev10005677m.g Citrus clementina HOM05D005135 ORTHO05D005810 7.9e-66 254.6 261 63.6
ATR0661G043 Amborella trichopoda HOM05D005135 ORTHO05D005810 1.3e-65 253.8 258 60.1
Solyc11g072300.2 Solanum lycopersicum HOM05D005135 ORTHO05D005810 1.3e-65 253.8 254 62.6
BcaC01g06140 Brassica carinata HOM05D005135 ORTHO05D005810 2.3e-65 253.1 253 59.3
AUR62021268 Chenopodium quinoa HOM05D005135 ORTHO05D005810 2.3e-65 253.1 259 58.3
FAN03G3482 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.0e-65 252.7 254 62.6
C03p18840 Brassica napus HOM05D005135 ORTHO05D005810 6.7e-65 251.5 253 58.9
Solyc03g006850.3 Solanum lycopersicum HOM05D005135 ORTHO05D005810 6.7e-65 251.5 257 60.3
arahy.Tifrunner.gnm1.ann1.UR3NDK Arachis hypogaea HOM05D005135 ORTHO05D005810 8.7e-65 251.1 252 60.3
Sopen03g002840 Solanum pennellii HOM05D005135 ORTHO05D005810 8.7e-65 251.1 254 60.6
CDE07G1455 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 1.1e-64 250.8 262 58.0
Oeu030256.1 Olea europaea HOM05D005135 ORTHO05D005810 1.1e-64 250.8 248 61.7
FAN06G3133 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.5e-64 250.4 249 61.0
Peaxi162Scf00557g00212 Petunia axillaris HOM05D005135 ORTHO05D005810 1.5e-64 250.4 253 61.3
PGSC0003DMG400027379 Solanum tuberosum HOM05D005135 ORTHO05D005810 1.5e-64 250.4 249 62.2
CAN.G1187.4 Capsicum annuum HOM05D005135 ORTHO05D005810 1.9e-64 250.0 252 62.7
Lj5g0000742 Lotus japonicus HOM05D005135 ORTHO05D005810 1.9e-64 250.0 255 59.2
Sabra15G0147000 Salix brachista HOM05D005135 ORTHO05D005810 1.9e-64 250.0 277 58.1
Ah.07g208790 Amaranthus hybridus HOM05D005135 ORTHO05D005810 3.3e-64 249.2 258 59.3
FAN06G4903 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.3e-64 249.2 249 60.6
Gohir.D12G262900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 3.3e-64 249.2 257 58.0
Gorai.008G281800 Gossypium raimondii HOM05D005135 ORTHO05D005810 3.3e-64 249.2 260 57.3
arahy.Tifrunner.gnm1.ann1.3G6IEL Arachis hypogaea HOM05D005135 ORTHO05D005810 5.7e-64 248.4 252 59.5
Gohir.A12G262200 Gossypium hirsutum HOM05D005135 ORTHO05D005810 5.7e-64 248.4 260 57.3
A03p16010 Brassica napus HOM05D005135 ORTHO05D005810 7.4e-64 248.1 256 59.8
CAN.G1182.3 Capsicum annuum HOM05D005135 ORTHO05D005810 2.8e-63 246.1 250 61.6
BraA03t10892Z Brassica rapa HOM05D005135 ORTHO05D005810 4.8e-63 245.4 257 58.8
FAN10G2880 Fragaria x ananassa HOM05D005135 ORTHO05D005810 4.8e-63 245.4 287 55.1
Gohir.D08G104900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 4.8e-63 245.4 257 58.0
Lalb_Chr06g0160891 Lupinus albus HOM05D005135 ORTHO05D005810 4.8e-63 245.4 257 57.6
RcHm_v2.0_Chr1g0376221 Rosa chinensis HOM05D005135 ORTHO05D005810 6.3e-63 245.0 247 60.7
BolC3t14274H Brassica oleracea HOM05D005135 ORTHO05D005810 1.1e-62 244.2 259 58.3
FvH4_7g28720 Fragaria vesca HOM05D005135 ORTHO05D005810 3.1e-62 242.7 243 60.9
ClCG05G007690 Citrullus lanatus HOM05D005135 ORTHO05D005810 1.2e-61 240.7 257 56.4
BcaB08g35536 Brassica carinata HOM05D005135 ORTHO05D005810 2.0e-61 240.0 256 60.9
Sed0024541 Sechium edule HOM05D005135 ORTHO05D005810 2.6e-61 239.6 252 56.7
Carub.0008s1186 Capsella rubella HOM05D005135 ORTHO05D005810 4.5e-61 238.8 256 61.7
MD01G1193100 Malus domestica HOM05D005135 ORTHO05D005810 4.5e-61 238.8 245 60.8
ECA238G2105 Erigeron canadensis HOM05D005135 ORTHO05D005810 7.7e-61 238.0 247 58.3
MD00G1004200 Malus domestica HOM05D005135 ORTHO05D005810 7.7e-61 238.0 246 61.0
HPP92_001726 Vanilla planifolia HOM05D005135 ORTHO05D005810 7.7e-61 238.0 249 57.4
COL.COLO4_14228 Corchorus olitorius HOM05D005135 ORTHO05D005810 1.3e-60 237.3 257 56.0
BcaB01g04154 Brassica carinata HOM05D005135 ORTHO05D005810 1.7e-60 236.9 254 61.4
TWI23G0093 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 1.7e-60 236.9 249 57.8
Gohir.A08G093700 Gossypium hirsutum HOM05D005135 ORTHO05D005810 2.2e-60 236.5 258 58.1
Prupe.2G287200 Prunus persica HOM05D005135 ORTHO05D005810 2.2e-60 236.5 248 58.5
HPP92_001719 Vanilla planifolia HOM05D005135 ORTHO05D005810 2.2e-60 236.5 249 57.0
Sp6g14090 Schrenkiella parvula HOM05D005135 ORTHO05D005810 3.8e-60 235.7 253 59.7
TWI39G0390 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 3.8e-60 235.7 249 58.6
Ca_10813_v3 Cicer arietinum L. HOM05D005135 ORTHO05D005810 5.0e-60 235.3 258 56.6
Thhalv10014510m.g Eutrema salsugineum HOM05D005135 ORTHO05D005810 5.0e-60 235.3 253 60.5
SGA_v2.0_scaffold303G47872 Striga asiatica HOM05D005135 ORTHO05D005810 6.5e-60 235.0 306 51.0
MELO3C006858.2 Cucumis melo HOM05D005135 ORTHO05D005810 8.5e-60 234.6 257 55.6
Psat7g169320 Pisum sativum HOM05D005135 ORTHO05D005810 1.1e-59 234.2 248 58.1
HanXRQChr14g0461821 Helianthus annuus HOM05D005135 ORTHO05D005810 1.4e-59 233.8 245 60.0
Zm00001eb027200 Zea mays HOM05D005135 ORTHO05D005810 1.9e-59 233.4 248 56.9
Hund04685 Selenicereus undatus HOM05D005135 ORTHO05D005810 3.2e-59 232.6 250 57.2
Sc13g0008230 Simmondsia chinensis HOM05D005135 ORTHO05D005810 3.2e-59 232.6 249 58.2
Dinv28508 Davidia involucrata HOM05D005135 ORTHO05D005810 4.2e-59 232.3 151 81.5
Nitab4.5_0001573g0020 Nicotiana tabacum HOM05D005135 ORTHO05D005810 5.5e-59 231.9 247 59.1
Aa31LG3G8280 Aethionema arabicum HOM05D005135 ORTHO05D005810 9.4e-59 231.1 252 57.1
CARHR264720 Cardamine hirsuta HOM05D005135 ORTHO05D005810 9.4e-59 231.1 256 59.8
Rhsim09G0195100 Rhododendron simsii HOM05D000559 ORTHO05D005810 2.1e-58 229.9 227 60.8
CsaV3_3G016630 Cucumis sativus L. HOM05D005135 ORTHO05D005810 2.7e-58 229.6 257 54.9
Lj1A988G25 Lonicera japonica HOM05D005135 ORTHO05D005810 2.7e-58 229.6 224 63.4
vmacro06737 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 6.1e-58 228.4 154 77.9
AT5G51840 Arabidopsis thaliana HOM05D005135 ORTHO05D005810 7.9e-58 228.0 252 58.7
AL8G26130 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 2.3e-57 226.5 256 58.6
Medtr1g101945 Medicago truncatula HOM05D005135 ORTHO05D005810 3.0e-57 226.1 249 55.0
SGA_v2.0_scaffold10G05426 Striga asiatica HOM05D005135 ORTHO05D005810 5.1e-57 225.3 243 59.3
Gohir.D04G141600 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.1e-56 224.2 156 75.6
Lsat_1_v5_gn_2_130120 Lactuca sativa HOM05D005135 ORTHO05D005810 3.3e-56 222.6 258 56.2
VMungo0464G2082 Vigna mungo HOM05D000559 ORTHO05D005810 3.3e-56 222.6 259 56.0
FAN03G1115 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.7e-55 220.3 306 51.0
AUR62016060 Chenopodium quinoa HOM05D005135 ORTHO05D005810 2.8e-55 219.5 269 52.4
Rhsim03G0174700 Rhododendron simsii HOM05D000559 ORTHO05D000596 3.7e-55 219.2 254 57.1
PGR142G1544 Punica granatum HOM05D005135 ORTHO05D005810 2.4e-54 216.5 258 53.1
PGR042G3048 Punica granatum HOM05D005135 ORTHO05D005810 9.1e-54 214.5 153 75.2
Sed0023089 Sechium edule HOM05D005135 ORTHO05D005810 1.5e-53 213.8 255 52.2
Actinidia14214 Actinidia chinensis HOM05D005135 ORTHO05D005810 2.2e-52 209.9 205 63.4
DCAR_020208 Daucus carota HOM05D005135 ORTHO05D005810 3.2e-51 206.1 218 60.1
Cc02_g03590 Coffea canephora HOM05D005135 ORTHO05D005810 3.6e-50 202.6 256 53.1
TPR.G17397 Trifolium pratense HOM05D005135 ORTHO05D005810 2.6e-48 196.4 223 55.2
AagrBONN_evm.TU.Sc2ySwM_117.1266 Anthoceros agrestis HOM05D005135 ORTHO05D005810 1.2e-45 187.6 281 43.8
Glyma.16G200500 Glycine max HOM05D005135 ORTHO05D005810 2.9e-44 183.0 254 50.0
Mapoly0096s0072 Marchantia polymorpha HOM05D005135 ORTHO05D005810 5.5e-43 178.7 259 46.7
Lalb_Chr21g0304891 Lupinus albus HOM05D005135 ORTHO05D005810 6.3e-39 165.2 221 48.9
Pp3c13_17710 Physcomitrium patens HOM05D005135 ORTHO05D005810 1.1e-38 164.5 190 52.1
Phvul.004G123300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 4.7e-34 149.1 251 43.8
Lj8C32T8 Lonicera japonica HOM05D005135 ORTHO05D005810 6.8e-33 145.2 96 75.0
CDE04G3520 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 8.8e-33 144.8 149 58.4
Haze_13791 Corylus avellana HOM05D005135 ORTHO05D005810 2.8e-31 139.8 272 44.5
Actinidia03096 Actinidia chinensis HOM05D005135 ORTHO05D005810 1.4e-30 137.5 194 51.5
AL8G30000 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 1.4e-30 137.5 107 66.4
SHI13830 Sapria himalayana HOM05D005135 ORTHO05D005810 5.0e-28 129.0 199 43.7
PGSC0003DMG400024247 Solanum tuberosum HOM05D005135 ORTHO05D005810 8.5e-28 128.3 177 49.7
Potri.012G132832 Populus trichocarpa HOM05D005135 ORTHO05D005810 1.8e-25 120.6 181 48.6
Peaxi162Scf00192g00520 Petunia axillaris HOM05D005135 ORTHO05D005810 1.2e-24 117.9 207 46.4
Lj8A32T30 Lonicera japonica HOM05D005135 ORTHO05D005810 7.7e-21 105.1 177 47.5
Cre16.g661800 Chlamydomonas reinhardtii HOM05D005135 ORTHO05D005810 2.3e-20 103.6 126 48.4
Hund01499 Selenicereus undatus HOM05D000873 ORTHO05D005810 4.3e-19 99.4 101 59.4
Os10g0188400 Oryza sativa ssp. japonica HOM05D005135 ORTHO05D005810 1.6e-18 97.4 61 80.3
BcaC04g20628 Brassica carinata HOM05D005135 ORTHO05D005810 2.1e-18 97.1 224 42.4
SHI48584 Sapria himalayana HOM05D005135 ORTHO05D005810 2.9e-15 86.7 149 45.6
Potri.012G132766 Populus trichocarpa HOM05D005135 ORTHO05D005810 1.6e-13 80.9 55 72.7
TAR291G0007 Trochodendron aralioides HOM05D005135 ORTHO05D005810 2.7e-13 80.1 141 41.8
Hma1.2p1_3202F.1_g333920 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 3.0e-12 76.6 54 75.9
SMO201G0013 Selaginella moellendorffii HOM05D005135 ORTHO05D005810 5.0e-12 75.9 63 61.9
SEGI_16349 Sequoiadendron giganteum HOM05D056048 ORTHO05D005810 7.3e-11 72.0 173 36.4
CDE04G1613 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 3.1e-09 66.6 40 72.5
PRCOL_00003096 Prasinoderma coloniale HOM05D005135 ORTHO05D005810 4.1e-06 56.2 108 39.8


User provided reference genes

Program Settings