Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 0.0e+00 1161.0 612 100.0
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 1.0e-292 1009.6 610 87.2
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 1.2e-72 278.5 755 35.8
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 9.6e-41 172.6 470 33.6
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 6.5e-37 159.8 377 37.7
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 6.3e-32 143.3 269 38.3
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 6.3e-32 143.3 586 31.1
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 8.2e-32 142.9 269 38.3
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 4.2e-28 130.6 257 41.2
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 4.2e-28 130.6 257 41.2
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 6.7e-26 123.2 518 29.9
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 8.8e-26 122.9 279 36.6
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 4.3e-25 120.6 268 38.1
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 5.7e-25 120.2 223 40.8
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 1.7e-24 118.6 288 38.5
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 3.7e-24 117.5 259 37.1
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 3.7e-24 117.5 258 38.0
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 6.3e-24 116.7 308 35.1
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 1.4e-23 115.5 272 37.5
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 1.8e-23 115.2 331 33.8
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 2.4e-23 114.8 286 35.3
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 6.9e-23 113.2 347 34.0
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 9.1e-23 112.8 402 29.9
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 1.2e-22 112.5 237 35.9
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 2.0e-22 111.7 347 32.3
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 3.4e-22 110.9 388 30.4
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 3.4e-22 110.9 284 34.2
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 4.5e-22 110.5 379 31.1
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 5.9e-22 110.2 404 30.2
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.0e-21 109.4 511 27.8
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 1.3e-21 109.0 519 29.5
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 2.2e-21 108.2 271 33.2
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 2.2e-21 108.2 249 34.9
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 2.9e-21 107.8 258 37.6
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 5.0e-21 107.1 271 35.8
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 5.0e-21 107.1 275 33.1
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 8.5e-21 106.3 639 27.2
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 1.1e-20 105.9 314 32.8
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 1.9e-20 105.1 350 30.6
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 2.5e-20 104.8 374 31.3
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 4.2e-20 104.0 260 36.5
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 4.2e-20 104.0 392 33.2
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 7.2e-20 103.2 649 27.1
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 9.4e-20 102.8 373 29.8
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 9.4e-20 102.8 553 26.4
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 9.4e-20 102.8 264 36.4
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.2e-19 102.4 635 26.1
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 2.1e-19 101.7 393 33.6
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 2.7e-19 101.3 292 29.8
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 3.6e-19 100.9 379 28.8
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 3.6e-19 100.9 252 34.9
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 3.6e-19 100.9 317 34.7
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 3.6e-19 100.9 314 30.9
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 4.7e-19 100.5 329 36.2
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 7.9e-19 99.8 334 30.8
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 7.9e-19 99.8 201 37.8
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 1.4e-18 99.0 351 31.3
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 3.0e-18 97.8 268 31.7
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 8.8e-18 96.3 273 34.1
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 1.1e-17 95.9 246 36.2
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 1.1e-17 95.9 246 36.2
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 1.1e-17 95.9 300 35.0
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 1.5e-17 95.5 258 33.7
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 1.5e-17 95.5 421 27.6
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 2.6e-17 94.7 262 31.7
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 2.6e-17 94.7 324 31.5
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 7.4e-17 93.2 253 35.2
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 9.7e-17 92.8 238 35.7
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 1.8e-15 88.6 272 33.1
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 2.4e-15 88.2 350 28.6
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 4.1e-15 87.4 360 27.8
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 1.5e-14 85.5 255 34.1
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 1.3e-13 82.4 296 29.4
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 5.0e-13 80.5 310 31.0
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 8.5e-13 79.7 418 29.4
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 8.5e-13 79.7 229 31.9
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 1.9e-12 78.6 265 32.5
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 3.2e-12 77.8 259 33.2
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 4.2e-12 77.4 256 33.2
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 7.2e-12 76.6 250 31.2
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 7.2e-12 76.6 250 31.2
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 2.1e-11 75.1 269 31.2
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 3.6e-11 74.3 344 31.1
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 6.1e-11 73.6 333 30.0
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 8.0e-11 73.2 312 30.1
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 8.0e-11 73.2 262 31.7
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 1.8e-10 72.0 117 40.2
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 7.4e-09 66.6 487 25.7
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 3.7e-08 64.3 225 32.4
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 8.2e-08 63.2 333 26.1
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.1e-07 62.8 286 29.7
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 1.4e-07 62.4 226 30.1
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 1.8e-07 62.0 236 33.1
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 7.0e-07 60.1 275 29.8


User provided reference genes

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