Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 1.3e-37 159.1 72 100.0
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 1.3e-37 159.1 72 100.0
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 6.5e-29 130.2 70 81.4
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.1e-28 129.4 70 80.0
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 1.4e-28 129.0 69 84.1
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 1.4e-28 129.0 69 84.1
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 1.2e-27 125.9 71 74.6
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 4.6e-27 124.0 69 79.7
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 3.0e-26 121.3 69 76.8
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 5.1e-26 120.6 69 78.3
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 5.1e-26 120.6 69 76.8
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 6.7e-26 120.2 71 73.2
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 6.7e-26 120.2 69 73.9
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 6.7e-26 120.2 69 72.5
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.7e-26 120.2 63 79.4
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 6.7e-26 120.2 69 75.4
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 8.7e-26 119.8 69 72.5
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 8.7e-26 119.8 69 75.4
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 8.7e-26 119.8 69 75.4
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 8.7e-26 119.8 69 75.4
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.1e-25 119.4 69 73.9
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 1.5e-25 119.0 69 73.9
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 1.9e-25 118.6 68 70.6
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.5e-25 118.2 69 72.5
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 5.7e-25 117.1 69 71.0
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 5.7e-25 117.1 69 72.5
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 7.4e-25 116.7 69 73.9
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 7.4e-25 116.7 69 72.5
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 7.4e-25 116.7 69 71.0
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 9.6e-25 116.3 69 72.5
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.3e-24 115.9 69 71.0
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 1.3e-24 115.9 67 76.1
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 1.3e-24 115.9 69 71.0
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 1.3e-24 115.9 69 71.0
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 1.3e-24 115.9 69 71.0
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 1.3e-24 115.9 69 68.1
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.3e-24 115.9 69 72.5
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.6e-24 115.5 69 71.0
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 1.6e-24 115.5 69 69.6
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.6e-24 115.5 69 72.5
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.6e-24 115.5 69 72.5
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.1e-24 115.2 69 73.9
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 2.1e-24 115.2 66 77.3
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 2.1e-24 115.2 66 77.3
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 2.1e-24 115.2 66 77.3
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 2.1e-24 115.2 69 68.1
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 2.1e-24 115.2 66 77.3
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 2.1e-24 115.2 69 69.6
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.1e-24 115.2 69 71.0
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.1e-24 115.2 69 71.0
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.1e-24 115.2 69 71.0
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 73.9
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 73.9
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 73.9
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 73.9
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 73.9
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 71.0
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 71.0
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 73.9
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 72.5
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 72.5
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 72.5
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 72.5
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 68.1
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 71.0
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 69.6
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 69.6
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 4.8e-24 114.0 69 69.6
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 6.2e-24 113.6 69 71.0
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 6.2e-24 113.6 69 68.1
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 8.2e-24 113.2 69 69.6
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 8.2e-24 113.2 63 73.0
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 8.2e-24 113.2 69 66.7
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 8.2e-24 113.2 69 66.7
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 8.2e-24 113.2 69 66.7
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.1e-23 112.8 69 66.7
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.1e-23 112.8 69 71.0
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 1.1e-23 112.8 69 69.6
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 1.1e-23 112.8 69 66.7
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 1.4e-23 112.5 69 69.6
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 2.4e-23 111.7 69 69.6
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 2.4e-23 111.7 69 68.1
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 2.4e-23 111.7 69 66.7
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 3.1e-23 111.3 69 72.5
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.1e-23 111.3 69 69.6
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 3.1e-23 111.3 69 66.7
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 3.1e-23 111.3 69 66.7
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 4.0e-23 110.9 69 69.6
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 5.3e-23 110.5 69 72.5
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 5.3e-23 110.5 69 71.0
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 1.2e-22 109.4 69 68.1
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 1.5e-22 109.0 67 70.1
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.5e-22 109.0 69 65.2
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 2.0e-22 108.6 68 67.6
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 4.5e-22 107.5 69 62.3
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.0e-21 106.3 61 75.4
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.3e-21 105.9 69 62.3
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.3e-21 105.9 69 62.3
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.3e-21 105.9 69 62.3
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.7e-21 105.5 69 71.0
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 2.9e-21 104.8 62 69.4
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 2.9e-21 104.8 62 69.4
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.9e-21 104.8 69 62.3
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.8e-21 104.4 69 62.3
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.8e-21 104.4 69 63.8
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 8.4e-21 103.2 58 74.1
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.9e-20 102.1 69 59.4
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.9e-20 102.1 69 59.4
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.5e-20 101.7 69 66.7
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.5e-20 101.7 69 58.0
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.2e-20 101.3 69 60.9
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-20 100.9 69 59.4
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 9.3e-20 99.8 70 61.4
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.3e-18 95.9 67 55.2
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 4.3e-17 90.9 62 64.5
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.3e-16 89.4 61 63.9
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.3e-16 89.4 69 50.7
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.3e-16 89.4 69 49.3
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 6.9e-15 83.6 47 72.3
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 5.9e-14 80.5 58 62.1
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.2e-13 78.6 46 69.6
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 5.3e-07 57.4 72 41.7


User provided reference genes

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