Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 4.5e-147 524.6 274 100.0
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 2.5e-142 508.8 274 96.7
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 7.3e-89 331.3 266 70.7
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 2.3e-87 326.2 274 67.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 2.6e-86 322.8 241 72.6
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 2.6e-86 322.8 279 66.3
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 9.8e-86 320.9 276 67.0
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.3e-85 320.5 281 65.5
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.7e-85 320.1 247 70.9
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.7e-85 318.9 257 68.5
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 6.4e-85 318.2 280 67.1
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 1.4e-84 317.0 287 63.1
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.4e-84 317.0 216 77.8
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.4e-84 317.0 231 73.6
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 1.8e-84 316.6 271 65.7
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.2e-84 315.8 189 83.6
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 3.2e-84 315.8 283 63.6
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 4.1e-84 315.5 252 68.7
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 4.1e-84 315.5 287 65.2
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 5.4e-84 315.1 194 80.9
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 5.4e-84 315.1 280 63.6
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 5.4e-84 315.1 209 78.9
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 7.0e-84 314.7 245 69.4
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 2.0e-83 313.2 273 66.7
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 2.0e-83 313.2 287 63.4
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 2.0e-83 313.2 187 84.5
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 4.6e-83 312.0 283 67.5
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 5.9e-83 311.6 269 64.3
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 5.9e-83 311.6 266 65.8
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.0e-82 310.8 281 63.0
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.7e-82 310.1 238 69.3
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 2.3e-82 309.7 280 61.8
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 2.3e-82 309.7 194 80.4
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 3.0e-82 309.3 219 74.9
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 3.0e-82 309.3 187 84.5
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 3.9e-82 308.9 228 72.4
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 3.9e-82 308.9 241 70.1
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.9e-82 308.9 219 74.9
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 6.6e-82 308.1 267 64.0
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 6.6e-82 308.1 195 82.1
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 8.6e-82 307.8 273 64.8
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 8.6e-82 307.8 282 62.4
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.9e-81 306.6 287 61.0
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 1.9e-81 306.6 209 76.6
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 2.5e-81 306.2 272 63.6
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 2.5e-81 306.2 267 63.7
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 2.5e-81 306.2 267 63.7
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.5e-81 306.2 219 74.0
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 3.3e-81 305.8 271 65.7
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 3.3e-81 305.8 281 61.2
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 3.3e-81 305.8 279 62.7
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 3.3e-81 305.8 268 64.6
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 4.3e-81 305.4 267 62.9
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 4.3e-81 305.4 226 70.8
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 4.3e-81 305.4 268 62.7
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 5.6e-81 305.1 272 64.3
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 5.6e-81 305.1 192 81.8
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 9.5e-81 304.3 276 67.0
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 9.5e-81 304.3 269 62.1
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 1.6e-80 303.5 268 66.0
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.6e-80 303.5 246 68.3
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 2.1e-80 303.1 202 77.7
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 2.1e-80 303.1 188 80.3
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 2.8e-80 302.8 267 62.9
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.8e-80 302.8 198 78.3
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 3.6e-80 302.4 193 80.8
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 3.6e-80 302.4 282 62.1
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 4.7e-80 302.0 196 80.1
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 6.2e-80 301.6 248 67.3
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 8.0e-80 301.2 255 64.3
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.4e-79 300.4 289 60.6
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.4e-79 300.4 276 63.4
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.8e-79 300.1 283 61.8
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.3e-79 299.7 283 61.5
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.3e-79 299.7 186 83.3
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 5.2e-79 298.5 193 80.8
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.8e-79 298.1 283 61.5
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 6.8e-79 298.1 208 74.5
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 8.9e-79 297.7 266 62.4
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 8.9e-79 297.7 268 64.9
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.2e-78 297.4 193 79.3
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 1.2e-78 297.4 192 80.2
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.2e-78 297.4 196 78.1
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.5e-78 297.0 229 69.0
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 2.0e-78 296.6 263 61.6
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 4.4e-78 295.4 208 74.0
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 4.4e-78 295.4 248 67.3
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 9.8e-78 294.3 266 61.3
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.2e-77 293.1 196 77.6
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 6.4e-77 291.6 193 77.7
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 8.3e-77 291.2 199 77.9
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.4e-76 290.4 210 74.3
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 3.2e-76 289.3 182 80.2
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 2.7e-75 286.2 202 73.3
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 3.5e-75 285.8 225 66.7
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.3e-74 283.9 188 77.1
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 5.0e-74 282.0 193 74.1
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.1e-73 280.8 263 61.2
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 4.9e-69 265.4 188 76.6
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 5.4e-68 261.9 208 64.4
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 1.0e-66 257.7 195 65.6
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.1e-63 247.7 207 66.7
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 3.1e-63 246.1 283 53.7
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 5.8e-62 241.9 156 79.5
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.1e-60 237.7 195 61.0
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 5.4e-60 235.3 210 57.6
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.7e-53 213.8 247 52.2
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 1.3e-50 204.1 206 61.2
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 5.6e-49 198.7 221 56.1
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 8.1e-48 194.9 196 57.7
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 1.2e-46 191.0 181 59.7
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.1e-44 184.5 185 48.6
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.7e-43 179.9 145 66.9
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 4.6e-43 179.1 203 46.8
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.8e-42 177.2 109 79.8
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.3e-39 165.6 109 71.6
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.0e-34 151.4 206 42.7
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.0e-27 125.6 152 52.0
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.1e-23 114.8 110 60.0
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 3.4e-14 83.2 72 63.9
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 4.7e-11 72.8 94 53.2
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 4.7e-11 72.8 48 70.8
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 3.9e-10 69.7 44 79.5
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.5e-06 57.8 66 56.1
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 2.0e-06 57.4 43 58.1


User provided reference genes

Program Settings