Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 9.1e-173 610.1 309 100.0
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.3e-147 526.6 290 92.8
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.5e-106 389.4 286 72.7
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.1e-101 374.0 264 74.2
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 3.2e-101 372.5 259 74.5
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 9.3e-101 370.9 264 71.2
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 1.2e-100 370.5 293 65.5
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 2.1e-100 369.8 272 69.5
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.0e-99 367.5 262 73.3
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.0e-99 367.5 265 69.4
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.8e-99 366.7 275 68.4
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 3.9e-99 365.5 264 70.1
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 8.7e-99 364.4 260 73.1
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 8.7e-99 364.4 260 73.1
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 4.3e-98 362.1 267 70.4
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 7.4e-98 361.3 260 70.8
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 9.6e-98 360.9 253 74.3
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 9.6e-98 360.9 263 70.3
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.3e-97 360.5 268 69.0
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 2.8e-97 359.4 266 69.2
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 3.7e-97 359.0 261 70.9
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 4.8e-97 358.6 260 70.8
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.1e-96 357.5 270 67.8
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 1.4e-96 357.1 265 70.2
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 1.8e-96 356.7 260 70.4
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 2.4e-96 356.3 264 68.9
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 4.1e-96 355.5 266 71.4
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.1e-96 355.5 266 71.4
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 5.3e-96 355.1 260 69.2
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 1.2e-95 354.0 260 69.6
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.2e-95 354.0 268 69.0
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.2e-95 354.0 263 68.1
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 1.5e-95 353.6 281 66.9
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 2.0e-95 353.2 272 68.4
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 2.0e-95 353.2 264 69.3
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.6e-95 352.8 266 70.7
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 4.5e-95 352.1 273 67.4
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 4.5e-95 352.1 270 67.4
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 7.6e-95 351.3 290 65.2
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.3e-94 350.5 300 64.3
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 2.2e-94 349.7 271 69.7
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 2.2e-94 349.7 265 69.8
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 2.2e-94 349.7 290 65.9
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.8e-94 349.0 260 68.1
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.8e-94 349.0 260 68.1
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 6.5e-94 348.2 260 68.5
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 6.5e-94 348.2 260 68.5
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 1.1e-93 347.4 260 68.5
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 1.4e-93 347.1 262 68.3
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.9e-93 346.7 260 68.8
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 1.9e-93 346.7 333 59.2
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.9e-93 346.7 259 71.4
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.9e-93 346.7 284 66.5
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 2.5e-93 346.3 247 72.9
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 4.2e-93 345.5 290 64.5
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 6.1e-92 341.7 268 68.3
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.3e-91 340.5 266 68.0
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 5.1e-91 338.6 266 68.0
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 5.1e-91 338.6 268 65.7
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 6.7e-91 338.2 268 67.2
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 6.7e-91 338.2 269 64.3
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.1e-90 337.4 253 69.6
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 2.5e-90 336.3 293 62.8
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 2.5e-90 336.3 293 60.8
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 5.7e-90 335.1 268 65.7
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 9.7e-90 334.3 268 66.0
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 1.6e-89 333.6 265 68.7
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.6e-89 333.6 264 67.0
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 2.8e-89 332.8 268 65.7
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 3.7e-89 332.4 264 67.4
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 4.8e-89 332.0 265 64.5
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 4.8e-89 332.0 255 69.0
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 8.2e-89 331.3 264 67.0
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 5.3e-88 328.6 313 59.4
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 5.3e-88 328.6 266 65.8
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.2e-87 327.4 262 65.3
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.5e-87 327.0 254 68.1
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 5.9e-87 325.1 256 68.0
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.7e-86 323.6 268 61.2
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.1e-85 320.9 290 61.7
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 1.9e-85 320.1 285 64.2
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.5e-85 319.7 275 65.1
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.5e-85 319.7 275 65.1
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 3.2e-85 319.3 285 64.9
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 2.1e-84 316.6 273 64.8
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.7e-81 307.0 273 63.4
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.4e-80 303.1 275 63.3
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 5.3e-80 302.0 265 60.8
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.6e-74 283.1 266 59.4
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 3.1e-72 276.2 179 76.0
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.3e-70 270.8 196 68.9
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.5e-69 267.3 169 79.3
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 4.5e-63 245.7 179 68.7
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.3e-57 227.6 162 73.5
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.7e-57 227.3 264 47.3
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 3.1e-56 223.0 161 72.0
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 7.0e-56 221.9 279 43.7
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.5e-53 214.2 134 76.1
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.6e-52 210.7 255 49.0
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 6.8e-51 205.3 199 58.3
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.5e-50 204.1 151 69.5
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.7e-49 200.7 268 46.3
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 2.2e-49 200.3 168 64.9
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 2.8e-49 199.9 275 44.4
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 5.0e-46 189.1 263 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 8.3e-41 171.8 208 45.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 4.0e-35 152.9 275 40.7
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 6.8e-27 125.6 77 77.9
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 1.4e-24 117.9 79 70.9
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 5.4e-24 115.9 129 53.5
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 2.7e-23 113.6 155 43.2
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 8.9e-19 98.6 262 33.2
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 6.4e-17 92.4 77 59.7
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.1e-16 89.7 178 37.6
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.3e-14 84.0 65 61.5
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.4e-11 74.7 68 61.8
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.6e-10 70.5 135 37.0
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 3.8e-09 66.6 70 54.3


User provided reference genes

Program Settings