Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 5.6e-101 370.9 186 100.0
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 3.1e-91 338.6 186 91.4
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 3.0e-38 162.5 167 55.1
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 2.6e-37 159.5 182 53.8
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 4.4e-37 158.7 129 65.1
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 4.8e-36 155.2 118 66.1
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.4e-35 152.9 117 67.5
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 2.4e-35 152.9 164 54.3
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 3.1e-35 152.5 116 69.0
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 5.3e-35 151.8 176 50.6
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.6e-34 150.2 189 48.7
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.6e-34 150.2 176 50.6
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 2.7e-34 149.4 177 50.3
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 4.5e-34 148.7 122 62.3
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 5.9e-34 148.3 183 51.4
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.0e-33 147.5 119 63.9
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 1.0e-33 147.5 125 60.8
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 1.3e-33 147.1 183 48.1
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 1.3e-33 147.1 185 49.7
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 1.1e-32 144.1 142 55.6
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 1.9e-32 143.3 169 53.3
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 2.5e-32 142.9 163 55.8
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 9.4e-32 141.0 155 52.3
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 9.4e-32 141.0 149 50.3
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 9.4e-32 141.0 168 51.2
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 9.4e-32 141.0 145 54.5
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 1.2e-31 140.6 119 65.5
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 1.6e-31 140.2 171 49.7
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 2.7e-31 139.4 122 59.0
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.7e-31 139.4 191 46.6
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 3.6e-31 139.0 123 58.5
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 6.1e-31 138.3 135 54.1
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 1.0e-30 137.5 137 59.1
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 1.0e-30 137.5 118 60.2
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 1.0e-30 137.5 135 55.6
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 1.0e-30 137.5 119 63.9
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.4e-30 137.1 118 60.2
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.4e-30 137.1 118 61.9
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 1.4e-30 137.1 96 70.8
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.3e-30 136.3 186 48.4
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.0e-30 136.0 191 46.6
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 5.2e-30 135.2 118 57.6
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 5.2e-30 135.2 156 49.4
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 5.2e-30 135.2 191 46.1
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 6.8e-30 134.8 120 59.2
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 6.8e-30 134.8 119 59.7
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 6.8e-30 134.8 128 56.2
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 8.8e-30 134.4 118 57.6
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 8.8e-30 134.4 118 57.6
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 8.8e-30 134.4 118 57.6
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 8.8e-30 134.4 118 57.6
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 8.8e-30 134.4 87 74.7
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 1.2e-29 134.0 179 44.7
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.2e-29 134.0 115 60.0
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 1.2e-29 134.0 90 72.2
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 1.2e-29 134.0 173 49.7
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 2.0e-29 133.3 128 57.8
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 2.0e-29 133.3 93 71.0
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 2.6e-29 132.9 90 71.1
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 4.4e-29 132.1 115 63.5
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 7.5e-29 131.3 118 57.6
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 7.5e-29 131.3 162 47.5
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 9.8e-29 131.0 117 58.1
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 1.3e-28 130.6 90 71.1
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 2.8e-28 129.4 107 60.7
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 3.7e-28 129.0 164 47.0
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 6.3e-28 128.3 166 47.0
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 8.3e-28 127.9 119 52.9
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 1.1e-27 127.5 136 51.5
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 1.8e-27 126.7 116 61.2
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 1.8e-27 126.7 116 56.9
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 4.1e-27 125.6 87 66.7
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 1.2e-26 124.0 127 55.9
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 2.7e-26 122.9 115 55.7
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 3.5e-26 122.5 134 53.7
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 3.5e-26 122.5 78 75.6
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 5.9e-26 121.7 149 46.3
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 1.7e-25 120.2 93 65.6
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 2.3e-25 119.8 113 54.0
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 5.0e-25 118.6 87 66.7
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 1.2e-23 114.0 86 62.8
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 6.8e-22 108.2 93 53.8
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 5.4e-19 98.6 132 46.2
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 7.0e-19 98.2 92 53.3
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 1.2e-18 97.4 100 53.0
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 2.9e-17 92.8 87 48.3
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 5.2e-14 82.0 121 40.5
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 3.9e-09 65.9 89 42.7
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 1.1e-08 64.3 130 38.5
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 1.5e-08 63.9 125 44.0


User provided reference genes

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