Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 4.6e-181 637.9 350 100.0
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 4.0e-116 422.2 310 79.7
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 5.0e-26 122.9 261 43.3
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 1.5e-22 111.3 287 37.3
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 2.8e-21 107.1 273 38.5
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 2.4e-20 104.0 285 36.5
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 2.4e-20 104.0 269 37.9
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 1.2e-19 101.7 294 37.1
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 2.0e-19 100.9 274 37.2
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 2.7e-19 100.5 281 37.4
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 2.7e-19 100.5 268 36.2
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 1.7e-18 97.8 265 36.6
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 2.3e-18 97.4 277 34.3
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.3e-18 97.4 280 36.1
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.3e-18 97.4 277 34.3
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.3e-18 97.4 277 34.3
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 2.3e-18 97.4 294 35.7
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 5.0e-18 96.3 271 32.1
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 6.6e-18 95.9 268 35.8
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 8.6e-18 95.5 289 35.3
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 8.6e-18 95.5 285 36.8
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.5e-17 94.0 280 35.7
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 5.5e-17 92.8 268 36.2
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 7.2e-17 92.4 294 34.4
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 1.2e-16 91.7 282 39.0
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.2e-16 91.7 268 38.8
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 1.6e-16 91.3 276 35.1
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 2.1e-16 90.9 268 36.2
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 2.1e-16 90.9 277 36.8
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 4.7e-16 89.7 285 34.7
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 1.0e-15 88.6 290 35.5
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 6.8e-15 85.9 253 30.0
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 6.8e-15 85.9 271 30.6
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 4.4e-14 83.2 255 35.7
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 4.4e-14 83.2 266 36.5
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 1.3e-13 81.6 262 34.7
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 1.3e-13 81.6 266 35.0
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 2.8e-13 80.5 271 37.3
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.7e-13 80.1 277 33.6
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 3.7e-13 80.1 276 33.3
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 8.3e-13 79.0 291 32.6
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 1.4e-12 78.2 281 33.8
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 4.1e-12 76.6 297 31.6
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 4.1e-12 76.6 249 33.7
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 7.0e-12 75.9 281 33.8
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 1.6e-11 74.7 272 33.5
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 2.0e-11 74.3 283 33.2
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 3.5e-11 73.6 267 28.5
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 3.5e-11 73.6 293 34.1
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 7.8e-11 72.4 258 33.3
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 1.3e-10 71.6 282 30.5
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 1.7e-10 71.2 270 34.8
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 1.7e-10 71.2 272 32.0
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 2.3e-10 70.9 255 28.6
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 5.0e-10 69.7 227 36.6
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 5.0e-10 69.7 269 33.1
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 8.6e-10 68.9 248 31.5
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 2.5e-09 67.4 267 30.7
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 3.3e-09 67.0 210 38.1
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 1.6e-08 64.7 281 31.3
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 2.1e-08 64.3 285 33.3
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 2.1e-08 64.3 272 33.1
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 3.6e-08 63.5 271 30.6
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 3.6e-08 63.5 261 34.1
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 2.3e-07 60.8 89 43.8
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 5.2e-07 59.7 104 41.3
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 8.9e-07 58.9 279 33.7
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 1.5e-06 58.2 257 30.7
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 3.4e-06 57.0 257 30.4
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 7.5e-06 55.8 244 33.2


User provided reference genes

Program Settings