Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 1.2e-181 640.6 568 100.0
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 1.0e-153 547.7 573 92.1
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.3e-76 290.8 577 36.0
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 2.8e-74 283.9 582 43.8
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 6.1e-74 282.7 571 35.0
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.2e-72 278.5 577 35.9
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 2.6e-72 277.3 577 39.0
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 5.7e-72 276.2 575 33.6
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 9.8e-72 275.4 580 35.7
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 1.3e-71 275.0 577 48.4
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.7e-71 274.6 571 50.6
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 1.1e-70 271.9 551 35.6
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 1.4e-70 271.6 581 49.9
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.8e-70 271.2 576 34.2
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 1.8e-70 271.2 577 34.5
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.2e-70 270.4 571 50.6
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 4.1e-70 270.0 571 50.6
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 1.0e-68 265.4 583 35.0
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 1.0e-68 265.4 571 40.5
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 1.3e-68 265.0 571 34.0
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 2.3e-68 264.2 575 33.7
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 2.3e-68 264.2 555 49.9
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 3.9e-68 263.5 573 34.7
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 5.0e-68 263.1 571 48.2
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 6.6e-68 262.7 575 47.0
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 4.3e-67 260.0 547 44.2
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 1.6e-66 258.1 574 49.5
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 1.6e-66 258.1 551 41.4
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 2.8e-66 257.3 583 33.8
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 3.6e-66 256.9 576 34.0
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 8.0e-66 255.8 585 42.9
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 1.0e-65 255.4 579 34.7
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 1.4e-65 255.0 583 45.8
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.8e-65 254.6 588 35.5
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 1.8e-65 254.6 553 35.3
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 2.3e-65 254.2 578 35.1
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 5.2e-65 253.1 573 33.0
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 5.2e-65 253.1 583 44.8
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 1.5e-64 251.5 531 35.2
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.5e-64 251.5 583 46.0
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 2.6e-64 250.8 591 33.5
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 3.4e-64 250.4 577 41.9
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 5.8e-64 249.6 550 33.8
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 7.5e-64 249.2 570 50.7
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 9.8e-64 248.8 573 53.8
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 1.7e-63 248.1 573 32.5
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 1.7e-63 248.1 580 52.6
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.7e-63 248.1 555 36.0
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 2.2e-63 247.7 569 32.7
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 2.2e-63 247.7 563 32.5
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 1.9e-62 244.6 590 33.1
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.4e-62 244.2 578 51.4
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 7.0e-62 242.7 568 38.6
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 9.2e-62 242.3 578 50.5
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.2e-61 241.9 578 48.8
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 1.6e-61 241.5 568 39.8
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 1.6e-61 241.5 574 49.1
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.0e-61 241.1 578 50.5
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 2.0e-61 241.1 583 32.9
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 2.7e-61 240.7 572 39.7
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 2.7e-61 240.7 578 32.2
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 6.0e-61 239.6 577 33.1
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 6.0e-61 239.6 578 37.7
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 7.8e-61 239.2 565 40.0
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 1.0e-60 238.8 563 40.9
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 1.0e-60 238.8 572 51.2
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 1.7e-60 238.0 576 32.3
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 2.3e-60 237.7 581 41.1
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 3.0e-60 237.3 568 36.4
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 3.0e-60 237.3 568 36.4
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.0e-60 237.3 578 52.6
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 5.0e-60 236.5 592 37.2
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 1.1e-59 235.3 582 49.1
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 1.5e-59 235.0 566 33.7
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 1.9e-59 234.6 563 56.8
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 3.3e-59 233.8 581 38.7
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 4.3e-59 233.4 625 31.2
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 1.2e-58 231.9 558 32.4
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 2.1e-58 231.1 586 32.3
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.8e-58 230.7 620 41.6
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.7e-58 229.9 188 64.4
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 1.1e-57 228.8 570 39.5
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 1.1e-57 228.8 170 70.0
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 2.3e-57 227.6 574 32.1
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 4.0e-57 226.9 562 44.1
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 5.2e-57 226.5 562 45.4
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 8.9e-57 225.7 569 52.7
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 1.7e-55 221.5 582 35.4
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 1.1e-54 218.8 550 47.8
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 2.4e-54 217.6 193 62.2
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 2.4e-54 217.6 576 46.7
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 7.1e-54 216.1 562 44.7
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 2.7e-53 214.2 590 31.4
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 2.7e-53 214.2 569 50.4
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 6.0e-53 213.0 594 46.0
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 6.0e-53 213.0 195 58.5
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 6.6e-52 209.5 562 38.1
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 6.6e-52 209.5 180 60.0
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 4.3e-51 206.8 162 64.2
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 5.6e-51 206.5 138 73.9
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 2.1e-50 204.5 601 39.4
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 2.1e-50 204.5 180 60.0
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 2.1e-50 204.5 572 29.9
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 2.3e-49 201.1 530 30.2
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 4.0e-49 200.3 563 40.0
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 8.9e-49 199.1 143 71.3
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 1.5e-48 198.4 541 33.5
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 1.3e-47 195.3 586 29.7
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 6.4e-47 193.0 162 61.1
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 8.3e-47 192.6 572 30.2
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 1.1e-46 192.2 568 33.6
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 2.7e-45 187.6 507 29.2
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 6.0e-45 186.4 571 29.2
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.7e-44 184.9 149 66.4
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 6.6e-44 183.0 600 40.3
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 6.6e-44 183.0 600 40.3
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 4.7e-42 176.8 172 58.1
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 1.4e-41 175.3 196 52.0
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 3.1e-41 174.1 577 36.0
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 2.2e-39 167.9 176 54.5
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 1.9e-35 154.8 511 32.1
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 2.4e-33 147.9 109 67.9
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 7.6e-32 142.9 149 53.0
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 4.6e-29 133.7 127 54.3
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 6.2e-26 123.2 151 49.7
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 1.8e-20 105.1 141 43.3
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 4.3e-19 100.5 107 52.3
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 1.3e-15 89.0 562 28.5
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 2.2e-15 88.2 74 60.8
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 2.9e-15 87.8 76 59.2
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 1.9e-14 85.1 108 41.7
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 1.8e-12 78.6 82 46.3
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 1.4e-09 68.9 204 29.4


User provided reference genes

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