Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 3.1e-70 268.5 149 100.0
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 3.5e-69 265.0 149 99.3
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 6.0e-53 211.1 144 81.2
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 6.0e-53 211.1 150 78.7
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 6.0e-53 211.1 149 78.5
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 1.3e-52 209.9 146 79.5
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.3e-52 209.9 146 79.5
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.3e-52 209.1 145 79.3
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 3.0e-52 208.8 150 77.3
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 5.0e-52 208.0 143 79.7
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 6.6e-52 207.6 144 79.2
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 8.6e-52 207.2 143 79.7
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.1e-51 206.8 144 79.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.5e-51 206.5 146 80.8
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.5e-51 206.5 146 80.8
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 1.9e-51 206.1 142 78.9
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.5e-51 205.7 150 77.3
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 2.5e-51 205.7 144 79.2
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 3.3e-51 205.3 147 75.5
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.3e-51 205.3 146 80.1
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 3.3e-51 205.3 147 79.6
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 4.3e-51 204.9 143 77.6
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 5.6e-51 204.5 144 79.9
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 5.6e-51 204.5 142 78.9
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 7.3e-51 204.1 147 75.5
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 7.3e-51 204.1 142 79.6
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.5e-51 203.8 146 79.5
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.5e-51 203.8 146 79.5
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.2e-50 203.4 144 75.0
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.2e-50 203.4 145 76.6
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.2e-50 203.4 143 77.6
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.1e-50 202.6 146 79.5
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.1e-50 202.6 142 78.2
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 2.1e-50 202.6 143 77.6
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 3.6e-50 201.8 149 73.2
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 3.6e-50 201.8 142 77.5
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 4.7e-50 201.4 142 76.8
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 8.0e-50 200.7 144 75.7
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.4e-49 199.9 144 75.7
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 1.8e-49 199.5 146 74.0
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 3.1e-49 198.7 143 75.5
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 3.1e-49 198.7 141 76.6
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 5.2e-49 198.0 143 76.2
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 5.2e-49 198.0 160 71.9
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 5.2e-49 198.0 142 74.6
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 5.2e-49 198.0 143 75.5
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 5.2e-49 198.0 146 74.0
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 6.8e-49 197.6 151 76.2
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 6.8e-49 197.6 143 76.9
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 1.2e-48 196.8 148 70.9
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.2e-48 196.8 143 75.5
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.5e-48 196.4 144 73.6
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.5e-48 196.4 144 73.6
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 2.6e-48 195.7 144 75.0
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 4.4e-48 194.9 144 73.6
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 5.8e-48 194.5 143 73.4
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.3e-47 193.4 144 72.2
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.3e-47 193.4 147 71.4
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.7e-47 193.0 142 74.6
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 2.2e-47 192.6 146 71.9
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 3.7e-47 191.8 144 72.9
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 3.7e-47 191.8 146 71.9
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 8.3e-47 190.7 148 71.6
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.1e-46 190.3 145 69.7
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.4e-46 189.9 141 71.6
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.4e-46 189.9 148 70.3
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 1.4e-46 189.9 148 70.3
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.9e-46 189.5 127 81.9
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 4.1e-46 188.3 148 70.3
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 4.1e-46 188.3 148 69.6
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 4.1e-46 188.3 148 70.3
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 4.1e-46 188.3 146 70.5
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 5.4e-46 188.0 148 70.3
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 7.0e-46 187.6 148 70.3
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 7.0e-46 187.6 146 70.5
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 9.2e-46 187.2 148 69.6
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 9.2e-46 187.2 148 68.9
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 9.2e-46 187.2 148 69.6
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 9.2e-46 187.2 148 69.6
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 9.2e-46 187.2 148 69.6
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 2.7e-45 185.7 148 69.6
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 7.8e-45 184.1 140 70.0
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 2.3e-44 182.6 141 70.2
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 3.0e-44 182.2 144 71.5
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 1.9e-43 179.5 139 69.1
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 3.3e-43 178.7 148 67.6
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 8.1e-42 174.1 146 66.4
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 8.9e-41 170.6 148 67.6
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 2.0e-40 169.5 144 70.1
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 9.9e-40 167.2 147 66.0
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 8.3e-39 164.1 147 65.3
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 5.4e-38 161.4 146 65.1
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 7.1e-38 161.0 137 64.2
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 5.1e-36 154.8 139 61.2
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 1.1e-35 153.7 210 48.6
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 1.5e-35 153.3 148 63.5
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 2.5e-35 152.5 143 62.9
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.6e-34 149.8 107 77.6
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.6e-34 148.7 140 65.0
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.7e-34 148.3 137 60.6
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 1.4e-33 146.7 105 77.1
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 1.8e-33 146.4 106 76.4
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 3.4e-32 142.1 146 58.2
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 2.2e-31 139.4 137 52.6
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 3.8e-31 138.7 107 74.8
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.1e-30 137.1 138 52.9
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.4e-30 136.7 143 58.7
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 5.4e-30 134.8 145 56.6
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 2.1e-29 132.9 105 71.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 4.6e-29 131.7 108 66.7
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 6.0e-29 131.3 104 70.2
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.0e-28 130.6 143 56.6
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 2.3e-28 129.4 106 69.8
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 8.7e-28 127.5 137 48.9
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.9e-27 126.3 173 50.3
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.2e-26 123.6 91 74.7
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.6e-26 122.1 144 53.5
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.7e-23 113.2 81 79.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 2.9e-23 112.5 143 51.7
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.6e-21 106.7 143 49.0
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 1.6e-21 106.7 143 49.0
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 3.9e-20 102.1 130 51.5
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 6.9e-17 91.3 66 74.2
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 1.0e-12 77.4 141 37.6
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 2.4e-09 66.2 50 64.0
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.0e-08 63.2 127 38.6
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 5.8e-08 61.6 40 75.0
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 7.6e-08 61.2 138 30.4
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.7e-07 60.1 46 65.2
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 7.1e-06 54.7 42 61.9


User provided reference genes

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