Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 2.9e-160 568.5 292 100.0
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 5.6e-71 271.9 286 58.4
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 4.6e-65 252.3 282 55.3
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 7.8e-65 251.5 282 56.0
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 8.6e-64 248.1 282 55.7
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 7.5e-60 235.0 278 54.0
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 2.2e-59 233.4 290 54.8
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 7.1e-58 228.4 268 50.7
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-56 224.6 273 51.3
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 8.1e-54 214.9 235 58.3
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 5.8e-52 208.8 216 60.2
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-50 204.5 216 60.6
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 1.6e-49 200.7 236 53.8
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-47 194.1 232 56.0
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 1.7e-43 180.6 294 43.9
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 1.7e-43 180.6 294 43.5
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 3.8e-43 179.5 290 44.1
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 4.9e-43 179.1 294 43.5
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 1.9e-42 177.2 294 42.5
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 3.2e-42 176.4 294 41.8
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 4.2e-42 176.0 290 42.4
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 7.1e-42 175.3 290 42.8
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.2e-41 174.5 293 42.7
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 2.7e-41 173.3 293 42.3
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 3.5e-41 172.9 294 41.2
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-41 172.9 290 42.4
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 4.6e-41 172.6 290 42.8
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 4.6e-41 172.6 293 40.6
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 6.0e-41 172.2 281 42.7
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 6.0e-41 172.2 204 55.4
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 7.8e-41 171.8 288 41.3
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 7.8e-41 171.8 292 40.4
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 7.8e-41 171.8 202 52.5
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 1.0e-40 171.4 286 42.7
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 1.0e-40 171.4 293 41.3
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 1.0e-40 171.4 288 42.7
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.0e-40 171.4 294 40.8
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 1.7e-40 170.6 295 41.4
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 1.7e-40 170.6 293 40.6
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 3.0e-40 169.9 302 40.4
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 3.0e-40 169.9 290 40.7
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 3.0e-40 169.9 286 42.0
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 3.9e-40 169.5 289 41.5
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 3.9e-40 169.5 291 41.9
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 5.1e-40 169.1 305 41.3
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 5.1e-40 169.1 291 41.6
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 6.6e-40 168.7 293 41.0
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 1.1e-39 167.9 321 38.0
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.5e-39 167.5 286 42.0
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 1.5e-39 167.5 286 42.0
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 1.5e-39 167.5 304 40.1
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 1.9e-39 167.2 290 41.7
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 2.5e-39 166.8 294 41.2
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 2.5e-39 166.8 155 64.5
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 3.3e-39 166.4 286 40.9
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 4.3e-39 166.0 290 41.4
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 4.3e-39 166.0 309 41.1
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 4.3e-39 166.0 290 40.0
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 4.3e-39 166.0 290 40.7
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 5.6e-39 165.6 286 41.6
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 5.6e-39 165.6 202 51.5
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 5.6e-39 165.6 290 40.7
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 1.3e-38 164.5 290 40.7
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 1.6e-38 164.1 289 40.8
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 3.6e-38 162.9 289 39.4
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 4.8e-38 162.5 286 40.6
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 4.8e-38 162.5 298 40.6
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 4.8e-38 162.5 289 39.4
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 6.2e-38 162.2 293 40.6
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 8.1e-38 161.8 290 41.0
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 8.1e-38 161.8 290 40.3
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 8.1e-38 161.8 269 41.6
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 1.8e-37 160.6 282 40.8
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-37 160.6 155 62.6
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 1.8e-37 160.6 289 39.1
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.4e-37 160.2 269 42.0
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 4.0e-37 159.5 289 39.8
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 5.3e-37 159.1 278 39.9
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 6.9e-37 158.7 282 40.8
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 6.9e-37 158.7 293 39.6
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 6.9e-37 158.7 273 41.8
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 9.0e-37 158.3 285 40.4
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 1.2e-36 157.9 273 42.1
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 1.5e-36 157.5 312 38.1
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.5e-36 157.5 304 39.1
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 2.6e-36 156.8 273 41.8
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 2.6e-36 156.8 290 40.3
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 2.6e-36 156.8 291 39.2
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 3.4e-36 156.4 271 41.3
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 5.8e-36 155.6 290 39.7
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 7.6e-36 155.2 299 39.8
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 9.9e-36 154.8 273 41.0
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 1.3e-35 154.5 284 38.7
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.3e-35 154.5 286 39.5
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.3e-35 154.5 288 39.9
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 2.2e-35 153.7 285 38.9
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 2.2e-35 153.7 196 48.0
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 4.9e-35 152.5 301 38.5
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 8.4e-35 151.8 285 38.6
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 1.1e-34 151.4 309 37.9
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 1.4e-34 151.0 315 38.1
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 7.1e-34 148.7 286 38.8
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 9.3e-34 148.3 290 39.0
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 9.3e-34 148.3 287 39.0
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.2e-33 147.9 313 37.4
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 1.6e-33 147.5 280 35.7
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.5e-33 146.4 290 38.6
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 6.0e-33 145.6 185 52.4
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 7.9e-33 145.2 286 36.7
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 1.0e-32 144.8 291 37.5
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 2.1e-30 137.1 272 37.1
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 2.1e-30 137.1 272 37.1
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 2.4e-29 133.7 234 42.3
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 5.3e-29 132.5 385 31.7
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 2.6e-28 130.2 296 35.5
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 2.6e-28 130.2 310 34.5
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 4.5e-28 129.4 284 34.9
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 2.2e-27 127.1 234 39.3
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-25 119.8 172 48.8
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.3e-24 117.9 152 53.9
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 3.0e-24 116.7 196 44.9
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 3.9e-24 116.3 272 34.9
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 3.9e-24 116.3 152 53.3
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.1e-23 114.8 207 41.1
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 1.1e-23 114.8 241 38.6
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 3.3e-23 113.2 125 52.8
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 3.3e-23 113.2 384 29.2
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 5.6e-23 112.5 124 54.0
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 2.4e-21 107.1 219 37.9
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 2.4e-21 107.1 291 32.6
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 1.7e-19 100.9 155 40.0
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 5.5e-18 95.9 292 28.4
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 7.4e-15 85.5 156 43.6
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 1.4e-13 81.3 152 42.1
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 6.9e-13 79.0 104 43.3
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 2.6e-12 77.0 130 43.1
PSO447G0093 Papaver somniferum HOM05D004787 ORTHO05D304571 3.4e-12 76.6 107 48.6
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 5.9e-12 75.9 121 44.6
PSO832G3890 Papaver somniferum HOM05D000071 ORTHO05D003524 2.9e-11 73.6 73 56.2
PSO759G0004 Papaver somniferum HOM05D004787 ORTHO05D302987 2.7e-09 67.0 80 51.2
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 3.6e-09 66.6 89 42.7
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 2.3e-08 63.9 121 34.7
PSO170G1852 Papaver somniferum HOM05D004787 ORTHO05D302361 2.3e-08 63.9 70 55.7
PSO210G5779 Papaver somniferum HOM05D004787 ORTHO05D303704 2.3e-08 63.9 70 55.7


User provided reference genes

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