Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO461G0064 Papaver somniferum HOM05D008529 ORTHO05D010219 3.9e-152 541.6 306 100.0
PSO063G3962 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-151 540.0 306 99.3
PSO339G5611 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-151 540.0 306 99.3
PSO384G4172 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-151 540.0 306 99.7
PSO478G1972 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-151 540.0 306 99.3
PSO700G0127 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-151 540.0 306 99.3
PSO832G0739 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-151 540.0 306 99.3
PSO461G0058 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-151 538.9 306 99.0
PSO384G4383 Papaver somniferum HOM05D008529 ORTHO05D010219 3.3e-151 538.5 306 99.0
PSO541G2562 Papaver somniferum HOM05D008529 ORTHO05D010219 4.4e-151 538.1 306 99.0
PSO384G0957 Papaver somniferum HOM05D008529 ORTHO05D010219 1.3e-150 536.6 306 98.7
PSO133G0069 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-150 536.2 306 98.7
PSO782G5516 Papaver somniferum HOM05D008529 ORTHO05D010219 6.3e-150 534.3 306 92.8
PSO017G2861 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-149 533.5 306 92.8
PSO210G0056 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-149 533.5 306 92.8
PSO541G6160 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-149 533.5 306 92.8
PSO832G3163 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-149 533.5 306 92.8
PSO170G2488 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-149 532.3 306 92.5
PSO210G5199 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-149 532.3 306 92.5
PSO017G2108 Papaver somniferum HOM05D008529 ORTHO05D010219 3.1e-149 531.9 306 94.1
PSO063G4627 Papaver somniferum HOM05D008529 ORTHO05D010219 3.1e-149 531.9 306 92.5
PSO210G2338 Papaver somniferum HOM05D008529 ORTHO05D010219 4.1e-149 531.6 306 92.5
PSO384G0405 Papaver somniferum HOM05D008529 ORTHO05D010219 4.1e-149 531.6 306 92.5
PSO478G2872 Papaver somniferum HOM05D008529 ORTHO05D010219 4.1e-149 531.6 306 92.5
PSO541G3973 Papaver somniferum HOM05D008529 ORTHO05D010219 5.3e-149 531.2 306 92.5
PSO675G7323 Papaver somniferum HOM05D008529 ORTHO05D010219 5.3e-149 531.2 306 92.5
PSO210G6697 Papaver somniferum HOM05D008529 ORTHO05D010219 1.2e-148 530.0 302 98.0
PSO675G5337 Papaver somniferum HOM05D008529 ORTHO05D010219 1.2e-148 530.0 306 95.4
PSO761G0228 Papaver somniferum HOM05D008529 ORTHO05D010219 1.2e-148 530.0 306 92.2
PSO541G0169 Papaver somniferum HOM05D008529 ORTHO05D010219 1.6e-148 529.6 306 92.2
PSO063G7383 Papaver somniferum HOM05D008529 ORTHO05D010219 8.5e-147 523.9 302 93.7
PSO423G0120 Papaver somniferum HOM05D008529 ORTHO05D010219 5.9e-140 501.1 292 92.1
PSO541G0799 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-138 496.9 306 87.3
PSO478G4936 Papaver somniferum HOM05D008529 ORTHO05D010219 3.6e-137 491.9 285 91.6
PSO386G0005 Papaver somniferum HOM05D008529 ORTHO05D010219 3.0e-136 488.8 283 91.9
PSO063G5131 Papaver somniferum HOM05D008529 ORTHO05D010219 1.2e-127 460.3 238 99.6
PSO724G0644 Papaver somniferum HOM05D008529 ORTHO05D010219 4.4e-111 405.2 208 99.0
PSO017G3549 Papaver somniferum HOM05D008529 ORTHO05D010219 1.4e-109 400.2 209 97.1
PSO761G0531 Papaver somniferum HOM05D008529 ORTHO05D010219 4.9e-102 375.2 190 99.5
PSO761G0474 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-101 372.9 190 98.9
PSO339G4421 Papaver somniferum HOM05D008529 ORTHO05D010219 1.3e-99 367.1 187 98.9
PSO732G0541 Papaver somniferum HOM05D008529 ORTHO05D010219 2.1e-92 343.2 173 98.3
PSO478G4463 Papaver somniferum HOM05D008529 ORTHO05D010219 5.6e-74 282.0 181 82.3
PSO017G1082 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-66 256.5 166 98.8
PSO170G6704 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-65 252.3 166 87.3
PSO423G0183 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-65 252.3 166 87.3
PSO675G1768 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-65 252.3 166 87.3
PSO801G0719 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-65 252.3 166 87.3
PSO170G6734 Papaver somniferum HOM05D008529 ORTHO05D010219 8.7e-59 231.5 113 99.1
PSO541G0326 Papaver somniferum HOM05D008529 ORTHO05D010219 1.3e-57 227.6 110 100.0
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.5e-15 86.3 314 24.8
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.5e-15 86.3 314 24.8
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.0e-14 85.1 314 24.5
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.0e-14 85.1 314 24.8
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.3e-14 84.7 314 24.5
RcHm_v2.0_Chr6g0260681 Rosa chinensis HOM05D008529 ORTHO05D010219 5.0e-14 82.8 315 26.3
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.5e-13 80.5 314 24.2
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 2.1e-12 77.4 311 24.4
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 6.1e-12 75.9 323 24.8
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.0e-11 75.1 317 26.2
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.8e-11 72.4 324 25.0
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-10 70.1 129 31.8
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 3.4e-10 70.1 298 24.5
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.7e-10 69.3 326 24.5
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.7e-10 69.3 326 24.5
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 7.5e-10 68.9 297 25.3
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 7.5e-10 68.9 322 25.5
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 7.5e-10 68.9 322 25.5
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-09 68.2 303 26.7
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 67.0 129 29.5
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 67.0 129 29.5
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 67.0 129 29.5
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 67.0 129 29.5
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 3.7e-09 66.6 301 24.3
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 1.8e-08 64.3 232 26.3
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 4.1e-08 63.2 301 28.2
TWI34G1527 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.1e-08 63.2 226 24.8
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.4e-08 62.8 317 24.0
Rhsim01G0133600 Rhododendron simsii HOM05D001576 ORTHO05D010219 5.4e-08 62.8 232 25.9
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 7.0e-08 62.4 124 28.2
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 7.0e-08 62.4 124 28.2
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-08 62.0 124 29.8
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.2e-08 62.0 208 25.0
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 1.2e-07 61.6 124 29.0
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-07 61.6 123 30.1
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-07 61.6 302 25.8
RcHm_v2.0_Chr7g0200361 Rosa chinensis HOM05D003861 ORTHO05D003172 1.2e-07 61.6 193 23.8
vmacro04017 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.2e-07 61.6 253 26.5
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 124 29.8
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 209 23.9
CiPaw.08G115400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 129 28.7
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 209 23.9
Potri.010G014250 Populus trichocarpa HOM05D001576 ORTHO05D010219 2.0e-07 60.8 124 28.2
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 2.0e-07 60.8 203 27.6
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-07 60.5 302 26.2
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 2.7e-07 60.5 303 28.1
RcHm_v2.0_Chr5g0049061 Rosa chinensis HOM05D007743 ORTHO05D010219 2.7e-07 60.5 89 33.7
TWI74G0837 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.7e-07 60.5 201 24.4
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 306 21.9
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 302 26.5
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 305 27.9
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 305 27.9
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 305 27.9
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 209 23.4
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 4.6e-07 59.7 303 22.8
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.6e-07 59.7 188 25.5
CiPaw.03G181800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-07 59.3 306 23.5
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-07 59.3 230 24.8
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-07 59.3 233 24.9
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 5.9e-07 59.3 210 26.7
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 5.9e-07 59.3 311 23.5
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 5.9e-07 59.3 311 23.5
PSO339G5938 Papaver somniferum HOM05D019271 ORTHO05D013620 5.9e-07 59.3 141 27.7
Rhsim09G0056800 Rhododendron simsii HOM05D001576 ORTHO05D010219 5.9e-07 59.3 232 23.7
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 7.8e-07 58.9 95 32.6
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.8e-07 58.9 305 27.9
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-07 58.9 230 24.8
CiPaw.14G032300 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-07 58.9 156 25.6
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-07 58.9 230 24.8
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 7.8e-07 58.9 310 23.2
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.0e-06 58.5 288 22.9
Os06g0635500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.0e-06 58.5 191 26.2
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-06 58.2 230 24.8
HanXRQChr08g0232381 Helianthus annuus HOM05D001576 ORTHO05D000401 1.3e-06 58.2 325 29.2
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 1.3e-06 58.2 138 26.8
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.3e-06 58.2 313 22.0
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 1.3e-06 58.2 299 23.1
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 1.7e-06 57.8 126 27.0
RcHm_v2.0_Chr2g0144051 Rosa chinensis HOM05D007743 ORTHO05D010219 1.7e-06 57.8 89 32.6
SGA_v2.0_scaffold167G38458 Striga asiatica HOM05D001576 ORTHO05D000401 1.7e-06 57.8 200 26.5
vmacro07382 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.7e-06 57.8 158 27.8
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 2.3e-06 57.4 235 24.3
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-06 57.4 183 26.8
FvH4_7g00330 Fragaria vesca HOM05D003861 ORTHO05D003172 2.3e-06 57.4 214 25.2
CiPaw.03G175800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-06 57.0 198 26.3
CiPaw.05G086200 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-06 57.0 152 27.0
FvH4_3g23932 Fragaria vesca HOM05D011010 ORTHO05D012519 2.9e-06 57.0 243 24.3
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 2.9e-06 57.0 219 26.0
CiPaw.13G033200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.9e-06 56.6 152 27.0
CiPaw.13G160200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.9e-06 56.6 152 27.0
FvH4_4g12912 Fragaria vesca HOM05D007743 ORTHO05D004645 3.9e-06 56.6 303 23.1
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 3.9e-06 56.6 131 27.5
Manes.14G157656 Manihot esculenta HOM05D007743 ORTHO05D010219 3.9e-06 56.6 134 26.9
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 3.9e-06 56.6 189 24.9
CSS0006547 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.0e-06 56.2 124 25.8
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 5.0e-06 56.2 308 23.4
FAN02G1001 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.0e-06 56.2 156 23.1
FAN04G2392 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.0e-06 56.2 152 29.6
CiPaw.02G131900 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 152 27.0
CiPaw.16G006000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 128 25.8
Os06g0660650 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 6.6e-06 55.8 103 30.1
QL05p011416 Quercus lobata HOM05D001576 ORTHO05D016378 6.6e-06 55.8 218 22.5
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 8.6e-06 55.5 159 25.2
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 132 25.8
CiPaw.01G110200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 199 24.6
CiPaw.15G067200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 234 26.5
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 237 24.1
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 8.6e-06 55.5 311 22.8
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.6e-06 55.5 310 23.9
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 8.6e-06 55.5 196 25.0
QL02p057958 Quercus lobata HOM05D001576 ORTHO05D000401 8.6e-06 55.5 301 28.9


User provided reference genes

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