Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3425 Papaver somniferum HOM05D003627 ORTHO05D004307 3.7e-64 248.1 124 100.0
PSO455G0147 Papaver somniferum HOM05D003627 ORTHO05D004307 3.7e-64 248.1 124 100.0
Lj7A717G55 Lonicera japonica HOM05D003627 ORTHO05D004307 3.0e-50 201.8 124 79.0
Actinidia15690 Actinidia chinensis HOM05D003627 ORTHO05D004307 9.7e-49 196.8 124 78.2
Duzib150G1042 Durio zibethinus HOM05D003627 ORTHO05D004307 1.3e-48 196.4 122 77.0
Duzib168G1482 Durio zibethinus HOM05D003627 ORTHO05D004307 1.3e-48 196.4 122 78.7
Duzib187G0128 Durio zibethinus HOM05D003627 ORTHO05D004307 2.2e-48 195.7 122 78.7
Gohir.A13G206900 Gossypium hirsutum HOM05D003627 ORTHO05D004307 2.2e-48 195.7 122 78.7
Gohir.D13G211500 Gossypium hirsutum HOM05D003627 ORTHO05D004307 2.2e-48 195.7 122 78.7
Gorai.013G241600 Gossypium raimondii HOM05D003627 ORTHO05D004307 2.2e-48 195.7 122 78.7
Hma1.2p1_0000F.1_g000840 Hydrangea macrophylla HOM05D003627 ORTHO05D004307 2.2e-48 195.7 124 75.8
PGR044G1771 Punica granatum HOM05D003627 ORTHO05D004307 2.2e-48 195.7 122 77.9
CiPaw.08G013800 Carya illinoinensis HOM05D003627 ORTHO05D004307 2.8e-48 195.3 122 78.7
CSS0039202 Camellia sinensis var. sinensis HOM05D003627 ORTHO05D004307 3.7e-48 194.9 124 76.6
Atru.chr7.2370 Acer truncatum HOM05D003627 ORTHO05D004307 4.8e-48 194.5 122 77.0
Cfa013184 Carpinus fangiana HOM05D003627 ORTHO05D004307 4.8e-48 194.5 122 77.9
Thecc.09G148600 Theobroma cacao HOM05D003627 ORTHO05D004307 4.8e-48 194.5 122 77.9
BcaC03g17902 Brassica carinata HOM05D003627 ORTHO05D004307 8.2e-48 193.7 124 77.4
A02p39740 Brassica napus HOM05D003627 ORTHO05D004307 8.2e-48 193.7 124 77.4
C02p59530 Brassica napus HOM05D003627 ORTHO05D004307 8.2e-48 193.7 124 77.4
CSS0004095 Camellia sinensis var. sinensis HOM05D003627 ORTHO05D004307 8.2e-48 193.7 124 77.4
Dinv11613 Davidia involucrata HOM05D003627 ORTHO05D004307 8.2e-48 193.7 124 76.6
Eucgr.C01792 Eucalyptus grandis HOM05D003627 ORTHO05D004307 8.2e-48 193.7 122 77.0
PGR044G1161 Punica granatum HOM05D003627 ORTHO05D004307 1.1e-47 193.4 122 77.0
RcHm_v2.0_Chr6g0298671 Rosa chinensis HOM05D003627 ORTHO05D004307 1.1e-47 193.4 122 77.0
Carub.0006s2330 Capsella rubella HOM05D003627 ORTHO05D004307 1.8e-47 192.6 122 77.0
Eucgr.C02813 Eucalyptus grandis HOM05D003627 ORTHO05D004307 3.1e-47 191.8 122 77.0
Manes.16G119000 Manihot esculenta HOM05D003627 ORTHO05D004307 3.1e-47 191.8 122 76.2
TAR626G0665 Trochodendron aralioides HOM05D003627 ORTHO05D004307 4.1e-47 191.4 124 77.4
FvH4_2g29690 Fragaria vesca HOM05D003627 ORTHO05D004307 5.3e-47 191.0 122 75.4
FAN15G2106 Fragaria x ananassa HOM05D003627 ORTHO05D004307 5.3e-47 191.0 122 75.4
FAN20G0596 Fragaria x ananassa HOM05D003627 ORTHO05D004307 5.3e-47 191.0 121 76.0
FAN24G2732 Fragaria x ananassa HOM05D003627 ORTHO05D004307 5.3e-47 191.0 122 75.4
FAN27G2400 Fragaria x ananassa HOM05D003627 ORTHO05D004307 5.3e-47 191.0 121 76.0
Gohir.A02G112400 Gossypium hirsutum HOM05D003627 ORTHO05D004307 5.3e-47 191.0 122 76.2
Nn2g11929 Nelumbo nucifera HOM05D003627 ORTHO05D004307 5.3e-47 191.0 124 74.2
HanXRQChr06g0179891 Helianthus annuus HOM05D003627 ORTHO05D004307 6.9e-47 190.7 122 77.9
ClCG05G017090 Citrullus lanatus HOM05D003627 ORTHO05D004307 9.0e-47 190.3 122 74.6
COL.COLO4_23986 Corchorus olitorius HOM05D003627 ORTHO05D004307 9.0e-47 190.3 120 78.3
ECA240G2460 Erigeron canadensis HOM05D003627 ORTHO05D004307 1.2e-46 189.9 122 77.0
MD08G1143000 Malus domestica HOM05D003627 ORTHO05D004307 1.2e-46 189.9 122 76.2
AL6G37230 Arabidopsis lyrata HOM05D003627 ORTHO05D004307 1.5e-46 189.5 122 76.2
Prupe.1G472700 Prunus persica HOM05D003627 ORTHO05D004307 1.5e-46 189.5 122 75.4
ATR0737G081 Amborella trichopoda HOM05D003627 ORTHO05D004307 2.0e-46 189.1 124 75.0
MBI01_g13086_MAGBIO Magnolia biondii HOM05D003627 ORTHO05D004307 2.0e-46 189.1 124 75.8
HanXRQChr03g0062131 Helianthus annuus HOM05D003627 ORTHO05D004307 2.6e-46 188.7 122 77.0
Lsat_1_v5_gn_5_31481 Lactuca sativa HOM05D003627 ORTHO05D004307 2.6e-46 188.7 124 75.0
Oeu045199.1 Olea europaea HOM05D003627 ORTHO05D004307 2.6e-46 188.7 124 74.2
Thhalv10005137m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 3.4e-46 188.3 122 76.2
VMungo0647G0605 Vigna mungo HOM05D003627 ORTHO05D004307 3.4e-46 188.3 122 75.4
CiPaw.07G220400 Carya illinoinensis HOM05D003627 ORTHO05D004307 4.5e-46 188.0 122 75.4
GSVIVG01035802001 Vitis vinifera HOM05D003627 ORTHO05D004307 4.5e-46 188.0 121 76.0
Manes.03G017600 Manihot esculenta HOM05D003627 ORTHO05D004307 5.9e-46 187.6 122 73.8
Nitab4.5_0006827g0010 Nicotiana tabacum HOM05D003627 ORTHO05D004307 5.9e-46 187.6 124 75.0
AT5G25450 Arabidopsis thaliana HOM05D003627 ORTHO05D004307 7.7e-46 187.2 122 75.4
CANSAT78G1909 Cannabis sativa HOM05D003627 ORTHO05D004307 7.7e-46 187.2 122 73.8
Lj1g0024003 Lotus japonicus HOM05D003627 ORTHO05D004307 7.7e-46 187.2 122 74.6
Cpa.g.sc1755.1 Carica papaya HOM05D003627 ORTHO05D004307 1.0e-45 186.8 122 74.6
HanXRQChr05g0142301 Helianthus annuus HOM05D003627 ORTHO05D004307 1.0e-45 186.8 123 75.6
Peaxi162Scf00341g00821 Petunia axillaris HOM05D003627 ORTHO05D004307 1.0e-45 186.8 124 74.2
CDE10G0654 Ceratophyllum demersum HOM05D003627 ORTHO05D004307 1.3e-45 186.4 123 74.0
Migut.A00309 Erythranthe guttata HOM05D003627 ORTHO05D004307 1.3e-45 186.4 124 74.2
Lalb_Chr23g0268801 Lupinus albus HOM05D003627 ORTHO05D004307 1.7e-45 186.0 122 71.3
Sabra18G0032500 Salix brachista HOM05D003627 ORTHO05D004307 1.7e-45 186.0 122 73.0
Lalb_Chr08g0243901 Lupinus albus HOM05D003627 ORTHO05D004307 2.2e-45 185.7 122 71.3
Potri.006G250000 Populus trichocarpa HOM05D003627 ORTHO05D004307 2.2e-45 185.7 122 73.0
Sed0001403 Sechium edule HOM05D003627 ORTHO05D004307 2.9e-45 185.3 122 73.0
CAN.G98.17 Capsicum annuum HOM05D003627 ORTHO05D004307 3.8e-45 184.9 124 72.6
MD15G1119900 Malus domestica HOM05D003627 ORTHO05D004307 3.8e-45 184.9 122 73.0
Potri.018G031400 Populus trichocarpa HOM05D003627 ORTHO05D004307 3.8e-45 184.9 122 73.0
CDE10G0960 Ceratophyllum demersum HOM05D003627 ORTHO05D004307 5.0e-45 184.5 123 73.2
Glyma.17G208000 Glycine max HOM05D003627 ORTHO05D004307 5.0e-45 184.5 122 73.8
Solyc08g067020.4 Solanum lycopersicum HOM05D003627 ORTHO05D004307 6.5e-45 184.1 124 71.8
AT4G32470 Arabidopsis thaliana HOM05D003627 ORTHO05D004307 1.1e-44 183.3 122 74.6
MELO3C003682.2 Cucumis melo HOM05D003627 ORTHO05D004307 1.1e-44 183.3 122 72.1
ECA236G1938 Erigeron canadensis HOM05D003627 ORTHO05D004307 1.1e-44 183.3 123 72.4
PGSC0003DMG400029087 Solanum tuberosum HOM05D003627 ORTHO05D004307 1.1e-44 183.3 124 71.8
THA.LOC104803827 Tarenaya hassleriana HOM05D003627 ORTHO05D004307 1.1e-44 183.3 122 73.0
MSTRG.11762 Avicennia marina HOM05D003627 ORTHO05D004307 1.4e-44 183.0 124 72.6
Ca_12928_v3 Cicer arietinum L. HOM05D003627 ORTHO05D004307 1.4e-44 183.0 122 73.0
Thhalv10026575m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 1.4e-44 183.0 122 75.4
Medtr1g011880 Medicago truncatula HOM05D003627 ORTHO05D004307 1.4e-44 183.0 122 73.0
Oeu031576.1 Olea europaea HOM05D003627 ORTHO05D004307 1.4e-44 183.0 124 72.6
Sopen08g020960 Solanum pennellii HOM05D003627 ORTHO05D004307 1.4e-44 183.0 124 71.0
C03p87330 Brassica napus HOM05D003627 ORTHO05D004307 1.9e-44 182.6 122 73.8
Lsat_1_v5_gn_7_42641 Lactuca sativa HOM05D003627 ORTHO05D004307 1.9e-44 182.6 122 73.0
Carub.0007s0811 Capsella rubella HOM05D003627 ORTHO05D004307 2.5e-44 182.2 122 73.8
Migut.E01481 Erythranthe guttata HOM05D003627 ORTHO05D004307 3.2e-44 181.8 124 70.2
Aqoxy7G02033 Aquilegia oxysepala HOM05D003627 ORTHO05D004307 4.2e-44 181.4 120 74.2
BcaC09g52038 Brassica carinata HOM05D003627 ORTHO05D004307 4.2e-44 181.4 122 73.8
A08p18170 Brassica napus HOM05D003627 ORTHO05D004307 4.2e-44 181.4 122 73.8
BraA08t33770Z Brassica rapa HOM05D003627 ORTHO05D004307 4.2e-44 181.4 122 73.8
Phvul.001G121500 Phaseolus vulgaris HOM05D003627 ORTHO05D004307 4.2e-44 181.4 122 73.0
Sp7g30260 Schrenkiella parvula HOM05D003627 ORTHO05D004307 4.2e-44 181.4 122 73.8
Lsat_1_v5_gn_8_57600 Lactuca sativa HOM05D003627 ORTHO05D004307 5.5e-44 181.0 122 72.1
CARHR115730 Cardamine hirsuta HOM05D003627 ORTHO05D004307 7.2e-44 180.6 122 73.0
Sp4g05010 Schrenkiella parvula HOM05D003627 ORTHO05D004307 7.2e-44 180.6 122 73.0
MSTRG.13989 Avicennia marina HOM05D003627 ORTHO05D004307 9.4e-44 180.3 124 71.0
BcaC01g01021 Brassica carinata HOM05D003627 ORTHO05D004307 1.2e-43 179.9 122 73.0
BolC3t21033H Brassica oleracea HOM05D003627 ORTHO05D004307 1.2e-43 179.9 122 73.0
A01p05900 Brassica napus HOM05D003627 ORTHO05D004307 2.1e-43 179.1 122 73.0
Thhalv10023759m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 2.1e-43 179.1 122 73.0
AUR62024869 Chenopodium quinoa HOM05D003627 ORTHO05D004307 2.7e-43 178.7 123 73.2
Sed0003789 Sechium edule HOM05D003627 ORTHO05D004307 2.7e-43 178.7 121 71.1
BcaB03g12747 Brassica carinata HOM05D003627 ORTHO05D004307 3.6e-43 178.3 122 72.1
CARHR240390 Cardamine hirsuta HOM05D003627 ORTHO05D004307 3.6e-43 178.3 122 72.1
CsaV3_3G046570 Cucumis sativus L. HOM05D003627 ORTHO05D004307 3.6e-43 178.3 122 69.7
TPR.G15658 Trifolium pratense HOM05D003627 ORTHO05D004307 3.6e-43 178.3 122 70.5
BraA01t00557Z Brassica rapa HOM05D003627 ORTHO05D004307 4.6e-43 177.9 122 72.1
Cc11_g01730 Coffea canephora HOM05D003627 ORTHO05D004307 4.6e-43 177.9 122 71.3
HPP92_001612 Vanilla planifolia HOM05D003627 ORTHO05D004307 4.6e-43 177.9 122 72.1
Zm00001eb094460 Zea mays HOM05D003627 ORTHO05D004307 4.6e-43 177.9 124 72.6
Psat6g030080 Pisum sativum HOM05D003627 ORTHO05D004307 1.4e-42 176.4 122 68.9
unitig_748.g8200 Utricularia gibba HOM05D003627 ORTHO05D004307 1.4e-42 176.4 124 71.8
HPP92_000819 Vanilla planifolia HOM05D003627 ORTHO05D004307 1.4e-42 176.4 115 75.7
SGA_v2.0_scaffold169G38619 Striga asiatica HOM05D003627 ORTHO05D004307 1.8e-42 176.0 144 63.9
C01p06520 Brassica napus HOM05D003627 ORTHO05D004307 3.0e-42 175.3 122 71.3
BolC1t00646H Brassica oleracea HOM05D003627 ORTHO05D004307 3.0e-42 175.3 122 71.3
Os07g0205000 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 3.9e-42 174.9 124 72.6
arahy.Tifrunner.gnm1.ann1.J127JW Arachis hypogaea HOM05D003627 ORTHO05D004307 6.7e-42 174.1 160 58.1
unitig_32.g10929 Utricularia gibba HOM05D003627 ORTHO05D004307 8.8e-42 173.7 124 70.2
AL7G19340 Arabidopsis lyrata HOM05D003627 ORTHO05D004307 1.1e-41 173.3 138 65.9
Zm00001eb212550 Zea mays HOM05D003627 ORTHO05D004307 9.7e-41 170.2 124 69.4
Peaxi162Scf00361g00612 Petunia axillaris HOM05D003627 ORTHO05D004307 4.8e-40 167.9 123 66.7
Glyma.14G126300 Glycine max HOM05D003627 ORTHO05D004307 1.8e-39 166.0 111 73.0
TAR636G0318 Trochodendron aralioides HOM05D003627 ORTHO05D004307 1.8e-39 166.0 115 68.7
Zm00001eb061560 Zea mays HOM05D003627 ORTHO05D004307 2.4e-39 165.6 124 66.9
Os03g0806900 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 5.3e-39 164.5 124 67.7
BraA02t08939Z Brassica rapa HOM05D003627 ORTHO05D004307 2.9e-37 158.7 104 74.0
Nn8g39358 Nelumbo nucifera HOM05D003627 ORTHO05D004307 2.9e-37 158.7 110 70.0
Ciclev10009887m.g Citrus clementina HOM05D003627 ORTHO05D004307 6.5e-37 157.5 100 76.0
Gorai.013G110700 Gossypium raimondii HOM05D003627 ORTHO05D004307 8.5e-37 157.1 100 75.0
BolC2t12016H Brassica oleracea HOM05D003627 ORTHO05D004307 1.1e-36 156.8 102 74.5
QL02p023157 Quercus lobata HOM05D003627 ORTHO05D004307 2.5e-36 155.6 100 72.0
Actinidia14624 Actinidia chinensis HOM05D003627 ORTHO05D004307 4.2e-36 154.8 100 74.0
SGA_v2.0_scaffold18G08283 Striga asiatica HOM05D003627 ORTHO05D004307 7.2e-36 154.1 196 45.9
Sabra06G0195600 Salix brachista HOM05D003627 ORTHO05D004307 1.2e-35 153.3 104 69.2
SGA_v2.0_scaffold22G09938 Striga asiatica HOM05D003627 ORTHO05D004307 1.2e-35 153.3 124 64.5
Gohir.D03G071300 Gossypium hirsutum HOM05D003627 ORTHO05D004307 2.1e-35 152.5 100 73.0
TWI32G0136 Tripterygium wilfordii HOM05D003627 ORTHO05D004307 2.7e-35 152.1 122 65.6
Actinidia13260 Actinidia chinensis HOM05D003627 ORTHO05D004307 3.6e-35 151.8 101 71.3
DCAR_003029 Daucus carota HOM05D003627 ORTHO05D004307 3.6e-35 151.8 138 59.4
Dinv30181 Davidia involucrata HOM05D003627 ORTHO05D004307 3.6e-35 151.8 101 70.3
SEGI_30503 Sequoiadendron giganteum HOM05D003627 ORTHO05D004307 4.7e-35 151.4 110 69.1
Sc09g0008620 Simmondsia chinensis HOM05D003627 ORTHO05D004307 6.1e-35 151.0 96 77.1
Hund03017 Selenicereus undatus HOM05D003627 ORTHO05D004307 1.4e-34 149.8 100 73.0
Sc06g0000590 Simmondsia chinensis HOM05D003627 ORTHO05D004307 1.4e-34 149.8 100 73.0
TAR625G0096 Trochodendron aralioides HOM05D003627 ORTHO05D004307 1.4e-34 149.8 100 71.0
Aa31LG2G19380 Aethionema arabicum HOM05D003627 ORTHO05D004307 2.3e-34 149.1 100 72.0
arahy.Tifrunner.gnm1.ann1.8QVL0P Arachis hypogaea HOM05D003627 ORTHO05D004307 6.7e-34 147.5 162 51.9
TWI34G0954 Tripterygium wilfordii HOM05D003627 ORTHO05D004307 1.5e-33 146.4 122 63.1
Ah.10g026040 Amaranthus hybridus HOM05D003627 ORTHO05D004307 2.0e-33 146.0 221 41.6
QL02p087302 Quercus lobata HOM05D003627 ORTHO05D004307 2.2e-32 142.5 97 69.1
AagrBONN_evm.TU.Sc2ySwM_344.1095 Anthoceros agrestis HOM05D003627 ORTHO05D004307 3.7e-32 141.7 124 61.3
SalBow4G0188 Salvia bowleyana HOM05D003627 ORTHO05D004307 2.6e-30 135.6 98 65.3
vmacro05197 Vaccinium macrocarpon HOM05D003627 ORTHO05D004307 2.9e-29 132.1 85 74.1
Rhsim02G0194100 Rhododendron simsii HOM05D003627 ORTHO05D004307 8.5e-29 130.6 85 72.9
Haze_21577 Corylus avellana HOM05D003627 ORTHO05D004307 2.5e-28 129.0 83 73.5
Gohir.1Z049369 Gossypium hirsutum HOM05D003627 ORTHO05D004307 4.2e-28 128.3 100 64.0
HanXRQChr06g0182081 Helianthus annuus HOM05D003627 ORTHO05D004307 7.2e-28 127.5 79 83.5
Oeu030075.1 Olea europaea HOM05D003627 ORTHO05D004307 1.2e-27 126.7 85 70.6
Pp3c6_18020 Physcomitrium patens HOM05D003627 ORTHO05D004307 1.2e-27 126.7 123 55.3
Ah.10g026070 Amaranthus hybridus HOM05D003627 ORTHO05D004307 1.6e-27 126.3 84 71.4
Pp3c25_1520 Physcomitrium patens HOM05D003627 ORTHO05D004307 3.6e-27 125.2 123 53.7
Mapoly0020s0108 Marchantia polymorpha HOM05D003627 ORTHO05D004307 6.1e-27 124.4 124 54.8
SalBow8G5246 Salvia bowleyana HOM05D003627 ORTHO05D004307 2.3e-26 122.5 85 68.2
SalBow8G5369 Salvia bowleyana HOM05D003627 ORTHO05D004307 2.3e-26 122.5 85 68.2
CBR_g8907 Chara braunii HOM05D003627 ORTHO05D004307 3.0e-26 122.1 120 52.5
Pp3c10_14460 Physcomitrium patens HOM05D003627 ORTHO05D004307 3.0e-26 122.1 109 55.0
PRCOL_00006283 Prasinoderma coloniale HOM05D003627 ORTHO05D004307 3.0e-26 122.1 113 55.8
SMO169G0058 Selaginella moellendorffii HOM05D003627 ORTHO05D004307 1.5e-25 119.8 118 53.4
MBI04_g38347_MAGBIO Magnolia biondii HOM05D003627 ORTHO05D004307 1.4e-23 113.2 76 73.7
MCO05G573 Micromonas commoda HOM05D003627 ORTHO05D004307 2.4e-23 112.5 124 51.6
Cre06.g262700 Chlamydomonas reinhardtii HOM05D003627 ORTHO05D004307 1.7e-21 106.3 118 50.0
Nn1g01248 Nelumbo nucifera HOM05D001793 ORTHO05D001938 1.7e-21 106.3 98 54.1
Nitab4.5_0000010g0100 Nicotiana tabacum HOM05D003627 ORTHO05D004307 1.7e-21 106.3 103 52.4
Os08g0246400 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 5.5e-20 101.3 99 56.6
AUR62030679 Chenopodium quinoa HOM05D003627 ORTHO05D004307 4.8e-16 88.2 84 57.1
CAN.G536.8 Capsicum annuum HOM05D003627 ORTHO05D001832 5.4e-15 84.7 81 59.3
SGA_v2.0_scaffold399G50806 Striga asiatica HOM05D005821 ORTHO05D006649 1.3e-13 80.1 67 58.2
Ah.10g026060 Amaranthus hybridus HOM05D003627 ORTHO05D004307 1.5e-09 66.6 38 84.2
DCAR_029199 Daucus carota HOM05D003627 ORTHO05D004307 4.4e-09 65.1 38 81.6
PGR044G2108 Punica granatum HOM05D007797 ORTHO05D009741 4.4e-09 65.1 84 47.6
CiPaw.03G239400 Carya illinoinensis HOM05D003627 ORTHO05D004307 4.9e-08 61.6 43 58.1
CAN.G538.10 Capsicum annuum HOM05D003627 ORTHO05D000766 4.1e-07 58.5 43 67.4
CARHR187770 Cardamine hirsuta HOM05D003627 ORTHO05D004307 3.5e-06 55.5 49 59.2
EL10Ac2g02580 Beta vulgaris HOM05D003627 ORTHO05D004307 4.5e-06 55.1 59 54.2


User provided reference genes

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