Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 1.0e-105 386.7 190 100.0
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 3.2e-104 381.7 190 97.9
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.7e-74 282.3 190 74.2
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 4.6e-74 281.6 190 73.2
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.3e-73 280.0 190 70.5
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 8.6e-73 277.3 189 70.9
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.1e-72 276.9 190 71.1
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.1e-72 276.9 190 71.6
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 1.5e-72 276.6 190 72.6
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.1e-71 272.7 195 69.2
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.1e-70 270.4 190 70.0
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 3.1e-70 268.9 196 69.9
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 6.8e-70 267.7 190 71.1
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 8.9e-70 267.3 197 68.0
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 2.0e-69 266.2 190 65.8
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 2.6e-69 265.8 190 67.4
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 9.9e-69 263.8 190 70.0
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 9.9e-69 263.8 190 69.5
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.3e-68 263.5 195 66.7
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.7e-68 263.1 190 67.9
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.2e-68 262.7 190 67.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 2.2e-68 262.7 196 69.9
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 2.2e-68 262.7 190 68.9
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 2.9e-68 262.3 190 66.8
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 2.9e-68 262.3 196 68.9
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 3.7e-68 261.9 196 69.4
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 3.7e-68 261.9 190 68.4
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 4.9e-68 261.5 190 66.3
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 6.4e-68 261.2 190 67.4
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.1e-67 260.4 190 68.9
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.1e-67 260.4 191 69.1
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 1.4e-67 260.0 190 65.8
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.4e-67 260.0 190 68.9
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.9e-67 259.6 190 66.3
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.9e-67 259.6 192 67.2
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 2.4e-67 259.2 190 66.3
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 2.4e-67 259.2 190 66.3
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.4e-67 259.2 190 66.8
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 3.2e-67 258.8 187 69.0
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.2e-67 258.8 192 66.7
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 4.1e-67 258.5 190 65.3
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 5.4e-67 258.1 187 68.4
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 5.4e-67 258.1 191 68.6
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 7.1e-67 257.7 190 65.8
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 9.2e-67 257.3 189 68.3
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.2e-66 256.9 191 67.0
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.6e-66 256.5 190 68.4
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 1.6e-66 256.5 190 65.8
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 2.7e-66 255.8 190 65.3
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 3.5e-66 255.4 192 66.1
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 3.5e-66 255.4 200 65.5
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 4.6e-66 255.0 190 63.2
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 6.0e-66 254.6 189 67.7
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 7.8e-66 254.2 190 64.2
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 7.8e-66 254.2 195 67.7
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.0e-65 253.8 190 66.8
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.3e-65 253.4 193 65.3
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.7e-65 253.1 193 65.3
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 2.3e-65 252.7 191 66.0
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 3.0e-65 252.3 190 64.2
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 1.9e-64 249.6 200 63.5
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 3.3e-64 248.8 190 63.7
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 4.3e-64 248.4 196 63.8
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 4.3e-64 248.4 191 64.4
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 4.3e-64 248.4 190 63.2
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 2.8e-63 245.7 190 64.2
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 6.2e-63 244.6 186 64.5
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 6.2e-63 244.6 224 56.7
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 6.2e-63 244.6 192 64.1
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 8.1e-63 244.2 190 64.2
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 8.1e-63 244.2 190 64.2
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.1e-62 243.8 190 63.2
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 1.4e-62 243.4 184 66.8
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 5.2e-62 241.5 192 63.5
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 6.8e-62 241.1 193 64.2
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 6.8e-62 241.1 190 64.2
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 2.6e-61 239.2 189 65.1
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.4e-61 238.8 162 74.7
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 7.6e-61 237.7 192 63.0
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 1.1e-59 233.8 189 64.0
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 2.4e-59 232.6 252 51.6
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 7.1e-59 231.1 142 80.3
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 3.5e-58 228.8 191 62.3
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 4.6e-58 228.4 189 62.4
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 4.6e-58 228.4 189 62.4
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 4.6e-58 228.4 160 69.4
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.3e-57 226.9 189 61.9
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.7e-57 226.5 189 61.9
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.0e-57 225.7 176 65.3
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 5.1e-57 224.9 191 60.7
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 2.1e-55 219.5 190 63.2
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 8.1e-55 217.6 146 69.2
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.1e-54 217.2 191 63.4
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 2.2e-52 209.5 145 69.0
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 3.8e-52 208.8 154 64.3
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 6.4e-52 208.0 162 63.6
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.4e-51 206.8 143 69.9
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 6.0e-50 201.4 152 64.5
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 9.0e-46 187.6 157 60.5
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 1.6e-42 176.8 181 47.5
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 8.7e-41 171.0 190 50.0
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 8.7e-41 171.0 191 52.9
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 1.4e-38 163.7 135 58.5
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 1.3e-33 147.1 190 45.3
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.4e-30 137.1 162 46.3
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.6e-29 132.9 103 60.2
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 6.5e-28 128.3 88 68.2
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 8.4e-28 127.9 160 40.6
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.5e-27 125.2 96 62.5
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.6e-26 123.6 90 68.9
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 2.1e-26 123.2 96 59.4
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.9e-24 116.7 165 37.6
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.9e-20 102.8 75 61.3
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.9e-20 102.8 67 80.6
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 1.1e-19 100.9 140 34.3
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 3.2e-19 99.4 88 62.5
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.5e-16 89.7 100 52.0
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.7e-12 77.0 95 35.8
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 7.9e-10 68.2 47 66.0
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 1.4e-06 57.4 46 69.6


User provided reference genes

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