Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO447G0361 Papaver somniferum HOM05D003288 ORTHO05D003734 6.5e-132 474.2 256 100.0
PSO210G4855 Papaver somniferum HOM05D003288 ORTHO05D003734 3.9e-121 438.3 256 88.7
Nn5g28678 Nelumbo nucifera HOM05D003288 ORTHO05D003734 2.1e-66 256.5 246 54.5
Haze_14295 Corylus avellana HOM05D003288 ORTHO05D003734 1.5e-59 233.8 251 49.8
CDE06G2565 Ceratophyllum demersum HOM05D003288 ORTHO05D003734 4.3e-59 232.3 254 46.9
SalBow4G2398 Salvia bowleyana HOM05D003288 ORTHO05D003734 9.5e-59 231.1 252 46.4
Cpa.g.sc116.89 Carica papaya HOM05D003288 ORTHO05D003734 8.1e-58 228.0 249 46.2
MD09G1266100 Malus domestica HOM05D003288 ORTHO05D003734 8.1e-58 228.0 247 49.4
Ciclev10011340m.g Citrus clementina HOM05D003288 ORTHO05D003734 2.4e-57 226.5 249 48.6
TAR623G0700 Trochodendron aralioides HOM05D003288 ORTHO05D003734 6.8e-57 224.9 245 51.0
DCAR_030537 Daucus carota HOM05D003288 ORTHO05D003734 2.0e-56 223.4 253 48.2
ECA238G4239 Erigeron canadensis HOM05D003288 ORTHO05D003734 2.2e-55 219.9 249 47.4
Sed0014607 Sechium edule HOM05D003288 ORTHO05D003734 2.2e-55 219.9 249 47.4
Nn4g23260 Nelumbo nucifera HOM05D003288 ORTHO05D003734 3.8e-55 219.2 246 50.0
CsaV3_4G000640 Cucumis sativus L. HOM05D003288 ORTHO05D003734 4.9e-55 218.8 248 52.0
COL.COLO4_06958 Corchorus olitorius HOM05D003288 ORTHO05D003734 1.1e-54 217.6 251 45.8
CSS0016947 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 1.9e-54 216.9 209 52.6
Dinv28220 Davidia involucrata HOM05D003288 ORTHO05D003734 3.2e-54 216.1 254 46.9
MELO3C017972.2 Cucumis melo HOM05D003288 ORTHO05D003734 5.4e-54 215.3 249 52.2
ClCG10G010670 Citrullus lanatus HOM05D003288 ORTHO05D003734 7.1e-54 214.9 248 48.8
Lj7A364T81 Lonicera japonica HOM05D003288 ORTHO05D003734 1.2e-53 214.2 249 53.0
GSVIVG01030016001 Vitis vinifera HOM05D003288 ORTHO05D003734 1.6e-53 213.8 248 48.0
CDE07G0160 Ceratophyllum demersum HOM05D003288 ORTHO05D003734 6.0e-53 211.8 221 48.4
Aqoxy2G03361 Aquilegia oxysepala HOM05D003288 ORTHO05D003734 7.8e-53 211.5 246 45.9
PGSC0003DMG400000983 Solanum tuberosum HOM05D003288 ORTHO05D003734 7.8e-53 211.5 245 44.9
TAR629G0745 Trochodendron aralioides HOM05D003288 ORTHO05D003734 7.8e-53 211.5 246 48.4
arahy.Tifrunner.gnm1.ann1.F6RFY9 Arachis hypogaea HOM05D003288 ORTHO05D003734 2.3e-52 209.9 247 47.0
arahy.Tifrunner.gnm1.ann1.G6QY2G Arachis hypogaea HOM05D003288 ORTHO05D003734 2.3e-52 209.9 247 47.0
Solyc11g006310.2 Solanum lycopersicum HOM05D003288 ORTHO05D003734 3.9e-52 209.1 245 44.5
Lsat_1_v5_gn_4_26961 Lactuca sativa HOM05D003288 ORTHO05D003734 8.7e-52 208.0 249 45.8
Rhsim10G0182400 Rhododendron simsii HOM05D003288 ORTHO05D003734 1.1e-51 207.6 204 51.0
Manes.02G079400 Manihot esculenta HOM05D003288 ORTHO05D003734 4.3e-51 205.7 253 42.7
Oeu009426.1 Olea europaea HOM05D003288 ORTHO05D003734 1.2e-50 204.1 250 44.8
Aqoxy3G02762 Aquilegia oxysepala HOM05D003288 ORTHO05D003734 2.8e-50 203.0 251 44.6
Duzib268G1591 Durio zibethinus HOM05D003288 ORTHO05D003734 2.8e-50 203.0 246 42.7
TPR.G8950 Trifolium pratense HOM05D003288 ORTHO05D003734 2.8e-50 203.0 252 43.7
AUR62004111 Chenopodium quinoa HOM05D003288 ORTHO05D003734 4.7e-50 202.2 249 43.0
AUR62023637 Chenopodium quinoa HOM05D003288 ORTHO05D003734 6.2e-50 201.8 255 42.7
PSO210G3953 Papaver somniferum HOM05D003288 ORTHO05D003734 8.1e-50 201.4 147 68.7
Lsat_1_v5_gn_3_104940 Lactuca sativa HOM05D003288 ORTHO05D003734 2.4e-49 199.9 248 48.4
QL01p032763 Quercus lobata HOM05D003288 ORTHO05D003734 4.0e-49 199.1 251 44.2
Thecc.04G002400 Theobroma cacao HOM05D003288 ORTHO05D003734 5.3e-49 198.7 253 41.1
CAN.G1256.15 Capsicum annuum HOM05D003288 ORTHO05D003734 6.9e-49 198.4 254 41.3
AUR62035243 Chenopodium quinoa HOM05D003288 ORTHO05D003734 9.0e-49 198.0 249 42.2
Lj2g0015416 Lotus japonicus HOM05D003288 ORTHO05D003734 9.0e-49 198.0 250 41.2
Lalb_Chr05g0212271 Lupinus albus HOM05D003288 ORTHO05D003734 1.2e-48 197.6 270 42.6
Cfa007776 Carpinus fangiana HOM05D003288 ORTHO05D003734 1.5e-48 197.2 251 44.2
AUR62017809 Chenopodium quinoa HOM05D003288 ORTHO05D003734 1.5e-48 197.2 247 41.7
Cc02_g09200 Coffea canephora HOM05D003288 ORTHO05D003734 2.0e-48 196.8 230 45.7
MBI13_g04499_MAGBIO Magnolia biondii HOM05D003288 ORTHO05D003734 2.0e-48 196.8 249 45.4
QL01p003767 Quercus lobata HOM05D003288 ORTHO05D003734 2.6e-48 196.4 251 44.6
AUR62007625 Chenopodium quinoa HOM05D003288 ORTHO05D003734 3.4e-48 196.1 252 42.1
Medtr2g093230 Medicago truncatula HOM05D003288 ORTHO05D003734 4.4e-48 195.7 250 42.4
PSO210G3300 Papaver somniferum HOM05D003288 ORTHO05D003734 5.8e-48 195.3 137 70.1
PGR083G1244 Punica granatum HOM05D003288 ORTHO05D003734 5.8e-48 195.3 248 43.5
MBI13_g04500_MAGBIO Magnolia biondii HOM05D003288 ORTHO05D003734 1.3e-47 194.1 249 44.6
TAR629G1838 Trochodendron aralioides HOM05D003288 ORTHO05D003734 1.3e-47 194.1 246 45.9
Ca_03338_v3 Cicer arietinum L. HOM05D003288 ORTHO05D003734 1.7e-47 193.7 250 44.4
VMungo1383G3441 Vigna mungo HOM05D003288 ORTHO05D003734 2.9e-47 193.0 246 43.9
Lj2C515T4 Lonicera japonica HOM05D003288 ORTHO05D003734 3.8e-47 192.6 226 46.0
Prupe.3G163900 Prunus persica HOM05D003288 ORTHO05D003734 3.8e-47 192.6 187 51.3
FvH4_6g33230 Fragaria vesca HOM05D003288 ORTHO05D003734 4.9e-47 192.2 238 44.5
Phvul.001G228800 Phaseolus vulgaris HOM05D003288 ORTHO05D003734 6.4e-47 191.8 250 41.2
SGA_v2.0_scaffold96G29122 Striga asiatica HOM05D003288 ORTHO05D003734 8.4e-47 191.4 254 40.2
CSS0026322 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 7.1e-46 188.3 216 45.8
QL02p059844 Quercus lobata HOM05D003288 ORTHO05D003734 9.3e-46 188.0 251 42.6
ECA240G3548 Erigeron canadensis HOM05D003288 ORTHO05D003734 3.5e-45 186.0 247 43.3
Lj5g0021383 Lotus japonicus HOM05D003288 ORTHO05D003734 3.5e-45 186.0 229 43.2
SHI30119 Sapria himalayana HOM05D003288 ORTHO05D003734 3.5e-45 186.0 238 43.3
Lalb_Chr15g0085041 Lupinus albus HOM05D003288 ORTHO05D003734 4.6e-45 185.7 252 41.3
Carub.0008s1584 Capsella rubella HOM05D003288 ORTHO05D003734 6.0e-45 185.3 246 40.2
Migut.A00479 Erythranthe guttata HOM05D003288 ORTHO05D003734 6.0e-45 185.3 240 40.8
Glyma.17G080975 Glycine max HOM05D003288 ORTHO05D003734 7.8e-45 184.9 246 40.7
AL8G31020 Arabidopsis lyrata HOM05D003288 ORTHO05D003734 1.3e-44 184.1 245 39.6
arahy.Tifrunner.gnm1.ann1.BXR7J4 Arachis hypogaea HOM05D003288 ORTHO05D003734 2.3e-44 183.3 252 42.1
Gohir.A12G143700 Gossypium hirsutum HOM05D003288 ORTHO05D003734 2.3e-44 183.3 251 42.6
Potri.017G137100 Populus trichocarpa HOM05D003288 ORTHO05D003734 2.3e-44 183.3 190 49.5
EL10As8g23882 Beta vulgaris HOM05D003288 ORTHO05D003734 3.9e-44 182.6 249 40.2
Psat1g016080 Pisum sativum HOM05D003288 ORTHO05D003734 3.9e-44 182.6 143 58.7
DCAR_014148 Daucus carota HOM05D003288 ORTHO05D003734 1.1e-43 181.0 221 43.0
Thecc.04G002200 Theobroma cacao HOM05D003288 ORTHO05D003734 1.1e-43 181.0 249 44.6
FAN14G0969 Fragaria x ananassa HOM05D003288 ORTHO05D003734 1.5e-43 180.6 287 39.4
HanXRQChr13g0424601 Helianthus annuus HOM05D003288 ORTHO05D003734 1.5e-43 180.6 142 60.6
TWI74G0189 Tripterygium wilfordii HOM05D003288 ORTHO05D003734 1.5e-43 180.6 248 40.7
arahy.Tifrunner.gnm1.ann1.NZ46DJ Arachis hypogaea HOM05D003288 ORTHO05D003734 1.9e-43 180.3 252 41.3
TPR.G37900 Trifolium pratense HOM05D003288 ORTHO05D003734 1.9e-43 180.3 267 39.7
unitig_748.g8456 Utricularia gibba HOM05D003288 ORTHO05D003734 1.9e-43 180.3 247 42.5
Medtr2g063863 Medicago truncatula HOM05D003288 ORTHO05D003734 3.3e-43 179.5 143 57.3
Sc18g0007110 Simmondsia chinensis HOM05D003288 ORTHO05D003734 3.3e-43 179.5 249 39.4
ECA240G0593 Erigeron canadensis HOM05D003288 ORTHO05D003734 4.3e-43 179.1 181 53.6
Medtr2g063920 Medicago truncatula HOM05D003288 ORTHO05D003734 7.3e-43 178.3 215 45.6
Eucgr.F02892 Eucalyptus grandis HOM05D003288 ORTHO05D003734 9.6e-43 177.9 137 62.8
Sabra17G0111800 Salix brachista HOM05D003288 ORTHO05D003734 9.6e-43 177.9 186 48.4
Sabra17G0111500 Salix brachista HOM05D003288 ORTHO05D003734 1.3e-42 177.6 186 48.4
ECA234G0526 Erigeron canadensis HOM05D003288 ORTHO05D003734 1.6e-42 177.2 211 51.7
RcHm_v2.0_Chr2g0142951 Rosa chinensis HOM05D003288 ORTHO05D003734 1.6e-42 177.2 179 50.8
Nitab4.5_0002640g0060 Nicotiana tabacum HOM05D003288 ORTHO05D003734 3.6e-42 176.0 257 39.3
Rhsim12G0111000 Rhododendron simsii HOM05D003288 ORTHO05D003734 3.6e-42 176.0 249 44.6
vmacro23304 Vaccinium macrocarpon HOM05D003288 ORTHO05D003734 4.8e-42 175.6 171 50.3
Medtr6g091980 Medicago truncatula HOM05D003288 ORTHO05D003734 6.2e-42 175.3 143 55.9
Ah.03g141820 Amaranthus hybridus HOM05D003288 ORTHO05D003734 8.1e-42 174.9 200 45.0
Sabra17G0114500 Salix brachista HOM05D003288 ORTHO05D003734 1.1e-41 174.5 182 48.4
Medtr2g063823 Medicago truncatula HOM05D003288 ORTHO05D003734 1.4e-41 174.1 143 55.2
HanXRQChr03g0092531 Helianthus annuus HOM05D003288 ORTHO05D003734 1.8e-41 173.7 141 60.3
Hund06475 Selenicereus undatus HOM05D003288 ORTHO05D003734 1.8e-41 173.7 212 39.6
Glyma.11G214200 Glycine max HOM05D003288 ORTHO05D003734 3.1e-41 172.9 141 56.0
Thhalv10015474m.g Eutrema salsugineum HOM05D003288 ORTHO05D003734 4.0e-41 172.6 246 38.6
Psat0s1991g0080 Pisum sativum HOM05D003288 ORTHO05D003734 9.0e-41 171.4 143 55.2
Glyma.18G042400 Glycine max HOM05D003288 ORTHO05D003734 1.5e-40 170.6 214 43.5
Lsat_1_v5_gn_3_125960 Lactuca sativa HOM05D003288 ORTHO05D003734 1.5e-40 170.6 132 59.8
CANSAT64G0297 Cannabis sativa HOM05D003288 ORTHO05D003734 3.4e-40 169.5 251 40.2
Glyma.05G018700 Glycine max HOM05D003288 ORTHO05D003734 9.9e-40 167.9 211 42.7
FAN09G4788 Fragaria x ananassa HOM05D003288 ORTHO05D003734 6.4e-39 165.2 289 36.7
BraA10t43361Z Brassica rapa HOM05D003288 ORTHO05D003734 8.4e-39 164.9 245 36.7
FvH4_6g41730 Fragaria vesca HOM05D003288 ORTHO05D003734 1.4e-38 164.1 211 42.2
Actinidia17186 Actinidia chinensis HOM05D003288 ORTHO05D003734 2.4e-38 163.3 152 52.6
FAN05G3577 Fragaria x ananassa HOM05D003288 ORTHO05D003734 2.4e-38 163.3 289 36.7
Gohir.D12G148400 Gossypium hirsutum HOM05D003288 ORTHO05D003734 2.4e-38 163.3 240 41.2
Prupe.3G204300 Prunus persica HOM05D003288 ORTHO05D003734 3.2e-38 162.9 247 41.7
FAN02G3499 Fragaria x ananassa HOM05D003288 ORTHO05D003734 5.4e-38 162.2 209 42.6
THA.LOC104805978 Tarenaya hassleriana HOM05D003288 ORTHO05D003734 5.4e-38 162.2 198 48.0
Os09g0442400 Oryza sativa ssp. japonica HOM05D003288 ORTHO05D003734 7.1e-38 161.8 247 40.1
Zm00001eb314230 Zea mays HOM05D003288 ORTHO05D003734 9.3e-38 161.4 247 38.9
ATR0598G225 Amborella trichopoda HOM05D003288 ORTHO05D003734 1.2e-37 161.0 311 38.9
AT5G55490 Arabidopsis thaliana HOM05D003288 ORTHO05D003734 3.5e-37 159.5 245 36.7
MD17G1110600 Malus domestica HOM05D003288 ORTHO05D003734 4.6e-37 159.1 248 37.5
HPP92_013124 Vanilla planifolia HOM05D003288 ORTHO05D003734 7.9e-37 158.3 144 52.1
Rhsim10G0181900 Rhododendron simsii HOM05D003288 ORTHO05D003734 2.3e-36 156.8 123 59.3
Ah.02g124870 Amaranthus hybridus HOM05D003288 ORTHO05D003734 6.7e-36 155.2 204 41.2
C03p16470 Brassica napus HOM05D003288 ORTHO05D003734 8.7e-36 154.8 245 42.9
BolC3t14067H Brassica oleracea HOM05D003288 ORTHO05D003734 1.1e-35 154.5 245 42.9
BraA03t10702Z Brassica rapa HOM05D003288 ORTHO05D003734 1.1e-35 154.5 245 42.4
CARHR268800 Cardamine hirsuta HOM05D003288 ORTHO05D003734 5.6e-35 152.1 177 41.8
QL09p034880 Quercus lobata HOM05D003288 ORTHO05D003734 7.4e-35 151.8 250 41.2
THA.LOC109115998 Tarenaya hassleriana HOM05D003288 ORTHO05D003734 7.4e-35 151.8 177 50.8
A03p14030 Brassica napus HOM05D003288 ORTHO05D003734 2.1e-34 150.2 245 41.2
Duzib138G1645 Durio zibethinus HOM05D003288 ORTHO05D003734 3.7e-34 149.4 142 48.6
Peaxi162Scf00039g01122 Petunia axillaris HOM05D003288 ORTHO05D003734 3.7e-34 149.4 245 37.1
HanXRQChr03g0092541 Helianthus annuus HOM05D003288 ORTHO05D003734 2.4e-33 146.7 117 57.3
Atru.chr6.3343 Acer truncatum HOM05D003288 ORTHO05D003734 5.3e-33 145.6 142 49.3
CSS0043791 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 5.3e-33 145.6 180 45.0
Aa31LG2G2840 Aethionema arabicum HOM05D003288 ORTHO05D003734 1.2e-32 144.4 194 43.8
Haze_12714 Corylus avellana HOM05D003288 ORTHO05D003734 3.4e-32 142.9 143 49.0
SEGI_20345 Sequoiadendron giganteum HOM05D003288 ORTHO05D003734 4.5e-32 142.5 146 43.8
Nitab4.5_0001781g0030 Nicotiana tabacum HOM05D003288 ORTHO05D003734 9.9e-32 141.4 247 33.6
A10p12610 Brassica napus HOM05D003288 ORTHO05D003734 1.1e-30 137.9 122 50.0
FAN14G3219 Fragaria x ananassa HOM05D003288 ORTHO05D003734 1.1e-30 137.9 238 36.1
BcaB08g35905 Brassica carinata HOM05D003288 ORTHO05D003734 3.2e-30 136.3 123 49.6
BcaNung05847 Brassica carinata HOM05D003288 ORTHO05D003734 3.2e-30 136.3 123 49.6
C09p46140 Brassica napus HOM05D003288 ORTHO05D003734 3.2e-30 136.3 123 49.6
BolC9t57480H Brassica oleracea HOM05D003288 ORTHO05D003734 3.2e-30 136.3 123 49.6
A10p16000 Brassica napus HOM05D003288 ORTHO05D003734 2.1e-29 133.7 141 46.1
Os07g0668100 Oryza sativa ssp. japonica HOM05D003288 ORTHO05D003734 2.1e-29 133.7 154 44.8
Atru.chr7.1988 Acer truncatum HOM05D003288 ORTHO05D003734 6.0e-29 132.1 248 30.6
FAN09G2221 Fragaria x ananassa HOM05D003288 ORTHO05D003734 6.0e-29 132.1 191 40.3
Sp6g17370 Schrenkiella parvula HOM05D003288 ORTHO05D003734 1.0e-28 131.3 122 47.5
EL10Ac6g15375 Beta vulgaris HOM05D003288 ORTHO05D003734 3.9e-28 129.4 249 33.7
EL10Ac6g15379 Beta vulgaris HOM05D003288 ORTHO05D003734 3.9e-28 129.4 249 33.7
Gorai.008G159700 Gossypium raimondii HOM05D003288 ORTHO05D003734 3.9e-28 129.4 148 41.9
FAN02G4572 Fragaria x ananassa HOM05D003288 ORTHO05D003734 4.3e-27 125.9 113 54.0
RcHm_v2.0_Chr2g0157531 Rosa chinensis HOM05D003288 ORTHO05D003734 5.6e-27 125.6 224 35.3
QL08p029080 Quercus lobata HOM05D003288 ORTHO05D003734 9.6e-27 124.8 201 36.8
Peaxi162Scf00120g00813 Petunia axillaris HOM05D003288 ORTHO05D003734 6.2e-26 122.1 248 36.3
Mapoly0046s0117 Marchantia polymorpha HOM05D003288 ORTHO05D003734 3.4e-24 116.3 127 46.5
Medtr4g009310 Medicago truncatula HOM05D003288 ORTHO05D003734 2.9e-23 113.2 84 59.5
AUR62003503 Chenopodium quinoa HOM05D003288 ORTHO05D003734 6.5e-23 112.1 247 31.6
BcaC01g06370 Brassica carinata HOM05D003288 ORTHO05D003734 8.4e-23 111.7 121 44.6
CSS0001357 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 2.5e-22 110.2 168 38.1
DCAR_004634 Daucus carota HOM05D003288 ORTHO05D003734 4.6e-21 105.9 260 30.8
Pp3c8_19560 Physcomitrium patens HOM05D003288 ORTHO05D003734 1.9e-19 100.5 134 38.1
MELO3C019570.2 Cucumis melo HOM05D003288 ORTHO05D003734 3.3e-19 99.8 93 48.4
ClCG05G010510 Citrullus lanatus HOM05D003288 ORTHO05D003734 5.7e-19 99.0 89 50.6
CsaV3_3G017990 Cucumis sativus L. HOM05D003288 ORTHO05D003734 3.4e-16 89.7 138 40.6
CBR_g12548 Chara braunii HOM05D003288 ORTHO05D003734 4.5e-16 89.4 213 30.5
SGA_v2.0_scaffold79G25577 Striga asiatica HOM05D003288 ORTHO05D003734 7.7e-16 88.6 138 40.6
Psat0s1991g0040 Pisum sativum HOM05D003288 ORTHO05D003734 3.8e-15 86.3 86 46.5
ECA240G2483 Erigeron canadensis HOM05D003288 ORTHO05D003734 9.4e-14 81.6 114 40.4
Oeu048956.1 Olea europaea HOM05D003288 ORTHO05D003734 8.2e-10 68.6 240 25.0
VMungo0331G0214 Vigna mungo HOM05D003288 ORTHO05D003734 2.4e-09 67.0 145 30.3
Sopen11g002220 Solanum pennellii HOM05D003288 ORTHO05D003734 3.1e-09 66.6 89 41.6
AagrBONN_evm.TU.Sc2ySwM_228.118 Anthoceros agrestis HOM05D003288 ORTHO05D003734 2.2e-07 60.5 123 33.3
ClCG05G010520 Citrullus lanatus HOM05D003288 ORTHO05D003734 7.2e-06 55.5 112 33.0


User provided reference genes

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