Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.5e-231 805.8 398 100.0
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 4.9e-211 737.6 493 78.3
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 3.0e-144 515.8 487 56.7
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 2.2e-142 509.6 442 59.5
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 2.4e-141 506.1 478 57.7
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 5.9e-140 501.5 487 55.9
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 8.5e-139 497.7 493 55.0
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 3.2e-138 495.7 489 55.2
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 6.7e-136 488.0 465 54.6
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 7.7e-132 474.6 485 53.2
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 7.7e-132 474.6 464 54.7
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 7.7e-132 474.6 442 55.0
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 1.3e-131 473.8 465 54.6
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.7e-131 473.4 487 53.6
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 3.8e-131 472.2 442 54.8
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 5.0e-131 471.9 488 53.7
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 6.5e-131 471.5 485 52.2
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 8.5e-131 471.1 469 53.1
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.5e-130 470.3 469 53.5
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.5e-130 470.3 437 55.8
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 1.9e-130 469.9 484 53.3
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.9e-130 469.9 435 56.1
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 4.2e-130 468.8 481 51.8
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 7.2e-130 468.0 444 55.2
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.6e-129 466.8 437 55.8
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.6e-129 466.8 437 55.8
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 2.7e-129 466.1 440 55.7
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 2.7e-129 466.1 479 52.2
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 4.7e-129 465.3 464 53.7
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 4.7e-129 465.3 437 55.6
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 8.0e-129 464.5 439 54.7
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 8.0e-129 464.5 440 55.2
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 8.0e-129 464.5 463 53.6
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.4e-128 463.8 462 53.5
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 2.3e-128 463.0 469 52.2
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 3.0e-128 462.6 433 54.7
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 4.0e-128 462.2 465 52.0
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 5.2e-128 461.8 463 53.3
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 6.8e-128 461.5 443 54.6
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 8.8e-128 461.1 437 54.5
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 1.2e-127 460.7 463 52.9
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 3.4e-127 459.1 483 52.6
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.4e-127 458.8 445 54.8
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 2.2e-126 456.4 458 52.6
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 6.3e-126 454.9 462 52.2
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 6.3e-126 454.9 426 57.7
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 8.3e-126 454.5 445 54.2
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 1.1e-125 454.1 463 51.6
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 1.6e-124 450.3 430 54.4
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 7.7e-124 448.0 481 51.1
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 1.7e-123 446.8 445 52.4
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 2.9e-123 446.0 435 53.6
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 5.0e-123 445.3 437 53.3
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 1.2e-121 440.7 467 51.6
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 2.1e-121 439.9 447 52.1
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 6.1e-121 438.3 455 51.4
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.8e-120 436.8 373 60.1
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 1.8e-120 436.8 461 50.8
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 4.0e-120 435.6 485 48.9
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 6.8e-120 434.9 438 53.4
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.2e-119 434.1 388 56.7
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 2.0e-119 433.3 488 48.4
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 2.0e-119 433.3 450 50.7
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 2.0e-119 433.3 437 51.7
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 2.0e-119 433.3 437 51.7
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 2.0e-119 433.3 437 51.7
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 2.6e-119 433.0 437 51.7
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.6e-119 433.0 450 51.3
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 5.7e-119 431.8 468 49.6
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 7.5e-119 431.4 448 51.3
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 9.8e-119 431.0 386 55.4
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 9.8e-119 431.0 487 48.9
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.3e-118 430.6 487 48.5
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 3.7e-118 429.1 450 50.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.1e-117 427.6 442 50.9
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 1.4e-117 427.2 485 48.5
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 3.1e-117 426.0 436 51.6
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 5.4e-117 425.2 433 52.2
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 3.5e-116 422.5 393 55.2
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 7.7e-116 421.4 468 48.3
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.1e-114 417.5 386 55.7
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 3.6e-113 412.5 387 54.3
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 4.7e-113 412.1 391 54.2
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 4.0e-112 409.1 365 57.0
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 4.0e-112 409.1 440 50.7
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 6.8e-112 408.3 244 77.5
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.3e-110 404.1 444 49.5
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 4.1e-109 399.1 456 48.7
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.9e-106 390.2 484 43.4
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 2.8e-105 386.3 443 46.0
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 3.1e-104 382.9 435 47.4
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 1.5e-103 380.6 480 46.0
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.7e-102 377.1 372 54.3
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 7.0e-101 371.7 434 49.1
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 2.3e-99 366.7 213 79.3
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.9e-99 365.9 244 70.9
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 3.2e-93 346.3 372 47.6
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 1.3e-75 287.7 321 50.2
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 9.6e-74 281.6 225 63.6
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 7.3e-66 255.4 254 49.6
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 7.1e-61 238.8 155 72.9
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.1e-56 224.9 239 46.4
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.3e-49 201.4 293 39.2
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 2.9e-46 190.3 317 39.1
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 3.7e-33 146.7 220 39.1
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 7.7e-31 139.0 266 32.3
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 2.9e-30 137.1 123 54.5
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 3.3e-26 123.6 237 34.2
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.3e-25 121.7 70 75.7
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.8e-24 117.9 80 68.8
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 9.1e-24 115.5 126 51.6
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.6e-23 114.8 69 78.3
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 5.9e-23 112.8 80 71.2
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 2.7e-20 104.0 151 45.7
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 4.0e-19 100.1 135 46.7
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 6.7e-19 99.4 88 55.7
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 2.7e-12 77.4 98 44.9
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 7.7e-07 59.3 67 40.3


User provided reference genes

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