Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 6.4e-185 650.6 326 100.0
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 2.8e-180 635.2 326 97.5
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 8.2e-132 474.2 325 73.8
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 7.7e-130 467.6 324 71.0
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 3.0e-126 455.7 323 71.5
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 9.8e-125 450.7 322 70.2
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 2.2e-124 449.5 310 71.6
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 9.1e-123 444.1 312 70.5
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 9.1e-123 444.1 312 70.5
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 2.0e-122 443.0 310 71.3
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 2.7e-122 442.6 321 69.5
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 3.5e-122 442.2 310 70.0
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 4.5e-122 441.8 311 69.8
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 1.0e-121 440.7 321 69.2
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 1.0e-121 440.7 313 69.3
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 1.0e-121 440.7 319 69.3
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.3e-121 440.3 322 68.9
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 1.3e-121 440.3 309 71.2
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 2.3e-121 439.5 305 71.8
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 3.2e-120 435.6 319 68.7
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 3.2e-120 435.6 310 70.6
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 4.2e-120 435.3 328 66.5
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 5.5e-120 434.9 324 67.3
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 5.5e-120 434.9 304 71.7
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 7.2e-120 434.5 324 67.0
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 9.5e-120 434.1 323 68.1
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 2.1e-119 433.0 328 66.8
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.8e-119 432.6 325 68.0
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 3.6e-119 432.2 328 67.7
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 6.1e-119 431.4 322 66.5
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 6.1e-119 431.4 324 68.8
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 8.0e-119 431.0 322 67.7
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 1.4e-118 430.3 324 68.5
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 1.8e-118 429.9 311 68.8
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 2.3e-118 429.5 326 66.3
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 2.3e-118 429.5 313 67.7
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 5.2e-118 428.3 311 68.5
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 2.0e-117 426.4 324 67.9
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 3.4e-117 425.6 321 67.6
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 5.7e-117 424.9 322 67.1
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 9.8e-117 424.1 331 65.6
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 2.8e-116 422.5 310 68.1
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 4.9e-116 421.8 347 63.1
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 6.3e-116 421.4 307 68.4
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 6.3e-116 421.4 301 69.8
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 8.3e-116 421.0 340 64.4
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 1.4e-115 420.2 311 67.8
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 7.0e-115 417.9 325 66.2
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 9.2e-115 417.5 303 68.0
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 1.6e-114 416.8 321 66.4
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 3.5e-114 415.6 324 64.2
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 3.5e-114 415.6 340 64.1
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 4.5e-114 415.2 274 75.9
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 1.3e-113 413.7 321 65.4
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 1.7e-113 413.3 310 67.7
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 3.8e-113 412.1 322 66.1
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 8.6e-113 411.0 326 64.7
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 8.6e-113 411.0 311 66.6
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 1.9e-112 409.8 327 62.7
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 4.3e-112 408.7 270 75.2
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.6e-111 406.8 392 57.1
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 2.1e-111 406.4 324 61.1
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 3.6e-111 405.6 327 61.5
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 3.6e-111 405.6 322 64.3
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 6.1e-111 404.8 326 61.0
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 8.0e-111 404.4 323 61.3
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 1.4e-110 403.7 327 60.9
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 1.4e-110 403.7 326 62.0
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 1.4e-110 403.7 315 62.5
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 1.4e-110 403.7 326 61.3
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 2.3e-110 402.9 311 65.3
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 2.3e-110 402.9 352 60.8
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 4.0e-110 402.1 273 74.0
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 8.9e-110 401.0 326 60.1
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 1.2e-109 400.6 308 65.3
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 1.2e-109 400.6 313 65.5
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 1.5e-109 400.2 310 65.8
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.0e-109 399.8 334 62.6
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 2.0e-109 399.8 324 61.7
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 3.4e-109 399.1 325 62.2
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 3.4e-109 399.1 315 62.5
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 7.5e-109 397.9 348 61.2
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 8.3e-108 394.4 326 61.0
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 1.8e-107 393.3 319 64.9
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 2.4e-107 392.9 308 64.3
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 5.4e-107 391.7 308 64.6
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 7.0e-107 391.3 303 65.0
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 2.0e-106 389.8 308 64.3
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 2.0e-106 389.8 302 66.6
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 7.8e-106 387.9 275 70.2
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 1.3e-105 387.1 308 64.0
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 3.0e-105 386.0 289 67.8
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 3.0e-105 386.0 308 63.6
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 5.0e-105 385.2 308 63.3
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 6.6e-105 384.8 331 60.7
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 1.9e-104 383.3 302 64.6
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 5.6e-104 381.7 353 55.5
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 7.3e-104 381.3 308 63.3
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 9.5e-104 380.9 276 69.2
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 1.2e-103 380.6 304 64.8
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 3.6e-103 379.0 255 74.5
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 8.0e-103 377.9 334 59.6
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 1.4e-102 377.1 313 61.7
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 1.8e-102 376.7 274 68.2
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 6.8e-102 374.8 307 62.2
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 1.2e-101 374.0 369 54.7
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 2.0e-101 373.2 308 62.3
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 2.0e-101 373.2 307 61.2
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 2.9e-100 369.4 285 66.3
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 6.4e-100 368.2 307 60.9
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.3e-100 367.9 314 62.7
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 7.0e-99 364.8 308 61.0
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 9.2e-99 364.4 325 58.2
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 1.7e-97 360.1 325 60.3
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 5.0e-97 358.6 307 56.0
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 1.9e-96 356.7 256 69.1
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 5.2e-94 348.6 237 70.0
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 2.9e-92 342.8 309 56.6
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 3.7e-92 342.4 318 57.2
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 4.9e-92 342.0 306 57.2
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.0e-89 334.3 322 55.3
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 5.8e-85 318.5 315 57.5
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 2.9e-84 316.2 231 68.0
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.5e-80 303.1 324 51.2
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 9.6e-80 301.2 227 67.4
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 5.8e-77 292.0 307 53.4
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.2e-74 284.3 457 41.6
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 1.2e-69 267.7 314 47.1
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 1.3e-68 264.2 202 65.3
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 5.1e-65 252.3 184 67.9
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 8.1e-63 245.0 213 59.6
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 4.0e-62 242.7 354 39.3
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 2.6e-61 240.0 171 69.6
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 4.5e-61 239.2 186 64.5
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 2.4e-59 233.4 157 72.6
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 2.1e-58 230.3 179 66.5
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 2.1e-58 230.3 268 48.9
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 3.5e-58 229.6 170 67.1
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 6.7e-57 225.3 291 45.4
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 1.9e-56 223.8 382 37.7
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 9.6e-56 221.5 193 57.5
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 2.8e-55 219.9 222 53.6
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 5.3e-54 215.7 217 56.2
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 1.2e-53 214.5 197 53.8
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 7.6e-53 211.8 148 70.3
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.0e-52 211.5 249 46.6
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 2.5e-48 196.8 146 69.9
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 1.3e-47 194.5 227 46.3
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 8.2e-47 191.8 153 62.1
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 8.2e-47 191.8 132 74.2
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.4e-46 190.3 195 53.3
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 9.0e-46 188.3 311 40.8
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 1.4e-43 181.0 139 64.0
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 1.1e-38 164.9 147 55.1
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 2.6e-37 160.2 122 63.1
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 7.7e-37 158.7 118 65.3
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 1.1e-35 154.8 170 44.7
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.1e-32 144.8 183 47.5
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 1.2e-29 134.8 106 65.1
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 4.5e-29 132.9 130 56.9
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.4e-27 127.9 143 50.3
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 2.5e-27 127.1 115 54.8
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 1.2e-21 108.2 117 56.4
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 6.5e-20 102.4 69 71.0
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 2.5e-19 100.5 81 65.4
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 8.8e-17 92.0 81 63.0
Ah.05g170600 Amaranthus hybridus HOM05D003898 ORTHO05D004642 7.5e-16 89.0 93 50.5
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 2.0e-13 80.9 96 47.9
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 2.7e-13 80.5 93 46.2
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 5.0e-12 76.3 45 77.8
QL10p009819 Quercus lobata HOM05D003898 ORTHO05D004642 3.2e-11 73.6 63 63.5
QL08p011560 Quercus lobata HOM05D003898 ORTHO05D004642 2.1e-10 70.9 63 63.5


User provided reference genes

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