Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO447G0101 Papaver somniferum HOM05D004585 ORTHO05D037280 3.5e-106 388.3 194 100.0
PSO478G2622 Papaver somniferum HOM05D004585 ORTHO05D037280 1.5e-51 206.8 129 85.3
PSO173G0033 Papaver somniferum HOM05D004585 ORTHO05D005640 4.0e-09 65.9 33 90.9
PSO675G5749 Papaver somniferum HOM05D004585 ORTHO05D005640 4.0e-09 65.9 33 90.9
PSO717G0039 Papaver somniferum HOM05D004585 ORTHO05D005640 4.0e-09 65.9 33 90.9
PSO210G0756 Papaver somniferum HOM05D004585 ORTHO05D005640 1.5e-08 63.9 33 87.9
Sc09g0005570 Simmondsia chinensis HOM05D004585 ORTHO05D005640 9.9e-08 61.2 33 78.8
Dinv30656 Davidia involucrata HOM05D004585 ORTHO05D005640 1.3e-07 60.8 36 75.0
CDE02G2408 Ceratophyllum demersum HOM05D000251 ORTHO05D002506 1.7e-07 60.5 73 47.9
Cc02_g10240 Coffea canephora HOM05D004585 ORTHO05D005640 1.7e-07 60.5 33 75.8
Rhsim03G0106100 Rhododendron simsii HOM05D004585 ORTHO05D005640 1.7e-07 60.5 33 75.8
vmacro07224 Vaccinium macrocarpon HOM05D004585 ORTHO05D037280 1.7e-07 60.5 33 75.8
vmacro21510 Vaccinium macrocarpon HOM05D004585 ORTHO05D005640 1.7e-07 60.5 33 75.8
CDE04G0123 Ceratophyllum demersum HOM05D004585 ORTHO05D005640 2.2e-07 60.1 73 46.6
COL.COLO4_33895 Corchorus olitorius HOM05D004585 ORTHO05D005640 2.2e-07 60.1 45 62.2
Hma1.2p1_0567F.1_g180100 Hydrangea macrophylla HOM05D004585 ORTHO05D005640 2.9e-07 59.7 33 81.8
QL04p041242 Quercus lobata HOM05D004585 ORTHO05D005640 2.9e-07 59.7 33 81.8
Actinidia18578 Actinidia chinensis HOM05D004585 ORTHO05D005640 3.8e-07 59.3 33 72.7
Dinv20840 Davidia involucrata HOM05D004585 ORTHO05D005640 3.8e-07 59.3 33 78.8
Sabra10G0182000 Salix brachista HOM05D004585 ORTHO05D005640 3.8e-07 59.3 33 75.8
CSS0035600 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 4.9e-07 58.9 171 31.6
Lj9A82T44 Lonicera japonica HOM05D004585 ORTHO05D005640 4.9e-07 58.9 34 76.5
GSVIVG01021851001 Vitis vinifera HOM05D004585 ORTHO05D005640 4.9e-07 58.9 33 78.8
COL.COLO4_14104 Corchorus olitorius HOM05D004585 ORTHO05D005736 6.4e-07 58.5 44 61.4
Duzib128G1105 Durio zibethinus HOM05D004585 ORTHO05D005640 6.4e-07 58.5 36 72.2
Gohir.A13G011400 Gossypium hirsutum HOM05D004585 ORTHO05D005640 6.4e-07 58.5 36 72.2
Gohir.D13G012100 Gossypium hirsutum HOM05D004585 ORTHO05D005640 6.4e-07 58.5 36 72.2
Gorai.013G013300 Gossypium raimondii HOM05D004585 ORTHO05D005640 6.4e-07 58.5 36 72.2
Hund13887 Selenicereus undatus HOM05D004585 ORTHO05D005640 6.4e-07 58.5 33 78.8
Thecc.10G109700 Theobroma cacao HOM05D004585 ORTHO05D005640 6.4e-07 58.5 36 72.2
Thecc.K0008500 Theobroma cacao HOM05D004585 ORTHO05D005640 6.4e-07 58.5 36 72.2
Lj3A931T47 Lonicera japonica HOM05D004585 ORTHO05D005640 8.4e-07 58.2 33 75.8
Actinidia06707 Actinidia chinensis HOM05D004585 ORTHO05D005640 1.1e-06 57.8 33 69.7
CSS0012030 Camellia sinensis var. sinensis HOM05D004585 ORTHO05D005640 1.1e-06 57.8 33 69.7
Aqoxy1G00240 Aquilegia oxysepala HOM05D004585 ORTHO05D005640 1.4e-06 57.4 33 75.8
Cfa011225 Carpinus fangiana HOM05D004585 ORTHO05D005640 1.4e-06 57.4 33 78.8
Cfa013557 Carpinus fangiana HOM05D004585 ORTHO05D005640 1.4e-06 57.4 33 78.8
Haze_02611 Corylus avellana HOM05D004585 ORTHO05D005640 1.4e-06 57.4 33 78.8
Hund06922 Selenicereus undatus HOM05D004585 ORTHO05D005640 1.4e-06 57.4 33 75.8
TAR633G1318 Trochodendron aralioides HOM05D004585 ORTHO05D005640 1.4e-06 57.4 33 72.7
COL.COLO4_27310 Corchorus olitorius HOM05D004585 ORTHO05D005640 1.9e-06 57.0 45 62.2
Lalb_Chr14g0365991 Lupinus albus HOM05D004585 ORTHO05D005640 1.9e-06 57.0 33 78.8
Oeu027977.1 Olea europaea HOM05D004585 ORTHO05D005640 1.9e-06 57.0 33 75.8
Phvul.005G089300 Phaseolus vulgaris HOM05D004585 ORTHO05D005640 1.9e-06 57.0 33 78.8
Potri.010G234800 Populus trichocarpa HOM05D004585 ORTHO05D005640 1.9e-06 57.0 33 72.7
COL.COLO4_17533 Corchorus olitorius HOM05D001240 ORTHO05D002450 2.4e-06 56.6 44 59.1
Lalb_Chr22g0354511 Lupinus albus HOM05D004585 ORTHO05D005640 2.4e-06 56.6 33 78.8
Manes.05G202500 Manihot esculenta HOM05D004585 ORTHO05D005640 2.4e-06 56.6 33 72.7
Ah.03g136890 Amaranthus hybridus HOM05D004585 ORTHO05D005640 3.2e-06 56.2 33 69.7
arahy.Tifrunner.gnm1.ann1.48LUDE Arachis hypogaea HOM05D004585 ORTHO05D005640 3.2e-06 56.2 33 72.7
arahy.Tifrunner.gnm1.ann1.CB8VHN Arachis hypogaea HOM05D004585 ORTHO05D005640 3.2e-06 56.2 33 72.7
Migut.F01706 Erythranthe guttata HOM05D004585 ORTHO05D005640 3.2e-06 56.2 33 72.7
Eucgr.G02711 Eucalyptus grandis HOM05D004585 ORTHO05D005640 3.2e-06 56.2 33 75.8
MD08G1243300 Malus domestica HOM05D004585 ORTHO05D005640 3.2e-06 56.2 33 72.7
TAR633G2635 Trochodendron aralioides HOM05D004585 ORTHO05D005640 3.2e-06 56.2 33 72.7
EL10Ac2g03709 Beta vulgaris HOM05D004585 ORTHO05D005640 4.2e-06 55.8 33 72.7
EL10Ac4g08675 Beta vulgaris HOM05D004585 ORTHO05D005640 4.2e-06 55.8 33 72.7
EL10Ac4g08678 Beta vulgaris HOM05D004585 ORTHO05D005640 4.2e-06 55.8 33 72.7
HanXRQChr10g0319081 Helianthus annuus HOM05D004585 ORTHO05D005640 4.2e-06 55.8 33 78.8
HanXRQChr14g0456901 Helianthus annuus HOM05D004585 ORTHO05D005640 4.2e-06 55.8 33 78.8
Ah.16g102420 Amaranthus hybridus HOM05D004585 ORTHO05D005640 5.4e-06 55.5 33 69.7
ATR0068G115 Amborella trichopoda HOM05D004585 ORTHO05D005640 7.1e-06 55.1 139 33.8
Psat6g221600 Pisum sativum HOM05D004585 ORTHO05D005640 7.1e-06 55.1 33 75.8
SGA_v2.0_scaffold10G05319 Striga asiatica HOM05D004585 ORTHO05D005640 7.1e-06 55.1 33 69.7
SGA_v2.0_scaffold154G37190 Striga asiatica HOM05D004585 ORTHO05D005640 7.1e-06 55.1 33 69.7
SalBow6G2458 Salvia bowleyana HOM05D004585 ORTHO05D005640 9.3e-06 54.7 33 69.7


User provided reference genes

Program Settings