Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 3.7e-42 174.5 90 100.0
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 2.4e-41 171.8 90 97.8
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.0e-35 152.1 90 83.3
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 5.8e-35 150.6 90 81.1
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 7.5e-35 150.2 88 81.8
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 4.9e-34 147.5 87 81.6
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 6.4e-34 147.1 87 81.6
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 6.4e-34 147.1 87 81.6
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 8.3e-34 146.7 90 77.8
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 8.3e-34 146.7 90 77.8
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 8.3e-34 146.7 87 80.5
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 8.3e-34 146.7 87 80.5
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 81.1
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 80.0
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 76.7
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 77.8
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 3.2e-33 144.8 90 76.7
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 3.2e-33 144.8 90 76.7
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 3.2e-33 144.8 90 75.6
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 3.2e-33 144.8 87 78.2
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 4.1e-33 144.4 90 75.6
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 76.7
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 5.4e-33 144.1 86 81.4
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 77.8
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 7.0e-33 143.7 90 75.6
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 7.0e-33 143.7 90 75.6
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 7.0e-33 143.7 90 75.6
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 7.0e-33 143.7 90 75.6
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 7.0e-33 143.7 90 75.6
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 9.2e-33 143.3 88 76.1
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 76.7
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.1e-32 142.1 90 74.4
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 2.1e-32 142.1 90 75.6
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 2.7e-32 141.7 87 79.3
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 2.7e-32 141.7 90 72.2
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 3.5e-32 141.4 90 77.8
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 4.6e-32 141.0 90 75.6
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 74.4
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 75.6
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 75.6
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 74.4
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 73.3
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 71.1
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 1.0e-31 139.8 89 78.7
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 72.2
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 71.1
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.3e-31 138.7 88 75.0
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 72.2
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 73.3
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 72.2
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 72.2
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 73.3
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 5.1e-31 137.5 90 71.1
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 6.6e-31 137.1 90 73.3
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 8.6e-31 136.7 90 72.2
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 8.6e-31 136.7 100 69.0
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 8.6e-31 136.7 90 72.2
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.1e-30 136.3 97 69.1
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 73.3
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.5e-30 136.0 86 74.4
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 1.9e-30 135.6 90 71.1
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 1.9e-30 135.6 90 72.2
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 2.5e-30 135.2 88 71.6
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 71.1
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 3.3e-30 134.8 88 71.6
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 3.3e-30 134.8 89 74.2
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 73.3
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 71.1
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 72.2
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 5.6e-30 134.0 91 71.4
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 5.6e-30 134.0 91 71.4
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 7.3e-30 133.7 89 69.7
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 68.9
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 70.0
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 1.2e-29 132.9 89 73.0
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.6e-29 132.5 90 68.9
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.6e-29 132.5 88 69.3
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 3.6e-29 131.3 87 71.3
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.6e-29 131.3 90 67.8
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 6.2e-29 130.6 91 70.3
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 6.2e-29 130.6 87 70.1
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 6.2e-29 130.6 84 72.6
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 6.2e-29 130.6 88 70.5
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 6.2e-29 130.6 90 72.2
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 8.1e-29 130.2 90 71.1
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.4e-28 129.4 90 70.0
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 1.4e-28 129.4 90 67.8
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.8e-28 129.0 88 64.8
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 2.3e-28 128.6 94 67.0
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 3.1e-28 128.3 90 66.7
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.0e-28 127.9 90 64.4
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 5.2e-28 127.5 87 69.0
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 3.4e-27 124.8 86 68.6
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 9.9e-27 123.2 88 64.8
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 3.7e-26 121.3 84 70.2
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 6.4e-26 120.6 87 65.5
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 1.4e-25 119.4 90 64.4
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 4.1e-25 117.9 124 50.8
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 5.4e-25 117.5 97 63.9
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 3.5e-24 114.8 72 73.6
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 2.3e-23 112.1 70 74.3
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 3.0e-23 111.7 71 77.5
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 6.6e-23 110.5 86 64.0
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 6.6e-23 110.5 70 78.6
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 8.6e-23 110.2 86 62.8
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 3.3e-22 108.2 70 71.4
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 5.6e-22 107.5 63 76.2
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 6.2e-21 104.0 69 69.6
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 8.1e-21 103.6 66 74.2
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 5.2e-20 100.9 63 73.0
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 8.9e-20 100.1 68 70.6
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.7e-18 95.9 69 66.7
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.2e-18 95.5 57 77.2
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 3.8e-18 94.7 72 61.1
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 4.9e-18 94.4 60 75.0
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 2.1e-16 89.0 89 50.6
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 4.6e-16 87.8 71 67.6
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 6.6e-15 84.0 77 59.7
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 1.1e-14 83.2 93 46.2
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.9e-14 82.4 66 65.2
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 2.2e-10 68.9 90 44.4
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 2.9e-10 68.6 53 64.2
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.8e-08 60.5 47 61.7
AUR62016546 Chenopodium quinoa HOM05D006090 ORTHO05D007600 7.3e-06 53.9 51 56.9


User provided reference genes

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