Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 1.4e-297 1025.8 637 100.0
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.5e-52 211.8 637 34.1
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.4e-50 205.3 345 44.9
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 2.4e-50 204.5 373 44.0
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.5e-49 201.8 323 47.1
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 1.0e-48 199.1 447 37.8
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 2.9e-48 197.6 393 39.9
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 3.2e-47 194.1 434 41.7
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 1.6e-46 191.8 414 39.4
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 7.9e-46 189.5 445 36.9
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.4e-45 188.7 627 32.5
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 1.7e-43 181.8 321 45.5
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 3.1e-42 177.6 447 37.4
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 4.1e-42 177.2 319 44.2
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 5.3e-42 176.8 378 39.9
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 9.1e-42 176.0 347 42.1
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 1.2e-41 175.6 451 37.5
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 2.0e-41 174.9 355 41.7
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.0e-41 174.9 385 38.2
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 1.0e-40 172.6 421 37.3
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.8e-40 170.6 314 43.0
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 6.5e-40 169.9 371 38.8
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 1.1e-39 169.1 319 42.3
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 1.4e-39 168.7 373 38.6
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 1.9e-39 168.3 422 37.0
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 2.5e-39 167.9 314 42.7
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 3.2e-39 167.5 440 38.4
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.2e-38 165.6 438 37.0
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 1.6e-38 165.2 392 38.0
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 2.1e-38 164.9 371 40.7
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 2.1e-38 164.9 362 39.2
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 6.1e-38 163.3 361 39.9
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 7.9e-38 162.9 389 39.3
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 7.9e-38 162.9 403 38.5
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 7.9e-38 162.9 317 42.3
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.0e-37 162.5 371 38.5
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.4e-37 162.2 328 42.7
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 1.8e-37 161.8 426 38.3
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 1.8e-37 161.8 421 37.3
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 1.8e-37 161.8 359 38.4
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.3e-37 161.4 628 29.9
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 3.0e-37 161.0 317 43.2
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 6.7e-37 159.8 341 40.8
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 8.8e-37 159.5 392 37.0
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 2.0e-36 158.3 343 40.5
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 2.0e-36 158.3 322 42.2
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 3.3e-36 157.5 324 41.7
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 4.4e-36 157.1 422 36.0
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 7.4e-36 156.4 326 42.0
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 7.4e-36 156.4 362 39.2
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 1.3e-35 155.6 403 36.2
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 2.8e-35 154.5 371 40.2
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 4.8e-35 153.7 327 40.1
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 6.3e-35 153.3 413 37.0
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.1e-34 152.5 310 41.9
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 1.4e-34 152.1 419 35.6
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 1.4e-34 152.1 348 40.2
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 2.4e-34 151.4 406 38.2
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 2.4e-34 151.4 318 40.9
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 2.4e-34 151.4 346 40.5
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 2.4e-34 151.4 374 39.0
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 9.1e-34 149.4 329 40.4
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 1.6e-33 148.7 322 39.1
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 2.0e-33 148.3 328 40.2
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.0e-33 148.3 628 29.8
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 3.5e-33 147.5 317 39.7
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.3e-32 145.6 309 40.1
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 1.3e-32 145.6 362 37.0
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 1.7e-32 145.2 302 40.7
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 1.7e-32 145.2 345 40.3
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 8.5e-32 142.9 351 38.7
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 2.5e-31 141.4 346 38.4
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 2.5e-31 141.4 418 32.5
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 4.2e-31 140.6 345 40.0
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 1.6e-30 138.7 323 37.5
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 1.6e-30 138.7 343 39.9
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 3.6e-30 137.5 331 37.5
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 1.4e-29 135.6 370 38.4
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 1.4e-29 135.6 341 39.6
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 2.3e-29 134.8 321 37.7
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 8.8e-29 132.9 369 36.6
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 9.7e-28 129.4 331 39.0
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 2.2e-27 128.3 324 38.0
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 4.8e-27 127.1 331 36.3
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 3.1e-26 124.4 346 35.5
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 4.1e-26 124.0 294 37.4
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.2e-25 122.5 426 31.9
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 1.2e-25 122.5 335 36.4
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.6e-25 122.1 311 37.3
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 2.7e-25 121.3 331 34.4
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 7.7e-25 119.8 321 35.2
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 2.2e-24 118.2 420 31.0
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 2.9e-24 117.9 319 35.4
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 2.9e-24 117.9 294 33.0
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 2.9e-24 117.9 294 33.0
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 1.5e-23 115.5 379 32.5
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 5.5e-23 113.6 351 33.3
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 5.5e-23 113.6 350 34.6
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 1.2e-22 112.5 294 33.3
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 1.2e-22 112.5 294 33.3
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 2.7e-22 111.3 294 34.7
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 8.0e-22 109.8 309 36.6
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 1.4e-21 109.0 309 36.6
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 1.4e-21 109.0 309 36.6
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 7.5e-20 103.2 299 36.8
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.7e-19 102.1 340 32.6
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 2.4e-18 98.2 282 31.9
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 2.4e-18 98.2 295 36.3
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 9.1e-18 96.3 300 33.0
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 1.6e-17 95.5 303 33.3
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 2.0e-17 95.1 303 33.3
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 2.0e-17 95.1 327 31.2
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 2.2e-16 91.7 315 35.9
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 3.2e-15 87.8 330 29.4
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 3.2e-15 87.8 304 33.6
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 9.5e-15 86.3 228 36.0
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 8.0e-14 83.2 356 30.3
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 5.2e-13 80.5 219 35.2
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.1e-10 72.8 162 40.1
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 7.0e-10 70.1 270 33.3
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 2.0e-09 68.6 355 29.0
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 8.6e-08 63.2 386 24.4


User provided reference genes

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