Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 8.0e-126 453.8 227 100.0
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 6.4e-123 444.1 222 100.0
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 6.4e-123 444.1 222 100.0
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 6.4e-123 444.1 222 100.0
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 1.3e-115 419.9 209 100.0
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 3.4e-108 395.2 224 89.7
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 1.1e-103 380.2 224 85.7
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.3e-51 207.2 228 53.1
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 6.7e-48 194.9 226 50.0
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 4.1e-45 185.7 227 51.1
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 2.7e-41 172.9 282 40.8
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.0e-40 171.0 227 46.7
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 4.0e-40 169.1 227 45.8
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 5.2e-40 168.7 225 44.9
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 6.7e-40 168.3 227 44.9
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 6.7e-40 168.3 223 46.2
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.4e-39 165.6 219 44.7
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 7.5e-39 164.9 217 45.6
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.3e-38 164.1 227 45.8
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.7e-38 163.7 217 44.7
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 1.7e-38 163.7 217 43.3
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 1.7e-38 163.7 226 45.6
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 4.8e-38 162.2 225 46.2
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.1e-37 161.0 226 43.8
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 1.8e-37 160.2 217 46.1
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 9.1e-37 157.9 216 43.1
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 2.0e-36 156.8 220 44.1
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 2.6e-36 156.4 219 44.3
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 2.6e-36 156.4 229 39.7
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 7.7e-36 154.8 226 37.6
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 1.3e-35 154.1 225 42.7
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 1.3e-35 154.1 221 43.4
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 2.9e-35 152.9 217 42.9
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 6.5e-35 151.8 225 44.4
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 7.2e-34 148.3 218 43.1
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.6e-33 146.0 219 43.8
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 4.7e-33 145.6 219 43.8
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 4.7e-33 145.6 228 42.1
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 6.1e-33 145.2 206 44.2
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 6.1e-33 145.2 223 43.9
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 8.0e-33 144.8 183 51.4
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.0e-32 144.4 179 49.2
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 4.0e-32 142.5 218 42.7
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 4.0e-32 142.5 224 38.8
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 4.0e-32 142.5 223 38.6
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 5.2e-32 142.1 229 40.6
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 8.8e-32 141.4 222 41.0
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 1.2e-31 141.0 223 42.2
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 2.6e-31 139.8 218 41.3
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 9.8e-31 137.9 232 40.5
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.2e-30 136.7 228 39.0
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 2.8e-30 136.3 211 41.7
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 4.8e-30 135.6 223 39.5
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 6.3e-30 135.2 223 40.4
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.1e-29 134.4 229 39.3
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.4e-29 134.0 226 38.9
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 2.4e-29 133.3 219 42.5
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 1.6e-28 130.6 215 39.5
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 2.7e-28 129.8 235 37.0
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 4.5e-28 129.0 225 38.7
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 5.9e-28 128.6 230 38.7
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 5.9e-28 128.6 225 39.1
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 5.9e-28 128.6 226 38.1
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 7.7e-28 128.3 175 47.4
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 1.0e-27 127.9 219 37.0
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.3e-27 127.5 226 37.2
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-27 127.5 226 37.2
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.3e-27 127.5 191 41.4
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 2.2e-27 126.7 227 37.0
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 2.9e-27 126.3 222 37.8
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 2.9e-27 126.3 224 34.8
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 6.5e-27 125.2 225 37.3
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 8.5e-27 124.8 220 36.8
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 1.5e-26 124.0 223 36.3
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 3.2e-26 122.9 219 34.7
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 7.2e-26 121.7 228 36.0
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 2.7e-25 119.8 224 37.9
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.4e-24 117.5 218 37.2
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.3e-24 116.7 165 46.1
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 3.4e-23 112.8 228 35.1
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 3.4e-23 112.8 225 36.9
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 5.7e-23 112.1 226 31.4
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 7.5e-23 111.7 178 42.1
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.3e-22 110.9 224 34.8
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 8.3e-22 108.2 203 32.0
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 2.4e-21 106.7 234 31.6
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 3.1e-21 106.3 225 34.7
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.6e-20 104.0 217 36.9
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 2.0e-20 103.6 217 36.4
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 7.7e-20 101.7 218 34.4
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 7.7e-20 101.7 202 33.7
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 8.6e-19 98.2 226 33.6
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 8.6e-19 98.2 221 33.0
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 3.3e-18 96.3 216 35.2
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 3.3e-18 96.3 224 33.9
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 3.3e-18 96.3 222 31.1
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 4.3e-18 95.9 220 34.5
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 9.5e-18 94.7 223 33.6
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 9.5e-18 94.7 218 34.4
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 9.5e-18 94.7 200 32.0
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 1.2e-17 94.4 215 34.0
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 8.0e-17 91.7 217 33.6
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.0e-16 91.3 217 34.6
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.3e-16 90.1 218 33.9
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 2.3e-16 90.1 220 34.1
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 4.0e-16 89.4 218 33.0
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 1.2e-15 87.8 187 34.8
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 2.0e-15 87.0 219 34.2
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 2.0e-15 87.0 218 33.0
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 2.0e-15 87.0 168 33.3
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 3.4e-15 86.3 221 28.5
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 7.5e-15 85.1 102 44.1
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 9.8e-15 84.7 263 27.8
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.3e-14 84.3 219 27.9
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 1.3e-14 84.3 99 47.5
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 6.4e-14 82.0 233 31.8
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 6.4e-14 82.0 219 27.9
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 7.0e-13 78.6 219 33.3
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 2.7e-12 76.6 113 38.9
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 1.1e-10 71.2 103 41.7
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.2e-09 67.8 103 37.9
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 2.3e-08 63.5 62 48.4
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 2.0e-07 60.5 213 23.0
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 1.3e-06 57.8 145 33.1


User provided reference genes

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