Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 8.3e-142 506.9 235 100.0
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 4.1e-109 398.3 232 77.2
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 6.0e-108 394.4 235 75.7
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 1.1e-106 390.2 228 77.2
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 1.4e-104 383.3 228 74.6
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 4.0e-104 381.7 230 72.6
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 2.2e-102 375.9 228 74.1
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 3.8e-102 375.2 224 75.4
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 6.4e-102 374.4 224 74.6
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 6.4e-102 374.4 228 73.7
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 1.4e-101 373.2 232 71.6
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 2.4e-101 372.5 223 74.4
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 3.2e-101 372.1 222 75.2
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 7.1e-101 370.9 224 74.6
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.6e-100 369.8 228 73.2
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 1.6e-100 369.8 234 70.5
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.6e-100 369.8 231 71.9
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 2.1e-100 369.4 232 70.7
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.7e-100 369.0 224 74.1
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 1.7e-99 366.3 233 72.1
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.0e-99 365.5 222 74.3
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 3.0e-99 365.5 236 69.5
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 8.7e-99 364.0 225 71.6
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 1.9e-98 362.8 225 71.6
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 9.6e-98 360.5 235 67.7
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.6e-97 359.8 228 70.2
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 2.1e-97 359.4 234 70.5
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 1.4e-96 356.7 222 72.5
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 2.4e-96 355.9 228 69.3
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 9.0e-96 354.0 228 68.9
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 9.0e-96 354.0 232 70.3
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 3.8e-94 348.6 211 73.5
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 8.4e-94 347.4 224 69.6
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 1.1e-93 347.1 221 70.1
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 1.1e-93 347.1 221 70.1
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 3.2e-93 345.5 225 67.1
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 2.1e-92 342.8 227 67.4
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 2.1e-92 342.8 224 68.3
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 2.7e-92 342.4 233 65.7
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 3.5e-92 342.0 221 68.8
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 6.0e-92 341.3 288 56.2
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.7e-91 339.7 229 67.7
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 3.9e-91 338.6 224 68.3
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 1.1e-90 337.0 251 62.2
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 1.1e-90 337.0 225 68.9
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 1.3e-89 333.6 247 62.8
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 2.0e-87 326.2 225 66.2
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 2.6e-87 325.9 230 65.7
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 7.6e-87 324.3 221 65.6
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 1.7e-86 323.2 224 61.6
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 4.2e-85 318.5 225 64.4
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 2.1e-84 316.2 221 65.2
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 3.0e-83 312.4 222 64.0
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 6.7e-83 311.2 222 64.4
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 4.8e-81 305.1 235 59.1
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 1.4e-80 303.5 222 61.3
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 5.3e-80 301.6 236 60.6
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 1.2e-79 300.4 205 63.9
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 3.4e-79 298.9 226 61.5
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 1.1e-77 293.9 224 59.8
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 7.1e-77 291.2 229 61.1
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 1.0e-75 287.3 224 56.2
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 3.9e-75 285.4 176 74.4
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 4.3e-74 282.0 236 57.6
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 3.7e-73 278.9 221 55.7
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 3.1e-72 275.8 225 55.1
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 5.3e-72 275.0 233 57.1
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 6.9e-72 274.6 180 71.7
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 1.5e-71 273.5 146 87.0
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 7.6e-71 271.2 225 54.2
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 5.0e-70 268.5 225 53.8
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 5.0e-70 268.5 220 55.5
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 3.5e-68 262.3 218 54.1
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.8e-67 260.0 156 77.6
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 3.3e-66 255.8 233 54.1
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 1.0e-62 244.2 170 62.9
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 7.2e-61 238.0 221 52.5
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 6.3e-49 198.4 123 71.5
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 7.0e-48 194.9 199 48.7
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 9.1e-48 194.5 122 70.5
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 3.5e-47 192.6 110 79.1
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.7e-46 190.3 131 64.1
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 1.0e-43 181.0 102 79.4
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 2.6e-42 176.4 132 57.6
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 6.3e-41 171.8 194 44.8
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.7e-30 137.1 122 54.9
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 3.5e-23 112.8 215 35.3
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 4.7e-20 102.4 69 55.1
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 6.1e-20 102.1 106 53.8
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 6.8e-19 98.6 86 54.7
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 2.0e-18 97.1 85 48.2
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.2e-15 87.8 60 61.7
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 5.9e-15 85.5 79 40.5
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 1.6e-07 60.8 51 62.7
AL3G33970 Arabidopsis lyrata HOM05D007715 ORTHO05D009760 7.8e-07 58.5 49 53.1


User provided reference genes

Program Settings